Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3044

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,636,735	+		Echvi_3043	0.26	+1.5
3,636,879	+		Echvi_3043	0.39	+3.0
3,636,880	-		Echvi_3043	0.39	+3.2
3,636,880	-		Echvi_3043	0.39	+1.7
3,636,971	-		Echvi_3043	0.47	-0.9
3,637,226	+		Echvi_3043	0.70	+4.2
3,637,226	+		Echvi_3043	0.70	-0.2
3,637,227	-				+1.6
3,637,262	+		Echvi_3043	0.73	+1.4
3,637,272	-		Echvi_3043	0.74	+1.2
3,637,286	+		Echvi_3043	0.75	+1.9
3,637,295	-		Echvi_3043	0.76	+1.4
3,637,302	+		Echvi_3043	0.76	+2.7
3,637,302	+		Echvi_3043	0.76	+2.5
3,637,479	+				+5.1
3,637,479	+				+3.3
3,637,479	+				+2.4
3,637,479	+				+4.6
3,637,480	-				+0.4
3,637,481	+				+3.1
3,637,623	+				-0.3
3,637,623	+				+0.4
3,637,624	-				-0.4
3,637,626	+				+1.2
3,637,631	+				-1.2
3,637,632	-				-0.6
3,637,635	+				-1.0
3,637,719	+		Echvi_3044	0.17	-1.9
3,637,719	+		Echvi_3044	0.17	+0.0
3,637,720	-		Echvi_3044	0.17	-2.5
3,637,720	-		Echvi_3044	0.17	-3.5
3,637,720	-		Echvi_3044	0.17	-1.1
3,637,725	+		Echvi_3044	0.18	-0.3
3,637,726	-		Echvi_3044	0.19	-1.0
3,637,946	+		Echvi_3044	0.66	-0.7
3,637,966	-		Echvi_3044	0.70	-1.7
3,637,976	-		Echvi_3044	0.72	-2.0
3,638,003	-		Echvi_3044	0.78	-1.0
3,638,007	+		Echvi_3044	0.79	-1.1
3,638,008	-		Echvi_3044	0.79	+0.6
3,638,008	-		Echvi_3044	0.79	-1.7
3,638,012	-		Echvi_3044	0.80	+1.0
3,638,055	-		Echvi_3044	0.89	-2.3
3,638,067	+				-1.6
3,638,067	+				-1.4
3,638,104	+				-0.1
3,638,144	-				-0.1
3,638,157	+				-1.9
3,638,157	+				-1.9
3,638,157	+				+0.0
3,638,157	+				-2.5
3,638,256	+		Echvi_3045	0.21	-4.1
3,638,274	-		Echvi_3045	0.25	-2.5
3,638,347	-		Echvi_3045	0.37	-1.2
3,638,398	-		Echvi_3045	0.46	-1.9
3,638,402	+		Echvi_3045	0.47	-0.9
3,638,403	-		Echvi_3045	0.47	-2.8
3,638,403	-		Echvi_3045	0.47	-1.4
3,638,421	-		Echvi_3045	0.50	-2.5
3,638,465	-		Echvi_3045	0.58	-4.1
3,638,471	+		Echvi_3045	0.59	-2.4
3,638,483	+		Echvi_3045	0.61	-0.4
3,638,485	+		Echvi_3045	0.61	-3.4
3,638,486	-		Echvi_3045	0.61	-2.3
3,638,520	-		Echvi_3045	0.67	-0.7
3,638,520	-		Echvi_3045	0.67	-0.6
3,638,520	-		Echvi_3045	0.67	-0.4
3,638,541	-		Echvi_3045	0.71	+0.0
3,638,578	-		Echvi_3045	0.77	-2.0
3,638,584	+		Echvi_3045	0.78	-2.8
3,638,591	-		Echvi_3045	0.79	-1.3
3,638,687	-				-1.6
3,638,687	-				+0.0
3,638,723	+				-0.7
3,638,723	+				-0.9
3,638,724	-				-1.4
3,638,726	+				+1.6
3,638,739	+				-1.6
3,638,740	-				-0.6
3,638,751	-				-2.9
3,638,908	+		Echvi_3046	0.24	-1.3
3,638,914	-		Echvi_3046	0.25	-1.9
3,638,945	+		Echvi_3046	0.28	-3.2
3,638,974	-		Echvi_3046	0.32	-0.6
3,639,082	-		Echvi_3046	0.44	-0.6