Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3645

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,330,190	+				-2.6
4,330,191	-				-0.1
4,330,191	-				+2.0
4,330,204	+				-0.2
4,330,204	+				-1.7
4,330,204	+				+0.3
4,330,205	-				+0.0
4,330,210	-				+1.5
4,330,243	+				-0.4
4,330,288	-				-0.5
4,330,321	+				+1.1
4,330,355	-				-0.2
4,330,395	+				-0.6
4,330,462	+				-0.4
4,330,469	+				-1.5
4,330,477	-				-0.8
4,330,494	-				-1.4
4,330,494	-				-0.0
4,330,512	-				-0.4
4,330,512	-				-2.5
4,330,526	+				-0.1
4,330,526	+				-0.9
4,330,526	+				-3.1
4,330,526	+				+0.1
4,330,526	+				-0.1
4,330,526	+				+0.8
4,330,527	-				+0.6
4,330,527	-				+0.4
4,330,528	+				-1.3
4,330,528	+				-1.0
4,330,528	+				-1.1
4,330,528	+				-0.4
4,330,529	-				-0.4
4,330,529	-				-1.0
4,330,536	-				-1.2
4,330,536	-				-0.4
4,330,600	-				-0.1
4,330,636	-				-0.1
4,330,636	-				+0.9
4,330,636	-				-0.0
4,330,668	+				-1.2
4,330,668	+				-3.0
4,330,668	+				-0.8
4,330,668	+				-1.1
4,330,669	-				-1.4
4,330,678	+				+0.8
4,330,726	+				-1.7
4,330,743	-				-0.6
4,330,743	-				+0.9
4,330,743	-				+0.8
4,330,743	-				-0.3
4,330,818	+				-2.2
4,330,837	-				-0.7
4,330,848	+				-0.6
4,330,854	+				-1.6
4,331,101	-				-1.3
4,331,101	-				-1.5
4,331,102	+				+1.1
4,331,120	-				-0.4
4,331,120	-				+1.9
4,331,121	+				-0.2
4,331,130	-				-2.3
4,331,185	-				-1.5
4,331,219	+				+0.6
4,331,228	-				+0.6
4,331,232	+				-0.7
4,331,233	-				+2.0
4,331,237	-				+0.8
4,331,237	-				+0.2
4,331,237	-				-2.0
4,331,241	+				+0.2
4,331,241	+				-1.1
4,331,260	-				+0.8
4,331,263	-				+1.6
4,331,263	-				-0.5
4,331,263	-				-2.8
4,331,278	+				-0.7
4,331,279	-				+3.1
4,331,360	+		Echvi_3645	0.10	+0.5
4,331,393	-		Echvi_3645	0.12	+0.2
4,331,397	-		Echvi_3645	0.13	-1.0
4,331,418	-		Echvi_3645	0.14	-0.7
4,331,423	+		Echvi_3645	0.14	+0.4
4,331,423	+		Echvi_3645	0.14	+0.6
4,331,525	+		Echvi_3645	0.20	+0.0
4,331,525	+		Echvi_3645	0.20	-1.9
4,331,525	+		Echvi_3645	0.20	+1.3
4,331,525	+		Echvi_3645	0.20	-0.7
4,331,526	-		Echvi_3645	0.20	-0.9
4,331,542	+		Echvi_3645	0.21	-0.7
4,331,542	+		Echvi_3645	0.21	-2.2
4,331,543	-		Echvi_3645	0.21	+0.4
4,331,543	-		Echvi_3645	0.21	+0.3
4,331,557	+		Echvi_3645	0.22	-0.6
4,331,557	+		Echvi_3645	0.22	+0.6
4,331,558	-		Echvi_3645	0.22	-0.2
4,331,558	-		Echvi_3645	0.22	-1.6
4,331,602	+		Echvi_3645	0.24	-1.2
4,331,602	+		Echvi_3645	0.24	-0.1
4,331,602	+		Echvi_3645	0.24	+1.0
4,331,602	+		Echvi_3645	0.24	-1.8
4,331,603	-		Echvi_3645	0.25	+0.3
4,331,603	-		Echvi_3645	0.25	-0.5
4,331,603	-		Echvi_3645	0.25	-1.1
4,331,603	-		Echvi_3645	0.25	+1.0
4,331,675	-		Echvi_3645	0.29	-0.0
