Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3918

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,691,572	-		Echvi_3917	0.53	+1.5
4,691,586	+		Echvi_3917	0.54	+0.9
4,691,792	+		Echvi_3917	0.69	+0.4
4,691,793	-		Echvi_3917	0.69	-0.1
4,691,800	+		Echvi_3917	0.70	+0.6
4,691,800	+		Echvi_3917	0.70	+0.4
4,691,800	+		Echvi_3917	0.70	+2.4
4,691,801	-		Echvi_3917	0.70	-0.0
4,691,807	-		Echvi_3917	0.70	-0.4
4,691,836	+		Echvi_3917	0.72	+1.4
4,691,837	-		Echvi_3917	0.72	-1.5
4,691,896	+		Echvi_3917	0.77	+0.8
4,691,900	-		Echvi_3917	0.77	-0.6
4,691,906	+		Echvi_3917	0.77	+1.5
4,692,091	+				+2.2
4,692,092	-				+0.9
4,692,125	-				-1.2
4,692,146	-				-2.1
4,692,188	-				-0.3
4,692,203	-				-2.5
4,692,206	-				-0.2
4,692,216	-				-1.6
4,692,233	+				+1.6
4,692,233	+				-0.8
4,692,239	+				-0.7
4,692,362	-				-1.7
4,692,389	+				+1.6
4,692,389	+				+0.4
4,692,390	-				-1.3
4,692,390	-				-1.6
4,692,390	-				-1.6
4,692,390	-				-2.3
4,692,487	+				-0.2
4,692,488	-				+0.0
4,692,519	+				-1.2
4,692,520	-				-2.0
4,692,550	+				-2.1
4,692,551	-				-3.0
4,692,556	+				-1.9
4,692,557	-				-3.1
4,692,565	+				-2.7
4,692,566	-				-3.6
4,692,572	-				-3.0
4,692,600	+		Echvi_3918	0.16	-1.7
4,692,829	+				-0.4
4,692,830	-				-1.4
4,692,843	+				-1.2
4,692,843	+				-0.4
4,692,851	+				+0.6
4,692,851	+				+0.3
4,692,853	+				-1.2
4,692,853	+				-0.5
4,692,896	-				-1.5
4,692,956	+				-0.5
4,692,964	+				+0.9
4,693,007	-				-1.3
4,693,025	+		Echvi_3919	0.12	-0.9
4,693,025	+		Echvi_3919	0.12	-2.8
4,693,078	+		Echvi_3919	0.19	+0.3
4,693,096	+		Echvi_3919	0.22	+0.7
4,693,097	-		Echvi_3919	0.22	-3.0
4,693,097	-		Echvi_3919	0.22	-0.3
4,693,097	-		Echvi_3919	0.22	-0.7
4,693,097	-		Echvi_3919	0.22	+0.2
4,693,097	-		Echvi_3919	0.22	-3.0
4,693,106	+		Echvi_3919	0.23	-0.3
4,693,107	-		Echvi_3919	0.23	-1.5
4,693,118	+		Echvi_3919	0.25	+0.2
4,693,119	-		Echvi_3919	0.25	-1.0
4,693,119	-		Echvi_3919	0.25	-0.6
4,693,205	+		Echvi_3919	0.37	-2.5
4,693,206	-		Echvi_3919	0.37	-0.4
4,693,242	+		Echvi_3919	0.43	-0.4
4,693,242	+		Echvi_3919	0.43	+0.8
4,693,243	-		Echvi_3919	0.43	-1.2
4,693,287	+		Echvi_3919	0.49	+0.1
4,693,305	-		Echvi_3919	0.52	-1.2
4,693,381	-		Echvi_3919	0.63	-1.2
4,693,381	-		Echvi_3919	0.63	+0.6
4,693,427	-		Echvi_3919	0.69	-1.4
4,693,433	+		Echvi_3919	0.70	-1.5
4,693,434	-		Echvi_3919	0.70	-0.7
4,693,434	-		Echvi_3919	0.70	+3.2
4,693,434	-		Echvi_3919	0.70	+0.9
4,693,434	-		Echvi_3919	0.70	-1.5
4,693,456	-		Echvi_3919	0.73	+0.6
4,693,542	-		Echvi_3919	0.86	-0.0
4,693,599	+				-1.4
4,693,626	+				-0.8
4,693,642	+				+0.8
4,693,642	+				-0.3
4,693,642	+				-1.1
4,693,644	+				-0.6
4,693,644	+				-2.0
4,693,644	+				-0.4
4,693,646	+				-2.5
4,693,646	+				+0.1
4,693,647	-				-0.3
4,693,651	-				-0.1
4,693,703	+				-2.0
4,693,704	-				-1.4
4,693,706	+				+0.4
4,693,707	-				-2.2
4,693,711	+				+0.7
4,693,712	-				-0.7
4,693,712	-				-2.7