Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4345

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,196,251	+		Echvi_4344	0.36	-0.3
5,196,273	+		Echvi_4344	0.38	-3.7
5,196,286	-		Echvi_4344	0.39	-2.0
5,196,329	-		Echvi_4344	0.41	-0.2
5,196,329	-		Echvi_4344	0.41	-1.1
5,196,329	-		Echvi_4344	0.41	+1.3
5,196,344	-		Echvi_4344	0.43	+1.2
5,196,344	-		Echvi_4344	0.43	-1.3
5,196,344	-		Echvi_4344	0.43	-1.4
5,196,347	+		Echvi_4344	0.43	-0.1
5,196,348	-		Echvi_4344	0.43	-0.7
5,196,422	+		Echvi_4344	0.48	-0.3
5,196,504	-		Echvi_4344	0.53	-1.8
5,196,535	+		Echvi_4344	0.55	-0.8
5,196,535	+		Echvi_4344	0.55	+0.5
5,196,629	+		Echvi_4344	0.62	+0.1
5,196,629	+		Echvi_4344	0.62	-1.9
5,196,630	-		Echvi_4344	0.62	-0.3
5,196,701	-		Echvi_4344	0.66	+2.2
5,196,701	-		Echvi_4344	0.66	-0.8
5,196,755	+		Echvi_4344	0.70	-0.7
5,196,755	+		Echvi_4344	0.70	+1.5
5,196,755	+		Echvi_4344	0.70	-0.9
5,196,756	-		Echvi_4344	0.70	+0.5
5,196,756	-		Echvi_4344	0.70	+1.2
5,196,756	-		Echvi_4344	0.70	-0.2
5,196,757	+		Echvi_4344	0.70	+0.9
5,196,761	-		Echvi_4344	0.70	+1.1
5,196,761	-		Echvi_4344	0.70	-0.3
5,196,779	+		Echvi_4344	0.72	-0.1
5,196,781	+		Echvi_4344	0.72	-0.6
5,196,782	-		Echvi_4344	0.72	-2.6
5,196,782	-		Echvi_4344	0.72	-0.6
5,196,841	+		Echvi_4344	0.76	-1.1
5,196,841	+		Echvi_4344	0.76	-0.4
5,196,841	+		Echvi_4344	0.76	-1.0
5,196,841	+		Echvi_4344	0.76	+0.2
5,196,841	+		Echvi_4344	0.76	-1.2
5,196,841	+		Echvi_4344	0.76	+0.1
5,196,841	+		Echvi_4344	0.76	-0.2
5,196,841	+		Echvi_4344	0.76	-1.1
5,196,841	+		Echvi_4344	0.76	+0.3
5,196,841	+		Echvi_4344	0.76	+0.4
5,196,841	+		Echvi_4344	0.76	-1.6
5,196,841	+				-0.2
5,196,841	+		Echvi_4344	0.76	-0.1
5,196,841	+		Echvi_4344	0.76	+0.3
5,196,841	+		Echvi_4344	0.76	-0.0
5,196,841	+		Echvi_4344	0.76	-1.2
5,196,842	-		Echvi_4344	0.76	-2.0
5,196,842	-		Echvi_4344	0.76	+0.3
5,196,842	-		Echvi_4344	0.76	-0.5
5,196,842	-		Echvi_4344	0.76	+0.2
5,196,842	-		Echvi_4344	0.76	+1.2
5,196,842	-		Echvi_4344	0.76	+0.1
5,196,842	-		Echvi_4344	0.76	-1.8
5,196,842	-		Echvi_4344	0.76	-1.3
5,196,842	-		Echvi_4344	0.76	-0.8
5,196,842	-		Echvi_4344	0.76	-1.9
5,196,842	-		Echvi_4344	0.76	+0.2
5,196,842	-		Echvi_4344	0.76	-0.6
5,196,842	-		Echvi_4344	0.76	-1.3
5,196,842	-		Echvi_4344	0.76	-3.5
5,196,842	-		Echvi_4344	0.76	-0.9
5,196,875	+		Echvi_4344	0.78	-1.7
