Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3310

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,911,520	+		Echvi_3308	0.48	+1.2
3,911,521	-		Echvi_3308	0.48	-0.1
3,911,532	-		Echvi_3308	0.49	+0.0
3,911,621	+		Echvi_3308	0.60	+0.0
3,911,632	-		Echvi_3308	0.61	-1.2
3,911,647	-		Echvi_3308	0.63	-0.9
3,911,664	-		Echvi_3308	0.65	+0.5
3,911,670	-		Echvi_3308	0.66	+0.6
3,911,690	-		Echvi_3308	0.68	+0.6
3,911,697	+		Echvi_3308	0.69	+0.0
3,911,698	-		Echvi_3308	0.69	+1.9
3,911,698	-		Echvi_3308	0.69	-0.5
3,911,699	+		Echvi_3308	0.69	-0.8
3,911,829	-		Echvi_3308	0.85	-1.9
3,911,829	-		Echvi_3308	0.85	-1.2
3,911,883	-				-1.0
3,911,883	-				+0.0
3,911,947	+				+0.8
3,912,037	-		Echvi_3309	0.23	-0.4
3,912,143	+		Echvi_3309	0.53	-0.4
3,912,143	+		Echvi_3309	0.53	-0.7
3,912,182	-		Echvi_3309	0.63	+0.2
3,912,182	-		Echvi_3309	0.63	-0.2
3,912,184	+		Echvi_3309	0.64	-0.3
3,912,184	+		Echvi_3309	0.64	+0.4
3,912,185	-		Echvi_3309	0.64	-1.4
3,912,279	+				-0.1
3,912,280	-				-1.6
3,912,282	+				-0.3
3,912,283	-				-0.2
3,912,283	-				-2.3
3,912,283	-				+0.8
3,912,422	+				-2.3
3,912,422	+				-1.7
3,912,469	+				+1.0
3,912,469	+				-1.0
3,912,469	+				+0.4
3,912,470	-				+0.5
3,912,470	-				-0.6
3,912,519	+				+0.2
3,912,559	+				-0.6
3,912,560	-				+1.0
3,912,560	-				+1.6
3,912,560	-				+0.4
3,912,561	+				+0.7
3,912,561	+				-0.1
3,912,702	+		Echvi_3310	0.37	-1.2
3,912,716	+		Echvi_3310	0.40	-2.3
3,912,716	+		Echvi_3310	0.40	-0.3
3,912,717	-		Echvi_3310	0.40	+0.2
3,912,717	-		Echvi_3310	0.40	-0.6
3,912,775	+		Echvi_3310	0.52	+2.7
3,912,813	+		Echvi_3310	0.60	+0.3
3,912,867	+		Echvi_3310	0.71	-0.2
3,912,906	+		Echvi_3310	0.79	-0.4
3,912,912	+		Echvi_3310	0.80	+0.0
3,913,006	+				+0.2
3,913,007	-				-0.7
3,913,029	-				-0.9
3,913,042	+				+0.1
3,913,043	-				+1.4
3,913,089	+				+1.6
3,913,230	-		Echvi_3311	0.19	+1.9
3,913,233	+				+1.6
3,913,260	+		Echvi_3311	0.22	+1.6
3,913,558	+		Echvi_3311	0.54	+1.2
3,913,699	-		Echvi_3311	0.70	+0.6
3,913,703	-		Echvi_3311	0.70	+3.2
3,913,811	+		Echvi_3311	0.82	+0.0
3,913,896	-				+0.0
3,913,896	-				+0.7
3,913,985	-				-1.7
3,913,985	-				-0.7
3,913,985	-				-1.6
3,913,985	-				-0.0