Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3240

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,842,312	+		Echvi_3239	0.53	-1.0
3,842,312	+		Echvi_3239	0.53	+0.2
3,842,312	+				+0.0
3,842,313	-		Echvi_3239	0.53	-0.5
3,842,326	+		Echvi_3239	0.54	+0.5
3,842,326	+		Echvi_3239	0.54	-0.7
3,842,327	-		Echvi_3239	0.54	-1.6
3,842,347	+		Echvi_3239	0.55	-1.2
3,842,354	+		Echvi_3239	0.55	+0.3
3,842,368	+		Echvi_3239	0.56	-1.8
3,842,407	-		Echvi_3239	0.58	-0.5
3,842,490	+		Echvi_3239	0.62	-1.9
3,842,570	+		Echvi_3239	0.65	+1.1
3,842,622	+		Echvi_3239	0.68	-0.5
3,842,623	-		Echvi_3239	0.68	-0.7
3,842,676	+		Echvi_3239	0.70	-1.0
3,842,676	+		Echvi_3239	0.70	+0.5
3,842,676	+		Echvi_3239	0.70	-0.7
3,842,676	+		Echvi_3239	0.70	-1.0
3,842,676	+		Echvi_3239	0.70	-0.2
3,842,808	+		Echvi_3239	0.77	+0.0
3,842,870	+		Echvi_3239	0.80	+0.0
3,842,923	+		Echvi_3239	0.82	+0.4
3,842,923	+		Echvi_3239	0.82	-3.0
3,842,924	-		Echvi_3239	0.82	+2.6
3,842,929	+		Echvi_3239	0.83	+0.3
3,843,246	+				-2.0
3,843,246	+				-0.7
3,843,258	+				-0.9
3,843,298	+				-0.1
3,843,413	+				-1.5
3,843,548	+		Echvi_3240	0.17	-0.8
3,843,548	+		Echvi_3240	0.17	-0.3
3,843,550	+		Echvi_3240	0.17	-0.4
3,843,550	+		Echvi_3240	0.17	-1.9
3,843,550	+		Echvi_3240	0.17	-1.6
3,843,550	+		Echvi_3240	0.17	+2.0
3,843,591	+		Echvi_3240	0.20	-1.7
3,843,595	+		Echvi_3240	0.20	-0.4
3,843,815	+		Echvi_3240	0.35	-1.1
3,843,826	+		Echvi_3240	0.36	-1.6
3,844,013	+		Echvi_3240	0.49	+0.4
3,844,188	+		Echvi_3240	0.61	-2.4
3,844,219	+		Echvi_3240	0.63	+1.3
3,844,219	+		Echvi_3240	0.63	+0.5
3,844,361	+		Echvi_3240	0.73	-2.4
3,844,739	+				+0.6
3,845,046	+		Echvi_3241	0.65	-0.9
3,845,087	+		Echvi_3241	0.78	+0.2
3,845,091	+		Echvi_3241	0.80	-1.2
3,845,147	+				-1.7
3,845,297	+				+1.2
3,845,297	+				-0.2
3,845,364	+				-0.0
3,845,531	+		Echvi_3242	0.15	+0.4
3,845,569	+		Echvi_3242	0.20	-1.7
3,845,675	+		Echvi_3242	0.32	+0.6
3,845,724	+		Echvi_3242	0.38	+1.6
3,845,760	+		Echvi_3242	0.42	-1.0