Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3977

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,764,447	+		Echvi_3976	0.10	+0.4
4,764,469	+		Echvi_3976	0.18	+0.4
4,764,469	+		Echvi_3976	0.18	-0.5
4,764,509	-		Echvi_3976	0.31	-0.8
4,764,517	+		Echvi_3976	0.33	-1.6
4,764,518	-		Echvi_3976	0.34	-0.8
4,764,521	-		Echvi_3976	0.35	-2.9
4,764,537	+		Echvi_3976	0.40	+0.0
4,764,557	+		Echvi_3976	0.46	+0.2
4,764,558	-		Echvi_3976	0.47	+0.5
4,764,558	-		Echvi_3976	0.47	+0.5
4,764,583	+		Echvi_3976	0.55	+2.2
4,764,669	+		Echvi_3976	0.83	+0.8
4,764,670	-		Echvi_3976	0.83	+0.4
4,764,670	-		Echvi_3976	0.83	-0.5
4,764,670	-		Echvi_3976	0.83	-0.4
4,764,670	-		Echvi_3976	0.83	-2.0
4,764,670	-		Echvi_3976	0.83	-3.4
4,764,670	-		Echvi_3976	0.83	-0.6
4,764,672	-		Echvi_3976	0.84	+0.8
4,764,672	-		Echvi_3976	0.84	-0.8
4,764,672	-		Echvi_3976	0.84	-0.0
4,764,675	+		Echvi_3976	0.85	+1.1
4,764,675	+		Echvi_3976	0.85	-1.4
4,764,676	-		Echvi_3976	0.85	-0.9
4,764,713	-				-0.8
4,764,738	-		Echvi_3977	0.10	+0.6
4,764,749	+		Echvi_3977	0.16	-0.6
4,764,750	-		Echvi_3977	0.16	+1.6
4,764,755	+		Echvi_3977	0.19	-0.4
4,764,765	-		Echvi_3977	0.24	+1.1
4,764,774	+		Echvi_3977	0.28	+0.1
4,764,774	+		Echvi_3977	0.28	-0.6
4,764,797	-		Echvi_3977	0.39	-1.2
4,764,797	-		Echvi_3977	0.39	+0.2
4,764,840	-		Echvi_3977	0.60	-1.7
4,764,842	+		Echvi_3977	0.61	-1.5
4,764,843	-		Echvi_3977	0.62	+1.2
4,764,885	+		Echvi_3977	0.82	+0.4
4,764,893	-		Echvi_3977	0.86	-0.6
4,764,894	+		Echvi_3977	0.87	-1.2
4,764,895	-		Echvi_3977	0.87	-2.5
4,764,923	+				-0.7
4,764,929	+				+0.5
4,764,930	-				-0.4
4,764,930	-				-0.5
4,764,930	-				+1.5
4,765,002	+				+0.2
4,765,003	-				-0.4
4,765,015	+				-0.1
4,765,034	+				+0.7
4,765,045	+				+1.0
4,765,053	+				+1.0
4,765,053	+				+0.7
4,765,056	+				-0.7
4,765,061	+				-2.6
4,765,061	+				-1.5
4,765,116	+				-0.5
4,765,116	+				+0.8
4,765,116	+				+0.0
4,765,126	+				+1.4
4,765,133	+				+0.6
4,765,314	+				-0.5
4,765,322	-				-0.2
4,765,362	+		Echvi_3978	0.10	-0.4
4,765,362	+		Echvi_3978	0.10	+0.3
4,765,363	-		Echvi_3978	0.10	+2.6
4,765,364	+		Echvi_3978	0.10	+0.7
4,765,569	+		Echvi_3978	0.19	+1.4
4,765,570	-		Echvi_3978	0.19	-0.1
4,765,610	+		Echvi_3978	0.21	+1.0
4,765,610	+		Echvi_3978	0.21	-0.7
4,765,611	-		Echvi_3978	0.21	+0.5
4,765,636	+		Echvi_3978	0.22	+0.3
4,765,636	+		Echvi_3978	0.22	+1.6
4,765,637	-		Echvi_3978	0.22	-0.0
4,765,697	-		Echvi_3978	0.25	-0.9
4,765,785	-		Echvi_3978	0.29	-0.3
4,765,901	+		Echvi_3978	0.34	+0.3
4,765,901	+		Echvi_3978	0.34	-0.7
4,765,902	-		Echvi_3978	0.34	+1.0
4,765,902	-		Echvi_3978	0.34	-1.9
4,765,902	-		Echvi_3978	0.34	-1.2
4,765,905	+		Echvi_3978	0.34	-0.7
4,765,905	+		Echvi_3978	0.34	-0.4
4,765,905	+		Echvi_3978	0.34	-0.3
4,765,905	+		Echvi_3978	0.34	+0.7
4,765,906	-		Echvi_3978	0.34	-0.9
4,765,906	-		Echvi_3978	0.34	+0.0
4,765,906	-		Echvi_3978	0.34	-1.2
4,765,906	-		Echvi_3978	0.34	-1.3