5,196,876	-		Echvi_4344	0.78	-0.2
5,196,876	-		Echvi_4344	0.78	+2.2
5,196,877	+		Echvi_4344	0.78	-0.0
5,196,877	+		Echvi_4344	0.78	+0.3
5,196,877	+		Echvi_4344	0.78	-0.5
5,196,878	-		Echvi_4344	0.78	-1.6
5,196,878	-		Echvi_4344	0.78	-0.1
5,196,998	+		Echvi_4344	0.86	+0.3
5,197,036	+		Echvi_4344	0.89	-0.0
5,197,036	+		Echvi_4344	0.89	+0.2
5,197,037	-		Echvi_4344	0.89	+0.0
5,197,165	-				-1.7
5,197,179	+				-0.2
5,197,180	-				-0.6
5,197,234	+				-0.3
5,197,234	+				-2.3
5,197,234	+				-0.6
5,197,235	-				-0.2
5,197,311	-				+3.3
5,197,317	+				+0.2
5,197,322	+				+0.5
5,197,322	+				-0.7
5,197,322	+				-0.8
5,197,322	+				+0.1
5,197,322	+				+1.2
5,197,323	-				-1.1
5,197,323	-				-0.2
5,197,325	+				+0.5
5,197,346	+				+0.5
5,197,346	+				-0.7
5,197,347	-				-0.5
5,197,398	+				+0.2
5,197,400	+				-0.7
5,197,401	-				-1.2
5,197,401	-				-0.0
5,197,401	-				-0.3
5,197,430	+				+0.0
5,197,455	+				+0.2
5,197,455	+				+0.1
5,197,455	+				-0.2
5,197,456	-				-1.6
5,197,456	-				-1.2
5,197,499	+				+2.8
5,197,510	+				-0.4
5,197,510	+				+1.2
5,197,580	+		Echvi_4345	0.11	+0.3
5,197,580	+		Echvi_4345	0.11	+1.0
5,197,620	+		Echvi_4345	0.13	-0.1
5,197,621	-		Echvi_4345	0.13	-1.6
5,197,667	+		Echvi_4345	0.14	-1.1
5,197,668	-		Echvi_4345	0.14	-0.4
5,197,710	+		Echvi_4345	0.15	+0.4
5,197,710	+		Echvi_4345	0.15	+0.2
5,197,710	+		Echvi_4345	0.15	-1.3
5,197,721	+		Echvi_4345	0.16	-1.2
5,197,722	-		Echvi_4345	0.16	+0.4
5,197,743	+		Echvi_4345	0.17	+1.4
5,197,824	-		Echvi_4345	0.19	-1.2
5,197,824	-		Echvi_4345	0.19	-0.7
5,197,856	+		Echvi_4345	0.20	-0.0
5,197,858	+		Echvi_4345	0.20	+0.5
5,197,949	+		Echvi_4345	0.23	-1.4
5,197,949	+		Echvi_4345	0.23	+1.4
5,197,949	+		Echvi_4345	0.23	-0.4
5,197,950	-		Echvi_4345	0.23	-0.4
5,197,951	+		Echvi_4345	0.23	-1.6
5,197,951	+		Echvi_4345	0.23	+0.0
5,197,952	-		Echvi_4345	0.23	+2.8
5,197,952	-		Echvi_4345	0.23	-1.6
5,198,013	+		Echvi_4345	0.25	-0.4
5,198,013	+		Echvi_4345	0.25	+0.1
5,198,014	-		Echvi_4345	0.25	+0.8
5,198,021	+		Echvi_4345	0.25	-0.0
5,198,022	-		Echvi_4345	0.25	-1.1
5,198,022	-		Echvi_4345	0.25	-0.3
5,198,081	-		Echvi_4345	0.27	-1.3
5,198,081	-		Echvi_4345	0.27	-0.1
5,198,081	-		Echvi_4345	0.27	+0.9
5,198,130	+		Echvi_4345	0.29	+0.2
5,198,131	-		Echvi_4345	0.29	-1.1
5,198,136	+		Echvi_4345	0.29	-1.6
5,198,190	+		Echvi_4345	0.31	+0.6
