Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2918

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,492,374	+		Echvi_2917	0.35	-1.4
3,492,423	+		Echvi_2917	0.46	+1.6
3,492,424	-		Echvi_2917	0.47	-0.2
3,492,458	-		Echvi_2917	0.54	-1.7
3,492,458	-		Echvi_2917	0.54	-0.1
3,492,458	-		Echvi_2917	0.54	-1.7
3,492,461	+		Echvi_2917	0.55	-0.7
3,492,462	-		Echvi_2917	0.55	-0.2
3,492,462	-		Echvi_2917	0.55	-1.0
3,492,522	-		Echvi_2917	0.69	+0.3
3,492,617	-				+0.0
3,492,638	-				+2.1
3,492,663	+				-0.2
3,492,706	+				+0.3
3,492,719	-				+0.1
3,492,788	-				+0.7
3,492,795	+				-1.4
3,492,796	-				+0.8
3,492,814	+				-0.6
3,492,815	-				+0.2
3,492,871	+				+1.3
3,492,872	-				-0.1
3,492,872	-				-0.4
3,492,896	-				-1.1
3,492,917	-				+0.0
3,492,917	-				-2.3
3,492,917	-				-0.3
3,492,918	+				+0.0
3,492,919	-				+1.6
3,492,919	-				-0.6
3,492,919	-				-2.0
3,492,946	+				+0.9
3,492,946	+				+1.0
3,492,947	-				+0.3
3,492,947	-				-2.1
3,492,948	+				+0.7
3,492,948	+				-1.2
3,492,948	+				-1.0
3,492,948	+				+0.1
3,492,949	-				-1.4
3,492,977	-				-0.2
3,492,977	-				-0.9
3,493,015	-				+0.8
3,493,037	-				-1.6
3,493,141	-				+0.2
3,493,163	+				+1.4
3,493,195	-				+0.0
3,493,228	-				+0.3
3,493,254	+				-0.7
3,493,255	-				+0.0
3,493,299	+				+0.7
3,493,416	+		Echvi_2918	0.24	+0.1
3,493,427	+		Echvi_2918	0.25	-1.9
3,493,451	+		Echvi_2918	0.29	-2.7
3,493,451	+		Echvi_2918	0.29	+1.1
3,493,455	-		Echvi_2918	0.30	-0.5
3,493,488	+		Echvi_2918	0.35	-1.0
3,493,489	-		Echvi_2918	0.35	-0.4
3,493,504	+		Echvi_2918	0.37	-1.2
3,493,505	-		Echvi_2918	0.38	-0.2
3,493,528	+		Echvi_2918	0.41	-1.9
3,493,541	+		Echvi_2918	0.43	+0.1
3,493,547	-		Echvi_2918	0.44	+0.8
3,493,576	+		Echvi_2918	0.49	+0.3
3,493,577	-		Echvi_2918	0.49	+1.5
3,493,581	+		Echvi_2918	0.49	+0.1
3,493,582	-		Echvi_2918	0.50	-0.4
3,493,753	+		Echvi_2918	0.76	-1.0
3,493,753	+		Echvi_2918	0.76	+0.4
3,493,783	-		Echvi_2918	0.81	-0.3
3,493,827	+		Echvi_2918	0.88	+1.1
3,493,833	+		Echvi_2918	0.89	-1.2
3,493,895	+				-0.2
3,493,896	-				-1.1
3,493,904	-				+0.9
3,493,932	-				-1.2
3,494,110	+				-0.4
3,494,224	+		Echvi_2919	0.12	-4.2
3,494,477	-		Echvi_2919	0.33	-1.0
3,494,492	-		Echvi_2919	0.35	-0.7
3,494,492	-		Echvi_2919	0.35	-0.6
3,494,510	-		Echvi_2919	0.36	-0.8
3,494,606	+		Echvi_2919	0.44	+0.3
3,494,606	+		Echvi_2919	0.44	-2.7
3,494,607	-		Echvi_2919	0.44	-0.4
3,494,705	+		Echvi_2919	0.53	-0.3
3,494,706	-		Echvi_2919	0.53	-1.4
3,494,740	+		Echvi_2919	0.55	-0.1
3,494,740	+		Echvi_2919	0.55	-0.9