Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3286

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,888,181	+		Echvi_3285	0.68	-2.2
3,888,182	-		Echvi_3285	0.68	-1.0
3,888,182	-		Echvi_3285	0.68	+2.1
3,888,184	+		Echvi_3285	0.68	-0.4
3,888,246	+		Echvi_3285	0.74	+0.9
3,888,246	+		Echvi_3285	0.74	+1.5
3,888,266	+		Echvi_3285	0.76	-0.3
3,888,267	-		Echvi_3285	0.76	+1.6
3,888,327	+		Echvi_3285	0.82	-2.7
3,888,406	+		Echvi_3285	0.89	-0.5
3,888,407	-		Echvi_3285	0.89	+2.6
3,888,407	-				+1.0
3,888,410	+		Echvi_3285	0.90	+0.0
3,888,410	+		Echvi_3285	0.90	-0.4
3,888,411	-		Echvi_3285	0.90	+0.3
3,888,411	-		Echvi_3285	0.90	-1.2
3,888,451	-				-0.2
3,888,499	+				-0.9
3,888,510	+				+0.6
3,888,510	+				-0.7
3,888,511	-				-2.0
3,888,522	-				-0.2
3,888,573	+				-0.6
3,888,619	+				+1.2
3,888,619	+				-1.7
3,888,620	-				-1.2
3,888,819	+				+1.0
3,888,819	+				-0.4
3,889,006	+				+0.5
3,889,069	+				-1.5
3,889,106	-				+1.6
3,889,106	-				-1.1
3,889,111	+				+0.2
3,889,111	+				-1.0
3,889,114	+				-0.4
3,889,119	+				+0.3
3,889,124	-				-0.6
3,889,124	-				+0.4
3,889,132	-				+0.4
3,889,134	+				+0.9
3,889,168	+				-1.5
3,889,190	+				-0.6
3,889,193	+				+0.4
3,889,193	+				-0.5
3,889,193	+				+0.4
3,889,196	+				+0.1
3,889,228	-				-0.3
3,889,262	+				-0.7
3,889,262	+				-1.2
3,889,262	+				-1.1
3,889,262	+				-0.2
3,889,263	-				-0.6
3,889,263	-				+0.7
3,889,268	+				-0.1
3,889,268	+				-0.8
3,889,268	+				+0.2
3,889,269	-				-0.1
3,889,270	+				+3.9
3,889,270	+				+0.0
3,889,271	-				+1.7
3,889,271	-				+0.6
3,889,271	-				-1.1
3,889,271	-				-1.6
3,889,276	+				-1.2
3,889,276	+				-0.1
3,889,277	-				-1.5
3,889,277	-				+1.0
3,889,345	+		Echvi_3286	0.16	-1.1
3,889,371	+		Echvi_3286	0.19	-1.1
3,889,371	+		Echvi_3286	0.19	-1.0
3,889,372	-		Echvi_3286	0.19	-2.2
3,889,372	-		Echvi_3286	0.19	-1.2
3,889,378	+		Echvi_3286	0.19	-0.9
3,889,404	+		Echvi_3286	0.22	-0.1
3,889,404	+		Echvi_3286	0.22	-1.3
3,889,405	-		Echvi_3286	0.22	-1.1
3,889,405	-		Echvi_3286	0.22	-1.4
3,889,405	-		Echvi_3286	0.22	-0.9
3,889,656	-		Echvi_3286	0.47	-0.4
3,889,656	-		Echvi_3286	0.47	+0.1
3,889,663	-		Echvi_3286	0.47	+1.5
3,889,672	+		Echvi_3286	0.48	-1.2
3,889,706	+		Echvi_3286	0.51	-0.2
3,889,706	+		Echvi_3286	0.51	+0.1
3,889,717	+		Echvi_3286	0.52	-1.0
3,889,745	+		Echvi_3286	0.55	+0.8
3,889,751	+		Echvi_3286	0.56	-0.3
3,889,751	+		Echvi_3286	0.56	-1.6
3,889,751	+		Echvi_3286	0.56	-0.1
3,889,751	+		Echvi_3286	0.56	-1.1
3,889,751	+		Echvi_3286	0.56	+0.6
3,889,751	+		Echvi_3286	0.56	-0.7
3,889,751	+		Echvi_3286	0.56	+0.7
3,889,751	+		Echvi_3286	0.56	-0.6
3,889,751	+		Echvi_3286	0.56	-0.2