5,198,191	-		Echvi_4345	0.31	+0.2
5,198,193	+		Echvi_4345	0.31	+1.1
5,198,193	+		Echvi_4345	0.31	+1.7
5,198,195	+		Echvi_4345	0.31	-1.2
5,198,195	+		Echvi_4345	0.31	-0.2
5,198,195	+		Echvi_4345	0.31	-0.7
5,198,196	-		Echvi_4345	0.31	+0.3
5,198,196	-		Echvi_4345	0.31	-1.9
5,198,196	-		Echvi_4345	0.31	+0.5
5,198,208	+		Echvi_4345	0.31	-0.5
5,198,326	-		Echvi_4345	0.35	-1.6
5,198,328	-		Echvi_4345	0.35	-1.7
5,198,464	+		Echvi_4345	0.39	-0.1
5,198,504	+		Echvi_4345	0.40	+1.0
5,198,504	+		Echvi_4345	0.40	+0.8
5,198,504	+		Echvi_4345	0.40	-1.4
5,198,505	-		Echvi_4345	0.41	-0.0
5,198,537	+		Echvi_4345	0.42	-1.2
5,198,562	-		Echvi_4345	0.42	-1.9
5,198,726	+		Echvi_4345	0.47	+0.8
5,198,727	-		Echvi_4345	0.48	-0.6
5,198,729	+		Echvi_4345	0.48	+0.5
5,198,729	+		Echvi_4345	0.48	+1.3
5,198,780	+		Echvi_4345	0.49	+1.1
5,198,813	+		Echvi_4345	0.50	+1.2
5,198,813	+		Echvi_4345	0.50	-0.2
5,198,870	+		Echvi_4345	0.52	+1.8
5,198,871	-		Echvi_4345	0.52	-2.5
5,198,909	+		Echvi_4345	0.53	-0.6
5,198,909	+		Echvi_4345	0.53	+0.3
5,198,909	+		Echvi_4345	0.53	-1.1
5,198,910	-		Echvi_4345	0.53	+1.4
5,198,912	+		Echvi_4345	0.53	-0.5
5,198,912	+		Echvi_4345	0.53	-2.1
5,198,912	+		Echvi_4345	0.53	-0.6
5,198,912	+		Echvi_4345	0.53	-2.0
5,198,913	-		Echvi_4345	0.53	-0.8
5,198,913	-		Echvi_4345	0.53	-0.0
5,199,024	-		Echvi_4345	0.57	+0.4
5,199,026	-		Echvi_4345	0.57	-0.7
5,199,077	+		Echvi_4345	0.59	-0.1
5,199,077	+		Echvi_4345	0.59	-0.3
5,199,081	-		Echvi_4345	0.59	+0.7
5,199,138	-		Echvi_4345	0.60	+0.2
5,199,179	+		Echvi_4345	0.62	+0.3
5,199,180	-		Echvi_4345	0.62	-0.8
5,199,181	+		Echvi_4345	0.62	-0.6
5,199,181	+		Echvi_4345	0.62	-1.9
5,199,181	+		Echvi_4345	0.62	+0.6
5,199,182	-		Echvi_4345	0.62	+0.5
5,199,182	-		Echvi_4345	0.62	-1.8
5,199,252	+		Echvi_4345	0.64	+0.2
5,199,275	+		Echvi_4345	0.65	-0.5
5,199,276	-		Echvi_4345	0.65	+0.7
5,199,293	+		Echvi_4345	0.65	+0.1
5,199,294	-		Echvi_4345	0.65	+0.6
5,199,294	-		Echvi_4345	0.65	-0.2
5,199,294	-		Echvi_4345	0.65	-2.2
5,199,294	-		Echvi_4345	0.65	+2.8
5,199,294	-		Echvi_4345	0.65	-2.1
5,199,294	-		Echvi_4345	0.65	-0.2
5,199,294	-		Echvi_4345	0.65	-2.0
5,199,294	-		Echvi_4345	0.65	-0.2
5,199,294	-		Echvi_4345	0.65	+0.0
5,199,294	-		Echvi_4345	0.65	+1.2
5,199,442	-		Echvi_4345	0.70	+0.1
5,199,471	-		Echvi_4345	0.71	+0.8
