Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3859

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,611,110	+				+0.3
4,611,111	-				+2.5
4,611,194	-				+1.1
4,611,237	+				+0.6
4,611,239	+				+0.6
4,611,240	-				+1.2
4,611,240	-				+0.6
4,611,240	-				+0.5
4,611,242	+				+0.3
4,611,263	+				+1.1
4,611,263	+				-1.0
4,611,263	+				-1.4
4,611,308	+				-0.2
4,611,308	+				-0.2
4,611,308	+				-0.4
4,611,308	+				-1.9
4,611,309	-				+0.8
4,611,377	-		Echvi_3858	0.12	-0.7
4,611,472	+		Echvi_3858	0.26	+0.3
4,611,472	+		Echvi_3858	0.26	-1.7
4,611,492	+		Echvi_3858	0.28	-0.0
4,611,492	+		Echvi_3858	0.28	+0.8
4,611,611	+		Echvi_3858	0.45	+0.4
4,611,612	-		Echvi_3858	0.45	+0.1
4,611,715	-		Echvi_3858	0.60	+0.5
4,611,730	+		Echvi_3858	0.62	-0.2
4,611,758	+		Echvi_3858	0.66	-0.0
4,611,864	-		Echvi_3858	0.81	-1.8
4,611,864	-		Echvi_3858	0.81	-0.1
4,611,876	-		Echvi_3858	0.82	+0.4
4,612,022	+				-0.3
4,612,022	+				-0.2
4,612,022	+				-0.3
4,612,022	+				-0.7
4,612,023	-				+1.1
4,612,023	-				+0.7
4,612,023	-				-0.2
4,612,032	+				+0.9
4,612,033	-				+0.7
4,612,078	+				+1.2
4,612,207	+		Echvi_3859	0.21	-1.2
4,612,207	+		Echvi_3859	0.21	+0.2
4,612,207	+		Echvi_3859	0.21	+0.9
4,612,208	-		Echvi_3859	0.22	+1.6
4,612,208	-		Echvi_3859	0.22	+0.3
4,612,211	+		Echvi_3859	0.22	+1.0
4,612,325	-		Echvi_3859	0.35	+2.0
4,612,342	-		Echvi_3859	0.37	+1.4
4,612,475	+		Echvi_3859	0.53	+0.3
4,612,612	+		Echvi_3859	0.69	+0.7
4,612,633	-		Echvi_3859	0.71	+0.4
4,612,672	-		Echvi_3859	0.76	-2.0
4,612,747	-		Echvi_3859	0.84	+1.3
4,612,770	+		Echvi_3859	0.87	+1.1
4,612,885	-				+1.0
4,613,028	-		Echvi_3860	0.14	+0.2
4,613,028	-		Echvi_3860	0.14	+0.6
4,613,072	+		Echvi_3860	0.20	-1.6
4,613,076	-		Echvi_3860	0.20	+0.6
4,613,239	+		Echvi_3860	0.43	+0.7
4,613,306	+		Echvi_3860	0.52	+1.8
4,613,374	-		Echvi_3860	0.62	-0.1
4,613,600	-				+0.2
4,613,650	+				+0.4
4,613,650	+				+0.8
4,613,650	+				-1.3
4,613,650	+				+0.1
4,613,650	+				+0.0
4,613,650	+				-1.7
4,613,651	-				+2.4