4,331,675	-		Echvi_3645	0.29	-0.5
4,331,675	-		Echvi_3645	0.29	-2.1
4,331,675	-		Echvi_3645	0.29	-0.9
4,331,705	+		Echvi_3645	0.30	-0.5
4,331,740	-		Echvi_3645	0.32	-0.2
4,331,745	-		Echvi_3645	0.33	-0.2
4,331,745	-		Echvi_3645	0.33	-0.4
4,331,772	-		Echvi_3645	0.34	+1.9
4,331,794	-		Echvi_3645	0.36	+0.7
4,331,803	+		Echvi_3645	0.36	-3.1
4,331,807	+		Echvi_3645	0.36	-2.9
4,331,808	-		Echvi_3645	0.36	+0.3
4,331,881	+		Echvi_3645	0.41	-1.2
4,331,881	+		Echvi_3645	0.41	-2.4
4,331,881	+		Echvi_3645	0.41	+0.6
4,331,912	+		Echvi_3645	0.42	-0.1
4,331,912	+		Echvi_3645	0.42	-0.8
4,331,932	+		Echvi_3645	0.44	-2.0
4,331,932	+		Echvi_3645	0.44	-0.3
4,331,933	-		Echvi_3645	0.44	-1.1
4,331,944	+		Echvi_3645	0.44	-0.9
4,331,945	-		Echvi_3645	0.44	-0.1
4,332,009	+		Echvi_3645	0.48	-2.1
4,332,028	+		Echvi_3645	0.49	+0.0
4,332,029	-		Echvi_3645	0.49	-2.0
4,332,029	-		Echvi_3645	0.49	+0.4
4,332,071	-		Echvi_3645	0.52	+0.6
4,332,102	+		Echvi_3645	0.53	-0.7
4,332,103	-		Echvi_3645	0.53	+0.1
4,332,103	-		Echvi_3645	0.53	-0.1
4,332,103	-		Echvi_3645	0.53	+0.8
4,332,115	-		Echvi_3645	0.54	+1.3
4,332,115	-		Echvi_3645	0.54	-0.6
4,332,143	+		Echvi_3645	0.56	-1.1
4,332,153	-		Echvi_3645	0.56	-1.3
4,332,156	+		Echvi_3645	0.57	-0.3
4,332,157	-		Echvi_3645	0.57	-0.3
4,332,170	-		Echvi_3645	0.57	-0.3
4,332,170	-		Echvi_3645	0.57	-0.2
4,332,171	+		Echvi_3645	0.57	-0.3
4,332,171	+		Echvi_3645	0.57	-0.7
4,332,172	-		Echvi_3645	0.57	-1.7
4,332,172	-		Echvi_3645	0.57	-0.9
4,332,172	-		Echvi_3645	0.57	-0.8
4,332,172	-		Echvi_3645	0.57	-1.9
4,332,172	-		Echvi_3645	0.57	-0.5
4,332,183	+		Echvi_3645	0.58	+0.6
4,332,183	+		Echvi_3645	0.58	-1.9
4,332,189	-		Echvi_3645	0.58	+0.4
4,332,236	+		Echvi_3645	0.61	+1.0
4,332,243	+		Echvi_3645	0.62	-1.9
4,332,381	+		Echvi_3645	0.70	+0.1
4,332,382	-		Echvi_3645	0.70	-0.4
4,332,418	+		Echvi_3645	0.72	+0.1
4,332,447	+		Echvi_3645	0.73	+0.3
4,332,448	-		Echvi_3645	0.73	-0.4
4,332,451	+		Echvi_3645	0.74	+0.3
4,332,452	-		Echvi_3645	0.74	-1.6
4,332,466	-		Echvi_3645	0.74	-0.5
4,332,466	-		Echvi_3645	0.74	+0.5
4,332,550	-		Echvi_3645	0.79	+1.9
4,332,604	+		Echvi_3645	0.82	+0.1
4,332,605	-		Echvi_3645	0.83	-0.7
4,332,605	-		Echvi_3645	0.83	-0.2
4,332,676	+		Echvi_3645	0.87	-2.7
4,332,695	-		Echvi_3645	0.88	-1.4
4,332,741	+				-0.5
4,332,761	+				-1.4
4,332,762	-				-0.5
4,332,786	+				-2.6
4,332,874	+				-0.7
4,332,902	+				-0.8
4,332,904	+				-1.0
4,332,904	+				+0.9
4,332,905	-				+0.2
4,332,905	-				+0.5
4,332,905	-				-1.6
4,332,909	-		Echvi_3646	0.46	-0.1
4,332,913	+		Echvi_3646	0.47	+0.3
4,332,914	-		Echvi_3646	0.47	+0.6
4,332,917	-		Echvi_3646	0.48	-0.6
4,332,926	+		Echvi_3646	0.50	+1.0
