Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2992

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,575,032	+		Echvi_2991	0.25	-0.4
3,575,033	-		Echvi_2991	0.25	-0.1
3,575,068	+		Echvi_2991	0.29	-1.1
3,575,069	-		Echvi_2991	0.29	+1.1
3,575,069	-		Echvi_2991	0.29	+1.8
3,575,069	-		Echvi_2991	0.29	-2.4
3,575,183	+		Echvi_2991	0.41	+1.2
3,575,304	-		Echvi_2991	0.53	+0.0
3,575,470	+		Echvi_2991	0.70	+2.6
3,575,470	+		Echvi_2991	0.70	-1.4
3,575,544	+		Echvi_2991	0.78	+0.2
3,575,545	-		Echvi_2991	0.78	-0.4
3,575,565	-		Echvi_2991	0.80	+0.7
3,575,576	+		Echvi_2991	0.81	+0.2
3,575,580	+		Echvi_2991	0.82	-0.4
3,575,580	+		Echvi_2991	0.82	-0.7
3,575,580	+		Echvi_2991	0.82	-0.1
3,575,581	-		Echvi_2991	0.82	+1.2
3,575,581	-		Echvi_2991	0.82	+0.2
3,575,588	+		Echvi_2991	0.82	-0.5
3,575,637	+		Echvi_2991	0.87	+0.4
3,575,638	-		Echvi_2991	0.87	+0.5
3,575,671	-				+0.5
3,575,783	+				+0.2
3,575,783	+				+0.1
3,575,783	+				-1.1
3,575,784	-				+1.4
3,575,784	-				+0.4
3,575,788	-				-1.0
3,575,789	+				+1.9
3,575,789	+				-1.0
3,575,790	-				+1.2
3,575,790	-				-0.3
3,575,805	-				-0.5
3,575,805	-				+0.8
3,575,815	+				-2.3
3,575,815	+				-0.2
3,575,816	-				-0.4
3,575,816	-				-2.3
3,575,816	-				+1.8
3,575,829	+				-0.0
3,575,830	-				+2.4
3,575,850	-				-0.3
3,575,964	-				+0.9
3,575,977	+				+1.3
3,575,977	+				-0.7
3,575,977	+				+3.2
3,575,977	+				+0.0
3,575,978	-				+0.6
3,575,978	-				-1.2
3,575,978	-				+2.2
3,575,978	-				+1.2
3,575,978	-				+0.8
3,575,978	-				-0.3
3,575,978	-				+0.4
3,575,978	-				+0.9
3,575,990	+				+0.3
3,575,999	+				-0.7
3,575,999	+				+1.9
3,576,000	-				+0.9
3,576,030	+				+0.4
3,576,030	+				+0.0
3,576,030	+				-1.3
3,576,030	+				+0.1
3,576,031	-				+0.8
3,576,031	-				+0.6
3,576,031	-				+0.4
3,576,031	-				+0.4
3,576,075	+				+0.5
3,576,075	+				-0.5
3,576,076	-				+0.3
3,576,092	+				-1.0
3,576,093	-				+0.2
3,576,114	+				+0.0
3,576,146	+				+0.2
3,576,146	+				-0.6
3,576,146	+				-2.4
3,576,147	-				-0.7
3,576,147	-				-0.7
3,576,147	-				-0.4
3,576,147	-				+0.8
3,576,180	+		Echvi_2992	0.11	-1.7
3,576,223	-		Echvi_2992	0.13	-0.1
3,576,223	-		Echvi_2992	0.13	+2.6
3,576,253	-		Echvi_2992	0.15	+2.2
3,576,362	+		Echvi_2992	0.22	-1.6
3,576,362	+		Echvi_2992	0.22	-0.6
3,576,362	+		Echvi_2992	0.22	+1.1
3,576,362	+		Echvi_2992	0.22	-1.6
3,576,363	-		Echvi_2992	0.22	+0.7
3,576,366	+		Echvi_2992	0.22	+1.5
3,576,394	-		Echvi_2992	0.24	+1.6
3,576,394	-		Echvi_2992	0.24	+1.7
3,576,410	+		Echvi_2992	0.25	-1.7
3,576,453	+		Echvi_2992	0.28	-0.2
3,576,453	+		Echvi_2992	0.28	-0.6
3,576,454	-		Echvi_2992	0.28	+0.5
3,576,457	+		Echvi_2992	0.28	-0.7
3,576,476	-		Echvi_2992	0.29	+0.6
3,576,504	-		Echvi_2992	0.31	+0.2
3,576,549	+		Echvi_2992	0.34	-1.2
3,576,549	+		Echvi_2992	0.34	-0.6
3,576,550	-		Echvi_2992	0.34	+0.9
3,576,550	-		Echvi_2992	0.34	+0.9
3,576,551	+		Echvi_2992	0.34	-3.2
3,576,580	-		Echvi_2992	0.36	+0.0
3,576,580	-		Echvi_2992	0.36	+0.3
3,576,603	-		Echvi_2992	0.37	+1.0
3,576,606	+		Echvi_2992	0.38	+0.5
3,576,606	+		Echvi_2992	0.38	-1.1
3,576,607	-		Echvi_2992	0.38	+0.4
3,576,607	-		Echvi_2992	0.38	+0.3
3,576,607	-		Echvi_2992	0.38	-1.0
3,576,663	+		Echvi_2992	0.41	-1.0
3,576,919	+		Echvi_2992	0.57	+2.6
3,576,919	+		Echvi_2992	0.57	-0.7
3,576,966	-		Echvi_2992	0.60	-0.7
3,576,979	-		Echvi_2992	0.61	+0.0
3,577,053	+		Echvi_2992	0.66	-0.9
3,577,054	-		Echvi_2992	0.66	+0.2
3,577,088	+		Echvi_2992	0.68	+0.4
3,577,089	-		Echvi_2992	0.68	+0.5
3,577,089	-		Echvi_2992	0.68	+0.4
3,577,110	+		Echvi_2992	0.69	+0.1
3,577,111	-		Echvi_2992	0.70	+0.9
3,577,123	+		Echvi_2992	0.70	-0.4
3,577,124	-		Echvi_2992	0.70	+2.0
3,577,124	-		Echvi_2992	0.70	+1.1
3,577,143	-		Echvi_2992	0.72	+1.1
3,577,299	-		Echvi_2992	0.81	+1.6
3,577,299	-		Echvi_2992	0.81	+0.2
3,577,317	-		Echvi_2992	0.83	+0.5
3,577,337	+		Echvi_2992	0.84	-2.0
3,577,409	+		Echvi_2992	0.88	-1.0
3,577,410	-		Echvi_2992	0.88	+0.8
3,577,492	+				-1.1
3,577,592	-				+0.7
3,577,644	-		Echvi_2993	0.16	+0.4
3,577,719	+		Echvi_2993	0.36	+1.2
3,577,737	+		Echvi_2993	0.40	+0.5
3,577,738	-		Echvi_2993	0.41	+1.3
3,577,788	-		Echvi_2993	0.54	+1.6
3,577,790	-		Echvi_2993	0.54	+1.0
3,577,854	+		Echvi_2993	0.71	-0.7
3,577,855	-		Echvi_2993	0.71	+0.2
3,577,855	-		Echvi_2993	0.71	+1.0
3,577,885	+				-0.7
3,577,886	-		Echvi_2993	0.80	+0.8
3,577,931	-				-0.1
3,577,931	-				+0.2
3,577,962	-				+0.8
3,577,978	-				+0.2
3,578,100	+				+2.5