Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2835

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,394,866	+		Echvi_2834	0.30	-2.3
3,394,866	+		Echvi_2834	0.30	+0.2
3,394,866	+		Echvi_2834	0.30	-1.0
3,394,867	-		Echvi_2834	0.31	-1.1
3,394,870	-		Echvi_2834	0.31	-0.4
3,394,901	+		Echvi_2834	0.33	-1.2
3,394,922	+		Echvi_2834	0.35	+1.4
3,395,117	+		Echvi_2834	0.49	-1.8
3,395,117	+		Echvi_2834	0.49	-0.2
3,395,170	+		Echvi_2834	0.53	-1.7
3,395,171	-		Echvi_2834	0.53	+0.1
3,395,171	-		Echvi_2834	0.53	+0.9
3,395,171	-		Echvi_2834	0.53	-0.6
3,395,172	+		Echvi_2834	0.53	+0.5
3,395,172	+		Echvi_2834	0.53	-0.5
3,395,270	-		Echvi_2834	0.60	-0.6
3,395,270	-		Echvi_2834	0.60	+1.4
3,395,270	-		Echvi_2834	0.60	+0.1
3,395,277	-		Echvi_2834	0.61	+0.6
3,395,316	-		Echvi_2834	0.64	-0.5
3,395,335	-		Echvi_2834	0.65	-1.4
3,395,339	-		Echvi_2834	0.66	+1.2
3,395,396	+		Echvi_2834	0.70	-0.8
3,395,396	+		Echvi_2834	0.70	+0.4
3,395,397	-		Echvi_2834	0.70	+0.6
3,395,404	-		Echvi_2834	0.70	+1.6
3,395,426	+		Echvi_2834	0.72	-0.4
3,395,433	+		Echvi_2834	0.73	-0.1
3,395,433	+		Echvi_2834	0.73	-1.0
3,395,434	-		Echvi_2834	0.73	-0.3
3,395,434	-		Echvi_2834	0.73	+0.3
3,395,460	+		Echvi_2834	0.75	-1.2
3,395,497	+		Echvi_2834	0.77	-0.4
3,395,497	+		Echvi_2834	0.77	-2.3
3,395,498	-		Echvi_2834	0.77	-0.4
3,395,561	-		Echvi_2834	0.82	-2.6
3,395,562	+		Echvi_2834	0.82	-1.8
3,395,563	-		Echvi_2834	0.82	-0.3
3,395,661	-		Echvi_2834	0.89	+0.3
3,395,661	-		Echvi_2834	0.89	+0.7
3,395,710	-				+0.3
3,395,740	+				-0.2
3,395,741	-				+0.2
3,395,798	+				-0.1
3,395,799	-				-0.2
3,395,820	-				-0.3
3,396,091	+		Echvi_2835	0.22	-0.3
3,396,092	-		Echvi_2835	0.22	-0.1
3,396,092	-		Echvi_2835	0.22	-1.2
3,396,212	-		Echvi_2835	0.31	-1.1
3,396,230	-		Echvi_2835	0.32	+1.6
3,396,235	-		Echvi_2835	0.33	+1.9
3,396,235	-		Echvi_2835	0.33	-0.5
3,396,246	-		Echvi_2835	0.34	-1.7
3,396,255	+		Echvi_2835	0.34	+0.3
3,396,255	+		Echvi_2835	0.34	-1.8
3,396,437	+		Echvi_2835	0.48	-3.4
3,396,448	+		Echvi_2835	0.49	-0.6
3,396,449	-		Echvi_2835	0.49	-0.3
3,396,624	+		Echvi_2835	0.63	-0.5
3,396,647	+		Echvi_2835	0.65	-0.8
3,396,728	-		Echvi_2835	0.71	+1.0
3,396,778	-		Echvi_2835	0.75	-2.6
3,396,913	+		Echvi_2835	0.85	-1.0
3,396,913	+		Echvi_2835	0.85	-1.3
3,397,003	+				+0.3
3,397,004	-				-0.6
3,397,135	-				-0.4
3,397,193	+				+0.4
3,397,194	-				-0.0
3,397,218	+				-0.9
3,397,234	+				-2.1
3,397,234	+				-0.4
3,397,234	+				-0.0
3,397,235	-				-1.0
3,397,235	-				-0.8
3,397,283	+				+0.6
3,397,283	+				-0.7
3,397,300	+				+0.7
3,397,301	-				-0.0
3,397,331	+				+0.8
3,397,357	+				-1.7
3,397,358	-				+0.7
3,397,363	-				-2.1
3,397,372	+				+2.6
3,397,373	-				-0.4
3,397,373	-				+0.5
3,397,373	-				+0.0
3,397,384	+				+0.8
3,397,384	+				-0.4
3,397,389	-				-0.7
3,397,418	+				-0.5
3,397,517	+		Echvi_2836	0.18	-0.3
3,397,539	+		Echvi_2836	0.20	-0.1
3,397,540	-		Echvi_2836	0.21	+0.8
3,397,550	+		Echvi_2836	0.22	-1.0
3,397,551	-		Echvi_2836	0.22	+0.6
3,397,599	+		Echvi_2836	0.27	+0.9
3,397,600	-		Echvi_2836	0.27	+0.3
3,397,724	+		Echvi_2836	0.42	-0.3
3,397,725	-		Echvi_2836	0.42	-2.4
3,397,790	+		Echvi_2836	0.49	+0.5
3,397,790	+		Echvi_2836	0.49	+0.4
3,397,866	+		Echvi_2836	0.58	+1.1
3,397,866	+		Echvi_2836	0.58	+0.7
3,397,933	+		Echvi_2836	0.66	+0.5
3,397,951	+		Echvi_2836	0.68	-0.5
3,397,976	-		Echvi_2836	0.71	-2.0
3,398,029	+		Echvi_2836	0.77	+0.3
3,398,030	-		Echvi_2836	0.77	+0.6