Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3855

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,605,435	+		Echvi_3854	0.17	-1.4
4,605,436	-		Echvi_3854	0.17	-0.0
4,605,439	+		Echvi_3854	0.18	+2.6
4,605,439	+		Echvi_3854	0.18	-0.5
4,605,439	+		Echvi_3854	0.18	+0.6
4,605,444	-		Echvi_3854	0.18	+0.6
4,605,461	+		Echvi_3854	0.20	+2.4
4,605,474	+		Echvi_3854	0.21	-0.2
4,605,474	+		Echvi_3854	0.21	+0.6
4,605,475	-		Echvi_3854	0.21	-0.9
4,605,476	+		Echvi_3854	0.21	+0.4
4,605,476	+		Echvi_3854	0.21	-0.5
4,605,476	+		Echvi_3854	0.21	+1.6
4,605,476	-		Echvi_3854	0.21	-1.2
4,605,503	-		Echvi_3854	0.23	-0.4
4,605,532	-		Echvi_3854	0.26	+0.6
4,605,565	-		Echvi_3854	0.29	-0.2
4,605,578	+		Echvi_3854	0.30	+0.7
4,605,578	+		Echvi_3854	0.30	-1.7
4,605,578	+		Echvi_3854	0.30	+1.8
4,605,579	-		Echvi_3854	0.30	-0.6
4,605,579	-		Echvi_3854	0.30	+0.1
4,605,579	-		Echvi_3854	0.30	-0.7
4,605,585	-		Echvi_3854	0.31	-0.9
4,605,598	-		Echvi_3854	0.32	-2.1
4,605,611	+		Echvi_3854	0.33	+0.2
4,605,611	+		Echvi_3854	0.33	-1.3
4,605,611	+		Echvi_3854	0.33	+0.7
4,605,611	+		Echvi_3854	0.33	+0.9
4,605,611	+		Echvi_3854	0.33	-0.1
4,605,612	-		Echvi_3854	0.33	+0.5
4,605,612	-		Echvi_3854	0.33	+0.1
4,605,797	-		Echvi_3854	0.50	-0.1
4,605,992	-		Echvi_3854	0.67	+0.4
4,605,994	-		Echvi_3854	0.67	+3.2
4,605,994	-		Echvi_3854	0.67	+3.6
4,606,010	+		Echvi_3854	0.69	+0.0
4,606,010	+		Echvi_3854	0.69	+0.8
4,606,043	-		Echvi_3854	0.71	+0.1
4,606,043	-		Echvi_3854	0.71	+1.8
4,606,043	-		Echvi_3854	0.71	-2.3
4,606,086	+		Echvi_3854	0.75	+0.3
4,606,090	+		Echvi_3854	0.76	-0.1
4,606,091	-		Echvi_3854	0.76	-0.2
4,606,091	-		Echvi_3854	0.76	-0.9
4,606,167	+		Echvi_3854	0.83	+1.6
4,606,168	-		Echvi_3854	0.83	-0.6
4,606,173	-		Echvi_3854	0.83	+2.2
4,606,286	+				+1.2
4,606,383	+				-0.1
4,606,402	+				+0.4
4,606,417	+				-2.7
4,606,438	-				+0.3
4,606,496	-				-0.0
4,606,586	+		Echvi_3855	0.19	+0.0
4,606,607	+		Echvi_3855	0.21	-1.9
4,606,645	-		Echvi_3855	0.26	-1.0
4,606,646	+		Echvi_3855	0.26	+0.3
4,606,647	-		Echvi_3855	0.26	-2.3
4,606,647	-		Echvi_3855	0.26	-1.2
4,606,647	-		Echvi_3855	0.26	-0.3
4,606,868	-		Echvi_3855	0.52	-1.4
4,606,868	-		Echvi_3855	0.52	-0.5
4,606,902	-		Echvi_3855	0.56	-0.1
4,606,902	-		Echvi_3855	0.56	-1.9
4,606,902	-		Echvi_3855	0.56	-1.1
4,606,902	-		Echvi_3855	0.56	-0.6
4,607,136	-		Echvi_3855	0.84	-0.8
4,607,142	+		Echvi_3855	0.84	-0.3
4,607,195	+				+0.2
4,607,196	-				+0.6
4,607,197	+				+0.7
4,607,197	+				-0.4
4,607,198	-				+0.4
4,607,223	-				-1.1
4,607,280	-				+0.3
4,607,280	-				+0.3
4,607,280	-				-1.1
4,607,285	-				-0.4
4,607,287	+				+0.3
4,607,288	-				-0.5
4,607,288	-				-0.2
4,607,288	-				+0.6
4,607,309	-				+0.5
4,607,310	+				-0.0
4,607,319	+				-0.1
4,607,325	+				+0.4
4,607,349	+				+0.2
4,607,362	+				-0.0
4,607,363	-				+1.3
4,607,386	+				+0.4
4,607,394	+				-0.7
4,607,410	-				-0.6
4,607,483	+				+0.5
4,607,484	-				-0.6
4,607,484	-				-1.3
4,607,484	-				+0.8
4,607,490	+				-1.3
4,607,490	+				-0.6
4,607,491	-				-2.1
4,607,505	-				-0.1
4,607,515	-				+1.8
4,607,515	-				+0.6
4,607,529	-				+0.3
4,607,578	+				+0.6
4,607,592	+				-0.2
4,607,592	+				-0.3
4,607,593	-				-1.2
4,607,595	-				-1.1
4,607,621	+				+1.9
4,607,621	+				+1.4
4,607,622	-				+1.0
4,607,622	-				-0.5
4,607,622	-				+0.7
4,607,622	-				+0.4
4,607,655	-				+1.3
4,607,691	-				-0.0
4,607,711	+				+0.0
4,607,799	-				+1.0
4,607,870	-				-1.0
4,607,876	-				-0.1
4,607,876	-				-2.0
4,607,895	-				+0.5
4,608,195	+		Echvi_3856	0.17	-1.2
4,608,195	+		Echvi_3856	0.17	+0.5
4,608,197	+		Echvi_3856	0.19	-1.4
4,608,197	+		Echvi_3856	0.19	-1.6
4,608,197	+		Echvi_3856	0.19	+1.9
4,608,197	+		Echvi_3856	0.19	-0.3
4,608,248	-		Echvi_3856	0.54	-1.3
4,608,248	-		Echvi_3856	0.54	+0.9
4,608,257	-		Echvi_3856	0.60	-0.4
4,608,270	-		Echvi_3856	0.69	+1.6
4,608,270	-		Echvi_3856	0.69	+1.0
4,608,270	-		Echvi_3856	0.69	-0.3
4,608,270	-		Echvi_3856	0.69	+0.2
4,608,271	+		Echvi_3856	0.70	-0.3
4,608,271	+		Echvi_3856	0.70	-0.0
4,608,271	+		Echvi_3856	0.70	+0.3
4,608,271	+		Echvi_3856	0.70	-1.0
4,608,272	-		Echvi_3856	0.71	-0.0
4,608,272	-		Echvi_3856	0.71	-0.9
4,608,272	-		Echvi_3856	0.71	-0.1