Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3925

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,700,317	+				-1.1
4,700,319	+				+1.6
4,700,320	-				+0.1
4,700,320	-				-2.5
4,700,353	-				-3.2
4,700,353	-				-2.3
4,700,359	-				-3.5
4,700,359	-				-3.1
4,700,374	-				-2.3
4,700,490	+				-3.5
4,700,544	+				+0.7
4,700,569	+				+0.0
4,700,594	+				-0.1
4,700,616	+		Echvi_3924	0.12	-0.3
4,700,623	+		Echvi_3924	0.13	+1.3
4,700,623	+		Echvi_3924	0.13	-0.2
4,700,659	-		Echvi_3924	0.19	-0.9
4,700,795	+		Echvi_3924	0.43	+0.7
4,700,796	-		Echvi_3924	0.43	-3.2
4,700,861	-		Echvi_3924	0.55	-3.9
4,700,861	-		Echvi_3924	0.55	-1.0
4,700,864	+		Echvi_3924	0.55	+0.6
4,700,864	+		Echvi_3924	0.55	-2.7
4,700,865	-		Echvi_3924	0.55	-2.0
4,700,867	+		Echvi_3924	0.56	+0.2
4,700,887	-		Echvi_3924	0.59	-2.0
4,701,038	+		Echvi_3924	0.85	-0.4
4,701,038	+		Echvi_3924	0.85	-0.2
4,701,038	+		Echvi_3924	0.85	+1.2
4,701,038	+		Echvi_3924	0.85	+0.6
4,701,038	+		Echvi_3924	0.85	+0.8
4,701,038	+		Echvi_3924	0.85	-0.9
4,701,039	-		Echvi_3924	0.85	-2.6
4,701,039	-		Echvi_3924	0.85	-1.6
4,701,044	-		Echvi_3924	0.86	-0.0
4,701,044	-		Echvi_3924	0.86	-5.0
4,701,068	-				-2.9
4,701,092	+				+0.5
4,701,093	-				-0.2
4,701,093	-				-0.6
4,701,100	+				-1.0
4,701,155	+				+0.1
4,701,159	-				-1.6
4,701,159	-				-0.0
4,701,169	+				+0.2
4,701,176	-				-1.9
4,701,199	-				-3.2
4,701,201	+				-1.9
4,701,201	+				+1.0
4,701,202	-				-2.8
4,701,224	-				-0.8
4,701,244	+				+0.4
4,701,245	-				-3.7
4,701,271	+				-0.6
4,701,272	-				-1.4
4,701,274	+				-0.3
4,701,274	+				-0.7
4,701,275	-				-1.2
4,701,275	-				-0.2
4,701,275	-				-0.7
4,701,294	+				+1.1
4,701,326	+				+0.0
4,701,467	-		Echvi_3925	0.26	+1.1
4,701,496	+		Echvi_3925	0.31	-0.3
4,701,551	-		Echvi_3925	0.40	-0.9
4,701,551	-		Echvi_3925	0.40	-0.7
4,701,571	+		Echvi_3925	0.44	+0.3
4,701,571	+		Echvi_3925	0.44	-0.5
4,701,571	+		Echvi_3925	0.44	-0.4
4,701,572	-		Echvi_3925	0.44	-1.2
4,701,572	-		Echvi_3925	0.44	-0.8
4,701,572	-		Echvi_3925	0.44	-0.4
4,701,572	-		Echvi_3925	0.44	+0.4
4,701,572	-		Echvi_3925	0.44	-1.6
4,701,654	+		Echvi_3925	0.57	-1.1
4,701,655	-				+1.6
4,701,655	-		Echvi_3925	0.57	+0.4
4,701,655	-		Echvi_3925	0.57	-0.7
4,701,655	-		Echvi_3925	0.57	+1.0
4,701,655	-		Echvi_3925	0.57	-1.3
4,701,703	+		Echvi_3925	0.65	+0.6
4,701,706	+		Echvi_3925	0.66	-0.7
4,701,706	+		Echvi_3925	0.66	-2.4
4,701,706	+		Echvi_3925	0.66	-0.9
4,701,706	+		Echvi_3925	0.66	-1.4
4,701,707	-		Echvi_3925	0.66	+1.2
4,701,709	-		Echvi_3925	0.66	+0.2
4,701,736	+		Echvi_3925	0.71	-0.7
4,701,737	-		Echvi_3925	0.71	-0.9
4,701,737	-		Echvi_3925	0.71	+0.1
4,701,782	-		Echvi_3925	0.78	+0.4
4,701,796	+		Echvi_3925	0.81	-0.4
4,701,808	+		Echvi_3925	0.83	-2.7
4,701,811	+		Echvi_3925	0.83	+2.6
4,701,811	+		Echvi_3925	0.83	-0.2
4,701,910	+				+1.0
4,701,910	+				-0.1
4,701,978	+				+0.2
4,701,978	+				+0.6
4,701,978	+				+0.8
4,701,979	-				-0.4
4,701,979	-				+1.8
4,701,979	-				+1.2
4,701,979	-				-0.5
4,702,029	-				+0.3
4,702,045	+				-0.9
4,702,121	+		Echvi_3926	0.20	+0.8
4,702,122	-		Echvi_3926	0.20	+0.2
4,702,238	+		Echvi_3926	0.43	+1.0
4,702,251	+		Echvi_3926	0.46	-0.5
4,702,252	-		Echvi_3926	0.46	-0.7
4,702,254	+		Echvi_3926	0.46	+1.3
4,702,255	-		Echvi_3926	0.46	-0.3
4,702,272	-		Echvi_3926	0.50	+1.3
4,702,359	+		Echvi_3926	0.67	-0.8
4,702,433	+		Echvi_3926	0.81	+1.2
4,702,434	-		Echvi_3926	0.81	-0.3
4,702,663	+				+0.7
4,702,663	+				+1.6
4,702,689	+				-0.6
4,702,690	-				-0.3
4,702,792	-		Echvi_3927	0.15	+0.0
4,702,896	+		Echvi_3927	0.31	+1.0
4,702,896	+		Echvi_3927	0.31	+0.2
4,702,898	+		Echvi_3927	0.32	+0.5
4,702,899	-		Echvi_3927	0.32	-1.7
4,702,899	-		Echvi_3927	0.32	+0.2