4,332,929	+		Echvi_3646	0.51	+0.0
4,332,929	+		Echvi_3646	0.51	-0.2
4,332,930	-		Echvi_3646	0.51	+0.6
4,332,930	-		Echvi_3646	0.51	+1.2
4,332,932	+		Echvi_3646	0.52	+1.9
4,332,932	+		Echvi_3646	0.52	-0.3
4,332,932	+		Echvi_3646	0.52	-0.1
4,332,933	-		Echvi_3646	0.52	-1.4
4,332,933	-		Echvi_3646	0.52	-0.4
4,332,933	-		Echvi_3646	0.52	+0.3
4,332,935	+		Echvi_3646	0.53	-1.9
4,332,935	+		Echvi_3646	0.53	+0.7
4,332,935	+		Echvi_3646	0.53	+0.1
4,332,935	+		Echvi_3646	0.53	+0.0
4,332,935	+		Echvi_3646	0.53	+0.4
4,332,935	+		Echvi_3646	0.53	+0.7
4,332,936	-		Echvi_3646	0.53	-0.6
4,332,936	-		Echvi_3646	0.53	+0.5
4,332,936	-		Echvi_3646	0.53	+1.6
4,332,936	-		Echvi_3646	0.53	-1.0
4,332,936	-		Echvi_3646	0.53	-0.6
4,332,992	-		Echvi_3646	0.68	-0.6
4,333,093	+				+1.3
4,333,155	+				-1.0
4,333,155	+				-0.8
4,333,168	+				+0.0
4,333,224	+				+1.2
4,333,225	-				-1.1
4,333,225	-				+0.5
4,333,235	+				-1.6
4,333,244	+				-0.4
4,333,278	+				-1.4
4,333,278	+				-0.6
4,333,278	+				-0.2
4,333,279	-				+0.5
4,333,344	-		Echvi_3647	0.13	-1.1
4,333,344	-		Echvi_3647	0.13	-0.3
4,333,344	-		Echvi_3647	0.13	+1.2
4,333,376	+		Echvi_3647	0.18	-0.5
4,333,377	-		Echvi_3647	0.18	+0.9
4,333,403	-		Echvi_3647	0.22	-1.3
4,333,403	-		Echvi_3647	0.22	+2.0
4,333,433	-		Echvi_3647	0.27	-0.1
4,333,461	+		Echvi_3647	0.32	+0.6
4,333,488	+		Echvi_3647	0.36	-0.6
4,333,488	+		Echvi_3647	0.36	+0.8
4,333,489	-		Echvi_3647	0.36	+0.6
4,333,489	-		Echvi_3647	0.36	-1.2
4,333,502	-		Echvi_3647	0.38	-0.7
4,333,516	+		Echvi_3647	0.40	+0.2
4,333,517	-		Echvi_3647	0.40	+0.2
4,333,551	-		Echvi_3647	0.46	+0.5
4,333,551	-		Echvi_3647	0.46	-0.1
4,333,703	+		Echvi_3647	0.70	-0.8
4,333,703	+		Echvi_3647	0.70	+0.2
4,333,703	+		Echvi_3647	0.70	-0.1
4,333,706	+		Echvi_3647	0.70	+1.0
4,333,733	+		Echvi_3647	0.75	+0.4
4,333,733	+		Echvi_3647	0.75	+0.0
4,333,733	+		Echvi_3647	0.75	-0.2
4,333,734	-		Echvi_3647	0.75	-0.4
4,333,734	-		Echvi_3647	0.75	-0.9
4,333,746	-		Echvi_3647	0.77	+0.0
4,333,775	+		Echvi_3647	0.81	+0.7
4,333,777	+		Echvi_3647	0.82	-0.8
4,333,807	+		Echvi_3647	0.87	-1.2
4,333,808	-		Echvi_3647	0.87	-1.5
4,333,810	+		Echvi_3647	0.87	-3.0
4,333,810	+		Echvi_3647	0.87	-0.7
4,333,810	+		Echvi_3647	0.87	+1.0
4,333,811	-		Echvi_3647	0.87	-0.8
4,333,813	+		Echvi_3647	0.87	+0.1
4,333,825	-		Echvi_3647	0.89	+1.6
4,333,840	+				-0.4
4,333,841	-				-1.3
4,333,877	+				-2.5
4,333,877	+				+0.2
4,333,877	+				-1.6
4,333,877	+				+0.1
4,333,878	-				+0.1
4,333,878	-				-0.6
4,333,878	-				-1.2
4,333,878	-				-0.1
4,333,878	-				-0.3
4,333,878	-				-0.9
4,333,878	-				-0.0
4,333,879	+				+0.7
4,333,880	-				+0.2
4,333,883	+				+0.0