Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4333

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,178,921	+				+0.8
5,178,921	+				+0.6
5,178,921	+				+0.1
5,178,921	+				+0.3
5,179,058	+				+0.9
5,179,121	-				-1.0
5,179,122	+				-0.4
5,179,150	+				+1.6
5,179,170	+				+0.1
5,179,170	+				-0.0
5,179,204	+				-0.4
5,179,205	-				+0.4
5,179,205	-				-0.8
5,179,224	+				+0.6
5,179,228	+				+0.6
5,179,228	+				-1.6
5,179,236	+				+0.3
5,179,303	+		Echvi_4332	0.17	-0.4
5,179,304	-		Echvi_4332	0.18	-0.5
5,179,304	-		Echvi_4332	0.18	+0.2
5,179,307	+		Echvi_4332	0.18	-0.2
5,179,401	-		Echvi_4332	0.34	-0.3
5,179,401	-		Echvi_4332	0.34	+3.1
5,179,405	-		Echvi_4332	0.35	-0.1
5,179,405	-		Echvi_4332	0.35	+0.9
5,179,435	+		Echvi_4332	0.40	+0.0
5,179,485	+		Echvi_4332	0.49	+0.1
5,179,485	+		Echvi_4332	0.49	+1.1
5,179,485	+		Echvi_4332	0.49	-0.2
5,179,486	-		Echvi_4332	0.49	+0.2
5,179,747	+				-1.4
5,179,747	+				+0.2
5,179,914	+				-0.2
5,179,915	-				+0.6
5,179,917	+				-2.2
5,179,918	-				+2.4
5,179,918	-				+1.4
5,179,953	+				-0.3
5,179,992	+		Echvi_4333	0.12	-1.6
5,179,993	-		Echvi_4333	0.12	-1.8
5,179,993	-		Echvi_4333	0.12	+0.7
5,180,015	+		Echvi_4333	0.15	-0.7
5,180,083	-		Echvi_4333	0.26	+0.8
5,180,086	+		Echvi_4333	0.26	-0.8
5,180,087	-		Echvi_4333	0.26	-0.8
5,180,087	-		Echvi_4333	0.26	+0.2
5,180,087	-		Echvi_4333	0.26	+0.0
5,180,087	-		Echvi_4333	0.26	+0.9
5,180,245	+		Echvi_4333	0.51	-0.1
5,180,283	+		Echvi_4333	0.56	-1.0
5,180,288	+		Echvi_4333	0.57	-0.1
5,180,288	+		Echvi_4333	0.57	-1.1
5,180,339	-		Echvi_4333	0.65	+0.5
5,180,473	+		Echvi_4333	0.86	-0.0
5,180,486	+		Echvi_4333	0.88	+1.6
5,180,493	-		Echvi_4333	0.89	-1.4
5,180,493	-		Echvi_4333	0.89	+0.2
5,180,493	-		Echvi_4333	0.89	+0.4
5,180,556	+				-2.1
5,180,567	+				-0.1
5,180,567	+				-0.7
5,180,568	-				-0.2
5,180,615	+				+0.8
5,180,616	-				-2.1
5,180,616	-				-0.2
5,180,639	+				+0.1
5,180,639	+				-1.4
5,180,640	-				-1.7
5,180,640	-				-0.9
5,180,653	+				+0.8
5,180,678	-				+1.3
5,180,680	-				-0.1
5,180,774	+				+0.3
5,180,774	+				+0.4
5,180,775	-				+0.7
5,180,775	-				+0.3
5,180,775	-				-1.5
5,180,775	-				+0.4
5,180,775	-				-1.1
5,180,775	-				+0.1
5,180,850	+				+2.0
5,180,850	+				+0.0
5,180,850	+				+0.4
5,180,851	-				-2.6
5,180,851	-				-0.5
5,180,851	-				-1.0
5,180,890	+				-1.7
5,180,894	+				-0.1
5,180,894	+				-1.5
5,180,895	-				-0.9
5,180,895	-				-1.1
5,180,895	-				+0.8
5,180,895	-				-0.1
5,180,925	-				+1.9
5,180,957	+		Echvi_4334	0.19	+1.4
5,180,996	-		Echvi_4334	0.34	-0.6
5,181,007	+		Echvi_4334	0.39	-1.4
5,181,099	-		Echvi_4334	0.74	-0.8
5,181,158	+				+0.3
5,181,159	-				+0.8
5,181,170	+				+0.0
5,181,170	+				-0.2
5,181,173	-				-0.1
5,181,195	+				-0.3
5,181,213	-				+0.2
5,181,232	-				-1.2
5,181,245	+				+1.0
5,181,274	+				+1.4
5,181,286	-				+0.2
5,181,289	+				+1.2
5,181,289	+				-0.9
5,181,289	+				+1.2
5,181,289	+				-1.6
5,181,290	-				-0.6
5,181,290	-				-0.2
5,181,290	-				-0.6
5,181,290	-				-0.1
5,181,292	+				+1.9
5,181,293	-				+1.2
5,181,293	-				-0.4
5,181,293	-				+1.9
5,181,295	+				-1.6
5,181,297	+				-1.5
5,181,297	+				+0.1
5,181,298	-				+0.6
5,181,346	+				-1.1
5,181,346	+				+3.1
5,181,347	-				+0.1
5,181,347	-				-0.1
5,181,347	-				-0.6
5,181,347	-				-2.5
5,181,488	+				+0.7
5,181,537	+				+0.3
5,181,538	-				+0.4