Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3313

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,913,811	+		Echvi_3311	0.82	+0.0
3,913,896	-				+0.0
3,913,896	-				+0.7
3,913,985	-				-1.7
3,913,985	-				-0.7
3,913,985	-				-1.6
3,913,985	-				-0.0
3,914,015	+				-1.3
3,914,034	+				+0.1
3,914,034	+				+1.6
3,914,034	+				-0.3
3,914,035	-				+0.4
3,914,035	-				-0.8
3,914,036	+				+1.0
3,914,037	-				-0.2
3,914,080	+				+0.4
3,914,081	-				-0.6
3,914,081	-				+0.0
3,914,081	-				-1.1
3,914,088	-				+0.5
3,914,187	+		Echvi_3312	0.32	+0.4
3,914,252	+		Echvi_3312	0.48	+0.6
3,914,402	-				+1.0
3,914,492	-				-0.0
3,914,497	-				-1.6
3,914,626	-				+0.6
3,914,682	-				+1.1
3,914,682	-				+0.7
3,914,682	-				-0.1
3,914,682	-				-1.2
3,914,682	-				+0.6
3,914,745	-				+1.0
3,914,764	+				+3.3
3,914,765	-				+1.0
3,914,773	-				+0.6
3,914,780	-				+0.6
3,914,781	+				+4.1
3,914,785	-				+0.8
3,914,803	+				+1.6
3,914,803	+				+0.7
3,914,803	+				+2.2
3,914,803	+				+1.7
3,914,803	+				+0.3
3,914,803	+				+0.6
3,914,803	+				+2.6
3,914,803	+				+2.2
3,914,804	-				+0.0
3,914,804	-				-1.2
3,914,804	-				+0.6
3,914,805	+				+2.2
3,914,805	+				+4.0
3,914,805	+				+3.1
3,914,806	-				+1.6
3,914,814	+				+1.5
3,914,815	-				+1.1
3,914,872	+		Echvi_3313	0.13	+2.8
3,914,952	+		Echvi_3313	0.29	+2.3
3,915,042	+		Echvi_3313	0.48	+3.2
3,915,049	-		Echvi_3313	0.49	+0.9
3,915,049	-		Echvi_3313	0.49	-0.6
3,915,209	+		Echvi_3313	0.81	+2.5
3,915,209	+		Echvi_3313	0.81	+2.9
3,915,211	+		Echvi_3313	0.82	+2.7
3,915,318	+				+3.2