5,199,571	-		Echvi_4345	0.74	-1.0
5,199,592	-		Echvi_4345	0.75	-0.6
5,199,597	-		Echvi_4345	0.75	-0.5
5,199,600	+		Echvi_4345	0.75	-0.4
5,199,600	+		Echvi_4345	0.75	+1.0
5,199,601	-		Echvi_4345	0.75	+1.8
5,199,602	+		Echvi_4345	0.75	+1.0
5,199,652	+		Echvi_4345	0.77	-0.4
5,199,832	+		Echvi_4345	0.82	-0.3
5,199,833	-		Echvi_4345	0.82	+1.8
5,199,833	-		Echvi_4345	0.82	-0.3
5,199,833	-				+0.4
5,199,833	-		Echvi_4345	0.82	+0.3
5,199,833	-		Echvi_4345	0.82	-0.9
5,199,833	-		Echvi_4345	0.82	+0.0
5,199,837	+		Echvi_4345	0.82	-0.2
5,199,838	-		Echvi_4345	0.83	-0.5
5,199,838	-		Echvi_4345	0.83	-0.6
5,199,864	+		Echvi_4345	0.83	-0.8
5,199,886	+		Echvi_4345	0.84	+0.7
5,199,886	+		Echvi_4345	0.84	-0.9
5,199,887	-		Echvi_4345	0.84	-1.7
5,199,921	+		Echvi_4345	0.85	+0.3
5,199,924	+		Echvi_4345	0.85	+0.2
5,199,925	-		Echvi_4345	0.85	-0.9
5,199,952	-		Echvi_4345	0.86	+0.8
5,200,156	+				-0.7
5,200,156	+				-1.1
5,200,156	+				+0.8
5,200,156	+				+0.3
5,200,156	+				-0.2
5,200,157	-				-1.0
5,200,157	-				+0.3
5,200,157	-				-0.6
5,200,157	-				+0.2
5,200,157	-				-0.4
5,200,157	-				+0.6
5,200,157	-				+0.2
5,200,157	-				+0.6
5,200,158	+				+1.3
5,200,158	+				+1.0
5,200,158	+				+0.5
5,200,159	-				+2.0
5,200,161	-				-0.2
5,200,161	-				-0.3
5,200,175	-				+1.3
5,200,372	-				+1.2
5,200,388	+				-0.8
5,200,389	-				-0.1
5,200,393	-				-1.4
5,200,393	-				-0.0
5,200,414	-				-1.4
5,200,427	+				+0.8
5,200,445	+				+0.0
5,200,446	-				-2.6
5,200,458	+				+0.4
5,200,459	-				-2.1
5,200,459	-				-3.1
5,200,459	-				-2.4
5,200,459	-				-2.7
5,200,481	-				-3.2
5,200,481	-				-3.2
5,200,481	-				-0.0
5,200,485	+				+0.4
5,200,490	-				-0.8
5,200,490	-				-1.3
5,200,499	-				-0.5
5,200,524	+				-0.6
5,200,525	-				-1.2
5,200,571	-				-0.6
5,200,571	-				-1.4
5,200,571	-				-1.0
5,200,668	-				+1.0
5,200,670	+				+1.1
5,200,673	+				+0.3
5,200,676	+				-0.6
5,200,676	+				+1.4
5,200,676	+				+0.8
5,200,699	+				-1.3
5,200,700	-				+0.9
5,200,731	+				-0.7
5,200,732	-				-0.0
5,200,766	-				-0.6
5,200,766	-				+0.2
5,200,768	+				+0.1
5,200,769	-				+0.5
5,200,770	+				+0.2
5,200,771	-				-1.0
5,200,771	-				+0.2
5,200,771	-				+1.9
5,200,847	-				+0.6
5,200,906	+				-0.8
5,200,907	-				+1.0
5,200,907	-				-0.6
5,200,907	-				+1.1
5,200,908	+				-1.3
5,200,908	+				-0.8
5,200,909	-				+3.1
5,200,983	+				-0.2
