Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2958

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,534,968	-				+0.4
3,534,984	-				-2.1
3,535,008	-				+0.2
3,535,075	-				+0.2
3,535,083	+				-0.2
3,535,139	+				+2.0
3,535,140	-				-1.1
3,535,140	-				-1.7
3,535,191	+				+1.6
3,535,214	-				-1.8
3,535,225	+				-1.1
3,535,391	+				-1.0
3,535,433	+		Echvi_2958	0.12	-3.8
3,535,463	+		Echvi_2958	0.14	+0.6
3,535,477	-		Echvi_2958	0.15	-3.2
3,535,543	-		Echvi_2958	0.19	-1.9
3,535,553	+		Echvi_2958	0.20	-2.2
3,535,557	-		Echvi_2958	0.20	-0.6
3,535,632	-		Echvi_2958	0.25	-0.7
3,535,632	-		Echvi_2958	0.25	-0.3
3,535,649	+		Echvi_2958	0.26	-1.7
3,535,652	+		Echvi_2958	0.26	-1.9
3,535,653	-		Echvi_2958	0.26	-1.0
3,535,653	-		Echvi_2958	0.26	-4.1
3,535,653	-		Echvi_2958	0.26	-3.4
3,535,679	+		Echvi_2958	0.28	-4.4
3,535,679	+		Echvi_2958	0.28	-1.9
3,535,709	+		Echvi_2958	0.30	-2.5
3,535,710	-		Echvi_2958	0.30	-1.0
3,535,776	-		Echvi_2958	0.34	-1.2
3,535,820	+		Echvi_2958	0.37	-1.5
3,535,830	-		Echvi_2958	0.38	-2.1
3,535,895	+		Echvi_2958	0.42	-1.6
3,535,920	-		Echvi_2958	0.43	+0.2
3,535,920	-		Echvi_2958	0.43	+1.6
3,535,925	-		Echvi_2958	0.43	-1.6
3,535,925	-		Echvi_2958	0.43	+1.6
3,535,997	+		Echvi_2958	0.48	-0.7
3,535,998	-		Echvi_2958	0.48	-2.9
3,535,998	-		Echvi_2958	0.48	-2.7
3,536,012	-		Echvi_2958	0.49	-2.3
3,536,015	-		Echvi_2958	0.49	-1.7
3,536,015	-		Echvi_2958	0.49	-1.3
3,536,055	-		Echvi_2958	0.52	-0.7
3,536,064	-		Echvi_2958	0.52	-2.8
3,536,064	-		Echvi_2958	0.52	-3.5
3,536,092	-		Echvi_2958	0.54	-1.7
3,536,093	+		Echvi_2958	0.54	-3.1
3,536,093	+		Echvi_2958	0.54	-1.1
3,536,094	-		Echvi_2958	0.54	-1.7
3,536,189	+		Echvi_2958	0.60	-1.2
3,536,194	+		Echvi_2958	0.60	-1.0
3,536,270	+		Echvi_2958	0.65	-2.6
3,536,395	+		Echvi_2958	0.73	-2.3
3,536,396	-		Echvi_2958	0.73	-2.5
3,536,475	-				+1.6
3,536,475	-		Echvi_2958	0.78	-1.4
3,536,522	+		Echvi_2958	0.81	-2.9
3,536,523	-		Echvi_2958	0.81	-1.6
3,536,523	-		Echvi_2958	0.81	-2.6
3,536,557	+		Echvi_2958	0.83	-1.6
3,536,727	+				-1.9
3,536,728	-				-2.8
3,536,729	+				-2.7
3,536,729	+				-1.5
3,536,730	-				-2.8
3,536,730	-				-3.6
3,536,730	-				-1.0
3,536,730	-				-0.4
3,536,730	-				-1.1
3,536,732	+				-1.7
3,536,734	+				-4.1
3,536,735	-				-2.0
3,536,741	-				-1.0
3,536,741	-				+0.6
3,536,752	+				-1.2
3,536,793	-				-2.5
3,536,814	-				+0.0
3,536,814	-				-1.2
3,536,818	-				-1.7
3,536,822	-				+1.2
3,536,822	-				-0.7
3,536,953	+		Echvi_2959	0.54	+0.6
3,536,962	+		Echvi_2959	0.61	-1.8
3,536,963	-		Echvi_2959	0.61	-0.7
3,537,019	+				+0.5
3,537,019	+				+2.2
3,537,062	-				-0.3
3,537,139	+				+1.6
3,537,139	+				+1.2
3,537,139	+				+0.3
3,537,248	+		Echvi_2960	0.54	+1.5
3,537,314	+		Echvi_2960	0.87	+1.0
3,537,315	-		Echvi_2960	0.87	-0.8
3,537,315	-		Echvi_2960	0.87	-0.7
3,537,317	+		Echvi_2960	0.88	+1.7
3,537,317	+		Echvi_2960	0.88	+1.0
3,537,318	-		Echvi_2960	0.89	-2.0
3,537,318	-		Echvi_2960	0.89	-0.1
3,537,353	+				+1.8
3,537,353	+				+1.7
3,537,363	+				+1.3
3,537,384	-				+1.3
3,537,461	+				+0.9
3,537,620	+				+1.0
3,537,621	-				+1.6
3,537,697	-				-0.2