3,889,752	-		Echvi_3286	0.56	-2.4
3,889,752	-		Echvi_3286	0.56	-1.8
3,889,752	-		Echvi_3286	0.56	+0.2
3,889,752	-		Echvi_3286	0.56	-2.2
3,889,752	-		Echvi_3286	0.56	+0.6
3,889,752	-		Echvi_3286	0.56	-0.5
3,889,752	-		Echvi_3286	0.56	-1.2
3,889,752	-		Echvi_3286	0.56	+1.9
3,889,753	+		Echvi_3286	0.56	+0.7
3,889,753	+		Echvi_3286	0.56	-0.2
3,889,753	+		Echvi_3286	0.56	+1.2
3,889,754	-		Echvi_3286	0.56	-0.7
3,889,754	-		Echvi_3286	0.56	-3.0
3,889,754	-		Echvi_3286	0.56	-0.7
3,889,754	-		Echvi_3286	0.56	+0.5
3,889,754	-		Echvi_3286	0.56	+0.0
3,889,754	-		Echvi_3286	0.56	+0.1
3,889,754	-		Echvi_3286	0.56	+0.5
3,889,754	-		Echvi_3286	0.56	-1.6
3,889,780	+		Echvi_3286	0.59	-0.9
3,889,806	+		Echvi_3286	0.61	-1.6
3,889,806	+		Echvi_3286	0.61	-0.4
3,889,806	+		Echvi_3286	0.61	+1.0
3,889,807	-		Echvi_3286	0.61	+1.3
3,889,807	-		Echvi_3286	0.61	+1.0
3,889,807	-		Echvi_3286	0.61	-1.1
3,889,974	-		Echvi_3286	0.78	-1.7
3,889,974	-		Echvi_3286	0.78	+1.2
3,889,974	-		Echvi_3286	0.78	+0.7
3,889,977	-		Echvi_3286	0.78	-0.1
3,889,977	-		Echvi_3286	0.78	+0.3
3,889,977	-				+0.6
3,889,977	-		Echvi_3286	0.78	-1.9
3,889,977	-		Echvi_3286	0.78	-2.2
3,889,977	-		Echvi_3286	0.78	+0.0
3,890,014	-		Echvi_3286	0.82	-0.3
3,890,083	+		Echvi_3286	0.88	-2.0
3,890,083	+		Echvi_3286	0.88	-3.0
3,890,159	-				+1.1
3,890,177	-				-2.0
3,890,203	-				-0.2
3,890,223	-				+0.8
3,890,231	+				-0.6
3,890,231	+				-1.2
3,890,235	+				-0.8
3,890,235	+				-0.1
3,890,235	+				-0.1
3,890,235	+				-0.1
3,890,236	-				-0.4
3,890,236	-				+0.1
3,890,236	-				+1.0
3,890,285	+				-2.8
3,890,285	+				+0.3
3,890,286	-				+1.1
3,890,286	-				-0.4
3,890,286	-				-0.6
3,890,297	+				+0.3
3,890,297	+				-0.1
3,890,297	+				+1.2
3,890,297	+				-0.1
3,890,297	+				-0.6
3,890,297	+				+0.1
3,890,297	+				-0.8
3,890,298	-				-0.8
3,890,298	-				+1.3
3,890,306	-				-0.0
3,890,327	-				-0.5
3,890,393	+				-0.5
3,890,394	-				+1.4
3,890,394	-				-2.4
3,890,396	+				-1.4
3,890,405	-				+0.5
3,890,484	+				+3.9
3,890,484	+				+0.1
3,890,484	+				+0.6
3,890,484	+				-0.3
3,890,485	-				-0.1
3,890,485	-				-2.0
3,890,485	-				+0.0
3,890,632	-				-0.3
3,890,647	+				-2.3
3,890,659	+				-1.2
3,890,659	+				-0.3
3,890,659	+				+0.4
3,890,659	+				+0.0
3,890,683	+				+1.0
3,890,747	+				-1.4
3,890,747	+				+0.3
3,890,747	+				-0.3
3,890,820	+				+0.2
3,890,938	-				-0.6
3,890,974	+				+0.5
3,890,975	-				+0.4
3,890,979	-				+0.0
3,891,039	+				-0.7
3,891,039	+				-0.4
3,891,040	-				-2.0
3,891,040	-				-1.6
3,891,083	+		Echvi_3287	0.31	+0.8
3,891,110	+		Echvi_3287	0.53	+0.9
3,891,152	+		Echvi_3287	0.87	+0.5
3,891,152	+		Echvi_3287	0.87	-0.1