Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2830

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,389,339	-		Echvi_2829	0.72	-0.5
3,389,339	-		Echvi_2829	0.72	-0.6
3,389,342	+		Echvi_2829	0.72	-0.8
3,389,342	+		Echvi_2829	0.72	-1.2
3,389,342	+		Echvi_2829	0.72	-0.1
3,389,342	+		Echvi_2829	0.72	-0.5
3,389,342	+		Echvi_2829	0.72	+1.2
3,389,343	-		Echvi_2829	0.72	-1.5
3,389,352	-		Echvi_2829	0.72	+0.0
3,389,352	-		Echvi_2829	0.72	-0.3
3,389,352	-		Echvi_2829	0.72	+1.0
3,389,352	-		Echvi_2829	0.72	-0.7
3,389,359	+		Echvi_2829	0.72	+0.3
3,389,373	+		Echvi_2829	0.73	-1.2
3,389,374	-		Echvi_2829	0.73	-0.8
3,389,427	-		Echvi_2829	0.74	-1.4
3,389,510	+		Echvi_2829	0.77	+2.2
3,389,510	+		Echvi_2829	0.77	-0.6
3,389,515	-		Echvi_2829	0.77	-0.2
3,389,553	+		Echvi_2829	0.78	-0.2
3,389,553	+		Echvi_2829	0.78	+0.0
3,389,566	+		Echvi_2829	0.78	-1.0
3,389,566	+		Echvi_2829	0.78	-1.5
3,389,581	+		Echvi_2829	0.79	-1.1
3,389,592	+		Echvi_2829	0.79	+0.0
3,389,600	-		Echvi_2829	0.79	-0.2
3,389,642	-		Echvi_2829	0.81	+0.2
3,389,642	-		Echvi_2829	0.81	-0.5
3,389,681	-		Echvi_2829	0.82	+0.5
3,389,787	-		Echvi_2829	0.85	-0.2
3,389,831	-		Echvi_2829	0.86	+0.6
3,389,889	-		Echvi_2829	0.88	-0.1
3,389,894	+		Echvi_2829	0.88	-0.8
3,389,894	+		Echvi_2829	0.88	+0.4
3,389,895	-		Echvi_2829	0.88	-0.5
3,389,895	-		Echvi_2829	0.88	-0.6
3,389,895	-		Echvi_2829	0.88	-1.7
3,389,979	+				+0.2
3,389,980	-				-0.3
3,389,980	-				-0.7
3,390,012	+				-1.5
3,390,012	+				-1.5
3,390,020	+				-1.2
3,390,020	+				+0.2
3,390,020	+				-2.2
3,390,020	+				-1.0
3,390,021	-				-0.3
3,390,080	-				+0.1
3,390,094	+				-1.1
3,390,112	+				-0.0
3,390,113	-				-1.1
3,390,113	-				+0.1
3,390,113	-				-0.8
3,390,113	-				-0.4
3,390,128	-				-1.5
3,390,147	+				+0.2
3,390,147	+				-2.3
3,390,147	+				-0.1
3,390,147	+				+0.2
3,390,155	+				-0.4
3,390,177	+				-0.3
3,390,178	-				-0.2
3,390,178	-				+0.1
3,390,178	-				-0.3
3,390,178	-				+0.1
3,390,188	+				-0.4
3,390,188	+				-1.1
3,390,189	-				-2.1
3,390,189	-				+0.1
3,390,189	-				-0.8
3,390,192	-				-1.5
3,390,192	-				-0.8
3,390,192	-				-0.5
3,390,206	-				+0.0
3,390,219	+				-0.9
3,390,223	+				-0.4
3,390,224	-				-1.0
3,390,224	-				+0.4
3,390,224	-				+0.0
3,390,224	-				+1.1
3,390,224	-				-0.5
3,390,228	-				+0.0
3,390,228	-				+1.6
3,390,234	+				-0.4
3,390,252	-				-0.9
3,390,252	-				-1.1
3,390,268	+				-0.1
3,390,269	-				+0.4
3,390,269	-				-1.8
3,390,269	-				+0.8
3,390,289	+				+0.6
3,390,298	+				+0.3
3,390,306	+				-1.5
3,390,352	+				-1.2
3,390,937	+		Echvi_2830	0.72	-0.4
3,390,960	+		Echvi_2830	0.75	-1.5
3,390,960	+		Echvi_2830	0.75	-1.9
3,391,023	+		Echvi_2830	0.82	-1.9
3,391,080	+		Echvi_2830	0.88	-1.0
3,391,176	+				-1.6
3,391,315	+				-0.8