Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3296

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,897,499	+				+0.2
3,897,500	-				-0.7
3,897,509	-				-2.5
3,897,509	-				+0.0
3,897,513	+				+0.6
3,897,513	+				+0.7
3,897,513	+				-0.7
3,897,513	+				-0.7
3,897,514	-				+0.8
3,897,514	-				+0.5
3,897,514	-				+1.7
3,897,514	-				-0.2
3,897,514	-				+1.3
3,897,552	-				+0.0
3,897,556	-				+1.1
3,897,556	-				+1.6
3,897,576	+				+1.6
3,897,577	-				-0.4
3,897,577	-				-0.2
3,897,577	-				+0.6
3,897,603	+				+0.6
3,897,624	+				+0.2
3,897,628	-				-1.1
3,897,651	-				+0.5
3,897,726	-		Echvi_3295	0.14	-1.9
3,897,752	+		Echvi_3295	0.18	+0.5
3,897,752	+		Echvi_3295	0.18	-1.4
3,897,763	+		Echvi_3295	0.19	-2.4
3,897,764	-		Echvi_3295	0.20	-1.0
3,897,764	-		Echvi_3295	0.20	-1.1
3,897,785	+		Echvi_3295	0.23	-2.3
3,897,785	+		Echvi_3295	0.23	+0.9
3,897,785	+		Echvi_3295	0.23	-0.2
3,897,785	+		Echvi_3295	0.23	-0.2
3,897,785	+		Echvi_3295	0.23	-0.2
3,897,785	+		Echvi_3295	0.23	-1.0
3,897,786	-		Echvi_3295	0.23	+0.3
3,897,786	-		Echvi_3295	0.23	+0.6
3,897,786	-		Echvi_3295	0.23	-1.2
3,897,809	+		Echvi_3295	0.27	-0.5
3,897,809	+		Echvi_3295	0.27	-0.2
3,897,809	+		Echvi_3295	0.27	-0.1
3,897,810	-		Echvi_3295	0.27	+0.3
3,897,810	-		Echvi_3295	0.27	+3.6
3,897,810	-		Echvi_3295	0.27	-0.3
3,897,810	-		Echvi_3295	0.27	+0.5
3,897,814	-		Echvi_3295	0.27	-0.3
3,897,814	-		Echvi_3295	0.27	+1.6
3,898,005	+		Echvi_3295	0.57	-1.0
3,898,006	-		Echvi_3295	0.57	+0.6
3,898,053	+		Echvi_3295	0.65	+0.9
3,898,053	+		Echvi_3295	0.65	-1.0
3,898,053	+		Echvi_3295	0.65	-0.3
3,898,053	+		Echvi_3295	0.65	-0.7
3,898,054	-		Echvi_3295	0.65	-1.2
3,898,063	+		Echvi_3295	0.66	+2.6
3,898,063	+		Echvi_3295	0.66	+0.0
3,898,066	-		Echvi_3295	0.67	-0.1
3,898,095	+		Echvi_3295	0.71	+1.1
3,898,132	-		Echvi_3295	0.77	+0.6
3,898,132	-		Echvi_3295	0.77	-0.5
3,898,155	+		Echvi_3295	0.81	+1.3
3,898,212	+		Echvi_3295	0.90	+0.4
3,898,213	-		Echvi_3295	0.90	+0.4
3,898,215	-				+1.0
3,898,260	-				+0.1
3,898,276	-				-2.2
3,898,295	+				-1.5
3,898,296	-				-0.3
3,898,296	-				+0.1
3,898,337	-				-0.6
3,898,346	+				+0.9
3,898,346	+				-0.1
3,898,369	+				+2.3
3,898,415	-				-0.7
3,898,426	-				-2.7
3,898,460	-				-3.0
3,898,568	+		Echvi_3296	0.19	-0.4
3,898,568	+		Echvi_3296	0.19	+1.0
3,898,568	+		Echvi_3296	0.19	-0.7
3,898,569	-		Echvi_3296	0.19	-2.4
3,898,569	-		Echvi_3296	0.19	+0.0
3,898,633	+		Echvi_3296	0.26	-2.0
3,898,633	+		Echvi_3296	0.26	-2.4
3,898,633	+		Echvi_3296	0.26	-1.2
3,898,725	+		Echvi_3296	0.35	-1.5
3,898,947	+				-0.4
3,898,959	+		Echvi_3296	0.59	-1.9
3,899,027	-		Echvi_3296	0.66	-0.2
3,899,035	+		Echvi_3296	0.67	-1.2
3,899,186	-		Echvi_3296	0.83	-1.4
3,899,219	-		Echvi_3296	0.86	-1.9
3,899,290	+				-1.0
3,899,345	+				-1.9
3,899,346	-				-0.1
3,899,346	-				-0.4
3,899,365	-				-1.2
3,899,376	+				+0.5
3,899,377	-				+1.3
3,899,431	+				-1.9
3,899,442	+				+0.6
3,899,476	+				+0.3
3,899,476	+				+1.6
3,899,476	+				+0.0
3,899,484	-				-2.7
3,899,484	-				-3.3
3,899,530	+				-0.4
3,899,531	-				+0.6
3,899,574	-				-1.2
3,899,588	+		Echvi_3297	0.10	+0.5
3,899,589	-		Echvi_3297	0.10	+0.9
3,899,772	-		Echvi_3297	0.21	+0.2
3,899,772	-		Echvi_3297	0.21	-0.7
3,899,777	+		Echvi_3297	0.21	-2.0
3,899,778	-		Echvi_3297	0.21	+0.3
3,899,869	+		Echvi_3297	0.26	+0.4
3,899,870	-		Echvi_3297	0.26	-1.6
3,899,870	-		Echvi_3297	0.26	+0.1
3,899,870	-		Echvi_3297	0.26	-0.4
3,899,873	+		Echvi_3297	0.26	+0.3
3,899,873	+		Echvi_3297	0.26	+0.2
3,899,873	+		Echvi_3297	0.26	-0.2
3,899,873	+		Echvi_3297	0.26	-1.2
3,899,900	+		Echvi_3297	0.28	-1.8
3,899,900	+		Echvi_3297	0.28	-1.7
3,899,901	-		Echvi_3297	0.28	-1.0
3,899,901	-		Echvi_3297	0.28	+0.2
3,899,901	-		Echvi_3297	0.28	-0.5
3,900,062	+		Echvi_3297	0.37	+1.7
3,900,065	+		Echvi_3297	0.37	+0.2
3,900,160	+		Echvi_3297	0.43	-0.7
3,900,196	+		Echvi_3297	0.45	+0.1