Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3892

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,650,187	-		Echvi_3891	0.66	+0.3
4,650,213	-		Echvi_3891	0.68	-1.0
4,650,245	+		Echvi_3891	0.70	-0.0
4,650,245	+		Echvi_3891	0.70	+0.2
4,650,245	+		Echvi_3891	0.70	+1.0
4,650,245	+		Echvi_3891	0.70	+0.8
4,650,245	+		Echvi_3891	0.70	-0.6
4,650,248	+		Echvi_3891	0.70	+1.1
4,650,248	+		Echvi_3891	0.70	-2.0
4,650,249	-		Echvi_3891	0.70	-0.2
4,650,251	+		Echvi_3891	0.71	-0.9
4,650,252	-		Echvi_3891	0.71	-0.3
4,650,267	+		Echvi_3891	0.72	-1.5
4,650,268	-		Echvi_3891	0.72	+0.4
4,650,285	-		Echvi_3891	0.73	-0.2
4,650,323	+		Echvi_3891	0.75	-1.6
4,650,353	+		Echvi_3891	0.77	+0.0
4,650,390	-		Echvi_3891	0.79	-1.7
4,650,398	+		Echvi_3891	0.80	-0.5
4,650,398	+		Echvi_3891	0.80	-0.7
4,650,398	+		Echvi_3891	0.80	-0.5
4,650,398	+		Echvi_3891	0.80	-1.8
4,650,398	+		Echvi_3891	0.80	-3.1
4,650,398	+		Echvi_3891	0.80	-2.5
4,650,399	-		Echvi_3891	0.80	+0.6
4,650,399	-		Echvi_3891	0.80	+1.0
4,650,399	-		Echvi_3891	0.80	-0.2
4,650,399	-		Echvi_3891	0.80	-1.4
4,650,399	-		Echvi_3891	0.80	+0.5
4,650,399	-		Echvi_3891	0.80	-0.0
4,650,399	-		Echvi_3891	0.80	-2.7
4,650,406	+		Echvi_3891	0.80	-1.6
4,650,464	+		Echvi_3891	0.84	+0.6
4,650,464	+		Echvi_3891	0.84	-0.5
4,650,464	+		Echvi_3891	0.84	-0.7
4,650,464	+		Echvi_3891	0.84	+1.5
4,650,464	+		Echvi_3891	0.84	-0.2
4,650,465	-		Echvi_3891	0.84	+0.1
4,650,465	-		Echvi_3891	0.84	-0.0
4,650,530	+		Echvi_3891	0.88	-0.5
4,650,530	+		Echvi_3891	0.88	-1.2
4,650,531	-		Echvi_3891	0.89	-1.1
4,650,533	+		Echvi_3891	0.89	+1.6
4,650,533	+		Echvi_3891	0.89	-1.3
4,650,533	+		Echvi_3891	0.89	-1.0
4,650,533	+		Echvi_3891	0.89	+0.7
4,650,534	-		Echvi_3891	0.89	-2.6
4,650,603	-				-1.2
4,650,603	-				+0.2
4,650,603	-				-1.8
4,650,603	-				-0.7
4,650,688	-				-0.2
4,650,759	+				-0.4
4,650,759	+				+2.0
4,650,760	-				-1.6
4,650,763	+				+0.5
4,650,763	+				-1.4
4,650,763	+				-0.4
4,650,763	+				-0.1
4,650,764	-				-0.9
4,650,764	-				-0.3
4,650,830	-				-0.6
4,650,908	+				-1.0
4,650,908	+				+0.8
4,650,908	+				-1.7
4,650,908	+				+0.5
4,650,909	-				-1.3
4,650,909	-				-1.0
4,650,909	-				-1.9
4,650,909	-				-0.9
4,650,909	-				-0.4
4,650,909	-				-1.3
4,650,909	-				-0.3
4,650,939	+				-1.8
4,651,032	-				+0.2
4,651,184	+				-0.4
4,651,184	+				-0.5
4,651,184	+				-0.5
4,651,184	+				-0.7
4,652,472	-				-0.7
4,652,511	+				-2.4
4,652,542	+				-2.5
4,652,630	+				-2.8
4,652,630	+				+1.6
4,652,631	-				+1.8
4,652,631	-				-0.9
4,652,805	-		Echvi_3893	0.13	+1.9
4,652,844	-		Echvi_3893	0.15	+1.0
4,652,872	-		Echvi_3893	0.16	+2.9
4,652,878	-		Echvi_3893	0.16	+1.6
4,652,882	-		Echvi_3893	0.16	+0.8
4,652,882	-		Echvi_3893	0.16	-0.9
4,652,949	-		Echvi_3893	0.19	+2.3
4,652,949	-		Echvi_3893	0.19	+1.6
4,653,316	-		Echvi_3893	0.35	+0.9