Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2814

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,368,583	-		Echvi_2813	0.58	+1.2
3,368,634	+		Echvi_2813	0.60	-0.8
3,368,644	-		Echvi_2813	0.61	+3.2
3,368,644	-		Echvi_2813	0.61	-3.1
3,368,817	+				+0.6
3,368,817	+		Echvi_2813	0.68	+0.6
3,368,842	-		Echvi_2813	0.69	-0.4
3,368,842	-		Echvi_2813	0.69	-0.9
3,368,876	-		Echvi_2813	0.71	-0.8
3,369,078	-		Echvi_2813	0.80	-1.2
3,369,183	-		Echvi_2813	0.84	-1.8
3,369,222	+		Echvi_2813	0.86	-1.4
3,369,223	-		Echvi_2813	0.86	+0.6
3,369,223	-		Echvi_2813	0.86	-0.5
3,369,227	-		Echvi_2813	0.86	+0.4
3,369,227	-		Echvi_2813	0.86	-0.4
3,369,236	+		Echvi_2813	0.87	+0.5
3,369,273	+		Echvi_2813	0.88	+1.0
3,369,273	+		Echvi_2813	0.88	-0.2
3,369,273	+		Echvi_2813	0.88	+1.0
3,369,274	-		Echvi_2813	0.88	+0.6
3,369,446	+				+2.2
3,369,449	-				-0.7
3,369,544	-				-1.8
3,369,550	+				+3.2
3,369,551	-				+1.6
3,369,645	+				-0.1
3,369,645	+				-0.4
3,369,646	-				-1.9
3,369,646	-				-0.9
3,369,646	-				+0.1
3,369,647	+				-0.9
3,369,647	+				+0.4
3,369,647	+				+1.0
3,369,647	+				-0.3
3,369,778	-				-3.4
3,369,839	+		Echvi_2814	0.13	-1.2
3,369,882	+		Echvi_2814	0.15	+0.3
3,369,939	+		Echvi_2814	0.18	-1.0
3,369,939	+		Echvi_2814	0.18	-2.2
3,369,940	-		Echvi_2814	0.18	-0.9
3,369,940	-		Echvi_2814	0.18	-2.2
3,370,168	+		Echvi_2814	0.29	-1.2
3,370,169	-		Echvi_2814	0.30	-2.7
3,370,393	+		Echvi_2814	0.41	-0.7
3,370,394	-		Echvi_2814	0.41	-0.0
3,370,512	+		Echvi_2814	0.47	+0.6
3,370,512	+		Echvi_2814	0.47	-2.5
3,370,609	+		Echvi_2814	0.52	-1.8
3,370,644	-		Echvi_2814	0.53	-0.2
3,370,663	+		Echvi_2814	0.54	-3.0
3,370,664	-		Echvi_2814	0.54	-1.0
3,370,739	+		Echvi_2814	0.58	-1.3
3,370,739	+		Echvi_2814	0.58	-1.9
3,370,784	-		Echvi_2814	0.60	+0.5
3,370,791	-		Echvi_2814	0.61	-2.8
3,370,794	-		Echvi_2814	0.61	-0.6
3,370,819	-		Echvi_2814	0.62	+0.9
3,370,871	+		Echvi_2814	0.65	-1.2
3,370,871	+		Echvi_2814	0.65	-2.8
3,370,872	-		Echvi_2814	0.65	-1.7
3,370,986	+		Echvi_2814	0.71	-1.8
3,370,987	-		Echvi_2814	0.71	-1.1
3,371,018	+		Echvi_2814	0.72	-0.7
3,371,031	-		Echvi_2814	0.73	+1.5
3,371,038	+		Echvi_2814	0.73	-0.7
3,371,039	-		Echvi_2814	0.73	+0.6
3,371,166	-		Echvi_2814	0.80	+0.3
3,371,243	+		Echvi_2814	0.83	-0.4
3,371,244	-		Echvi_2814	0.83	-1.4
3,371,269	-		Echvi_2814	0.85	+0.1
3,371,289	-		Echvi_2814	0.86	-1.1
3,371,303	+		Echvi_2814	0.86	-1.0
3,371,395	+				-0.9
3,371,396	-				-0.5
3,371,414	+				-3.3
3,371,415	-				-1.6
3,371,480	+				-0.7
3,371,480	+				-1.6
3,371,498	-				+0.1
3,371,498	-				-1.6
3,371,501	+				-2.2
3,371,520	-				-0.4
3,371,520	-				-1.3
3,371,528	+				-2.5
3,371,528	+				-0.2
3,371,592	-				-0.9
3,371,595	-				-0.9
3,371,609	-				-1.1
3,371,610	+				+0.4
3,371,610	+				-0.1
3,371,672	+				-2.0
3,371,673	-				+1.4
3,371,716	+				-0.3
3,371,717	-				+0.3
3,371,717	-				+2.3
3,371,717	-				+1.9
3,371,718	+				-1.3
3,371,718	+				-0.4
3,371,720	+				-0.7
3,371,721	-				+1.3
3,371,808	+		Echvi_2815	0.23	-1.4
3,371,808	+		Echvi_2815	0.23	+0.2
3,371,884	+		Echvi_2815	0.39	-0.0
3,371,885	-		Echvi_2815	0.39	+0.6
3,371,900	+		Echvi_2815	0.42	-0.8
3,371,919	-		Echvi_2815	0.46	+0.1
3,371,955	+		Echvi_2815	0.53	-0.9
3,371,955	+		Echvi_2815	0.53	-1.0
3,371,955	+		Echvi_2815	0.53	-3.9
3,371,956	-		Echvi_2815	0.53	-0.0
3,371,956	-		Echvi_2815	0.53	+2.2
3,371,975	+		Echvi_2815	0.57	-2.5
3,371,975	+		Echvi_2815	0.57	-1.7
3,371,981	+		Echvi_2815	0.58	-1.8
3,371,982	-		Echvi_2815	0.58	+0.8
3,372,023	+		Echvi_2815	0.67	-2.5
3,372,024	-		Echvi_2815	0.67	+0.5
3,372,024	-		Echvi_2815	0.67	+0.1
3,372,055	-		Echvi_2815	0.73	+0.5
3,372,055	-		Echvi_2815	0.73	-1.4
3,372,065	+		Echvi_2815	0.75	-0.3
3,372,134	+		Echvi_2815	0.89	-0.6
3,372,142	-				-0.2
3,372,152	+				-1.2
3,372,170	+				-2.2
3,372,226	+				-3.0
3,372,260	+				-1.4
3,372,261	-				+0.5
3,372,261	-				-0.1
3,372,265	+				-0.8
3,372,266	-				+0.5
3,372,269	+				-2.4
3,372,269	+				-0.7
3,372,269	+				-2.9
3,372,270	-				+0.9
3,372,274	+				-1.9
3,372,274	+				-1.4
3,372,279	+				-2.4
3,372,280	-				+1.2
3,372,299	+				-1.7
3,372,306	+				-1.2
3,372,313	+				-1.7
3,372,314	-				-0.6