Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3881

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,636,453	-				-0.4
4,636,464	+				+0.3
4,636,542	-				-1.7
4,636,542	-				-0.3
4,636,550	+				+0.0
4,636,551	-				+1.4
4,636,551	-				+0.0
4,636,695	-				-2.9
4,636,699	-				-0.7
4,636,717	+				-1.1
4,636,765	+		Echvi_3880	0.18	+0.5
4,636,937	+		Echvi_3880	0.82	+1.1
4,636,952	+		Echvi_3880	0.87	-2.4
4,636,952	+		Echvi_3880	0.87	+0.6
4,636,952	+		Echvi_3880	0.87	-0.2
4,636,953	-		Echvi_3880	0.88	-2.0
4,636,953	-		Echvi_3880	0.88	-1.5
4,636,953	-		Echvi_3880	0.88	+0.0
4,636,953	-		Echvi_3880	0.88	+0.8
4,636,958	+		Echvi_3880	0.90	+1.4
4,636,965	-				-2.6
4,636,980	+				+1.0
4,636,981	-				-0.6
4,636,987	-				-2.5
4,636,992	+				+0.6
4,636,993	-				-1.5
4,637,013	-				+1.3
4,637,013	-				+1.1
4,637,022	-				+0.8
4,637,060	+				-0.7
4,637,060	+				-0.1
4,637,129	-				+0.0
4,637,212	-				-0.9
4,637,312	+				+1.2
4,637,337	+				-1.4
4,637,338	-				-0.3
4,637,389	-				+0.0
4,637,408	+				-0.2
4,637,487	-				+1.3
4,637,587	-		Echvi_3881	0.18	+0.3
4,637,678	+		Echvi_3881	0.28	+0.1
4,637,683	-		Echvi_3881	0.29	-1.8
4,637,683	-		Echvi_3881	0.29	-1.9
4,637,803	+		Echvi_3881	0.42	-1.0
4,637,803	+		Echvi_3881	0.42	+0.2
4,637,804	-		Echvi_3881	0.42	-0.6
4,637,804	-		Echvi_3881	0.42	+0.5
4,637,804	-		Echvi_3881	0.42	-1.3
4,637,804	-		Echvi_3881	0.42	-0.9
4,637,804	-		Echvi_3881	0.42	-1.0
4,637,805	+		Echvi_3881	0.43	-0.3
4,637,825	+		Echvi_3881	0.45	+0.5
4,637,845	-		Echvi_3881	0.47	-2.1
4,637,883	+		Echvi_3881	0.51	-0.3
4,637,929	+		Echvi_3881	0.56	+0.5
4,637,930	-		Echvi_3881	0.57	-2.1
4,637,983	+		Echvi_3881	0.62	-0.4
4,637,983	+		Echvi_3881	0.62	+1.4
4,637,984	-		Echvi_3881	0.63	-1.0
4,637,986	-		Echvi_3881	0.63	-0.9
4,637,986	-		Echvi_3881	0.63	+0.6
4,638,034	-		Echvi_3881	0.68	-1.6
4,638,169	-		Echvi_3881	0.83	-1.2
4,638,209	-		Echvi_3881	0.88	-2.0
4,638,229	+		Echvi_3881	0.90	+1.3
4,638,259	+				-0.3
4,638,260	-				+1.0
4,638,260	-				-1.2
4,638,260	-				-2.0
4,638,303	-				-3.8
4,638,312	+				-1.6
4,638,312	+				+0.4
4,638,313	-				-0.7
4,638,313	-				+1.3
4,638,319	+				+0.2
4,638,319	+				-1.6
4,638,333	-				-0.7
4,638,364	+				+0.2
4,638,365	-				-0.4
4,638,367	-				-1.4
4,638,375	+				+0.6
4,638,375	+				+1.2
4,638,376	-				-0.3
4,638,419	+				+0.2
4,638,481	+		Echvi_3882	0.15	+1.8
4,638,481	+		Echvi_3882	0.15	-0.7
4,638,481	+		Echvi_3882	0.15	-0.6
4,638,481	+		Echvi_3882	0.15	+0.6
4,638,481	+		Echvi_3882	0.15	-1.7
4,638,482	-		Echvi_3882	0.15	-3.5
4,638,482	-		Echvi_3882	0.15	-0.4
4,638,485	+		Echvi_3882	0.15	-1.0
4,638,485	+		Echvi_3882	0.15	-0.8
4,638,485	+		Echvi_3882	0.15	-0.5
4,638,485	+		Echvi_3882	0.15	-1.4
4,638,486	-		Echvi_3882	0.15	-3.3
4,638,486	-		Echvi_3882	0.15	-0.4
4,638,486	-		Echvi_3882	0.15	-1.6
4,638,486	-		Echvi_3882	0.15	-0.8
4,638,512	+		Echvi_3882	0.18	+0.1
4,638,513	-		Echvi_3882	0.18	-2.2
4,638,826	-		Echvi_3882	0.50	-1.9
4,638,852	-		Echvi_3882	0.52	-2.0
4,638,984	-		Echvi_3882	0.66	-1.6
4,638,984	-		Echvi_3882	0.66	-1.2
4,639,036	+		Echvi_3882	0.71	+0.6
4,639,039	-		Echvi_3882	0.71	-2.3
4,639,039	-		Echvi_3882	0.71	+0.3
4,639,039	-		Echvi_3882	0.71	-1.1
4,639,061	+		Echvi_3882	0.74	+0.1
4,639,062	-		Echvi_3882	0.74	+0.1
4,639,062	-		Echvi_3882	0.74	+0.6
4,639,152	+		Echvi_3882	0.83	+0.9
4,639,152	+		Echvi_3882	0.83	+0.9
4,639,153	-		Echvi_3882	0.83	-3.7
4,639,179	-		Echvi_3882	0.86	-0.5
4,639,253	+				-1.8
4,639,253	+				+0.4
4,639,253	+				+0.1
4,639,254	-				-2.2
4,639,298	-				-0.5
4,639,304	+				-0.7