5,200,983	+				+0.2
5,200,983	+				-0.2
5,200,984	-				+0.0
5,200,984	-				-0.2
5,201,016	+				-0.4
5,201,017	-				+0.2
5,201,142	+		Echvi_4346	0.11	+0.4
5,201,142	+		Echvi_4346	0.11	+0.5
5,201,143	-		Echvi_4346	0.11	-0.1
5,201,143	-		Echvi_4346	0.11	-0.2
5,201,144	+		Echvi_4346	0.11	+0.1
5,201,144	+		Echvi_4346	0.11	+0.8
5,201,144	+		Echvi_4346	0.11	+0.7
5,201,144	+		Echvi_4346	0.11	+1.8
5,201,144	+		Echvi_4346	0.11	+0.2
5,201,145	-		Echvi_4346	0.11	-0.7
5,201,145	-		Echvi_4346	0.11	-1.7
5,201,145	-		Echvi_4346	0.11	+0.4
5,201,145	-		Echvi_4346	0.11	-1.4
5,201,146	+		Echvi_4346	0.11	-0.6
5,201,146	+		Echvi_4346	0.11	+0.4
5,201,146	+		Echvi_4346	0.11	+0.3
5,201,146	+		Echvi_4346	0.11	-0.2
5,201,146	+		Echvi_4346	0.11	+0.0
5,201,146	+		Echvi_4346	0.11	-1.6
5,201,146	+		Echvi_4346	0.11	+0.2
5,201,146	+		Echvi_4346	0.11	-0.0
5,201,146	+		Echvi_4346	0.11	+0.1
5,201,146	+		Echvi_4346	0.11	+0.3
5,201,146	+		Echvi_4346	0.11	-0.6
5,201,146	+		Echvi_4346	0.11	-3.2
5,201,147	-		Echvi_4346	0.11	+0.0
5,201,147	-		Echvi_4346	0.11	+0.9
5,201,147	-		Echvi_4346	0.11	+0.3
5,201,147	-		Echvi_4346	0.11	-2.2
5,201,147	-		Echvi_4346	0.11	+1.0
5,201,147	-		Echvi_4346	0.11	+0.7
5,201,147	-		Echvi_4346	0.11	-0.7
5,201,147	-		Echvi_4346	0.11	+0.6
5,201,147	-		Echvi_4346	0.11	-1.6
5,201,147	-		Echvi_4346	0.11	-1.0
5,201,148	+		Echvi_4346	0.11	+0.4
5,201,148	+		Echvi_4346	0.11	-0.1
5,201,149	-		Echvi_4346	0.11	-1.4
5,201,149	-		Echvi_4346	0.11	+0.4
5,201,149	-		Echvi_4346	0.11	-0.4
5,201,154	+		Echvi_4346	0.11	+1.0
5,201,154	+		Echvi_4346	0.11	-1.4
5,201,256	+		Echvi_4346	0.14	+0.2
5,201,267	+		Echvi_4346	0.14	+1.9
5,201,267	+		Echvi_4346	0.14	-1.6
5,201,267	+		Echvi_4346	0.14	-1.8
5,201,267	+		Echvi_4346	0.14	+1.2
5,201,268	-		Echvi_4346	0.14	-0.7
5,201,268	-		Echvi_4346	0.14	+0.3
5,201,268	-		Echvi_4346	0.14	+1.3
5,201,268	-		Echvi_4346	0.14	+0.2
5,201,269	+		Echvi_4346	0.14	-0.1
5,201,269	+		Echvi_4346	0.14	-0.7
5,201,270	-		Echvi_4346	0.14	-0.7
5,201,270	-		Echvi_4346	0.14	+1.8
5,201,270	-		Echvi_4346	0.14	-2.7
5,201,270	-		Echvi_4346	0.14	+0.8
5,201,305	+		Echvi_4346	0.15	+0.2
5,201,306	-		Echvi_4346	0.15	+1.5
5,201,306	-		Echvi_4346	0.15	+0.3
5,201,306	-		Echvi_4346	0.15	-0.0
5,201,306	-		Echvi_4346	0.15	+1.1
5,201,357	+		Echvi_4346	0.16	-0.1
5,201,358	-		Echvi_4346	0.16	+0.4