Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2785

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,328,271	+		Echvi_2783	0.87	+1.1
3,328,311	-		Echvi_2783	0.89	+1.1
3,328,371	-				+1.7
3,328,485	-				-0.2
3,328,504	+				+2.8
3,328,504	+				+1.6
3,328,543	+				-0.6
3,328,547	+				+2.5
3,328,581	+				-1.9
3,328,581	+				-0.1
3,328,581	+				+1.2
3,328,592	+				+0.3
3,328,592	+				+0.6
3,328,593	-				-0.7
3,329,048	+				+0.4
3,329,048	+				+0.3
3,329,056	+				+0.1
3,329,090	+				+1.5
3,329,091	-				-2.0
3,329,099	+				-1.9
3,329,172	-				-1.5
3,329,186	-				-1.8
3,329,186	-				-2.5
3,329,217	-				-0.7
3,329,217	-				-1.8
3,329,218	+				+3.2
3,329,228	+				+1.0
3,329,229	-				-2.4
3,329,232	+				+0.2
3,329,233	-				-4.1
3,329,250	+				-0.7
3,329,250	+				-0.6
3,329,250	+				-1.2
3,329,250	+				+0.5
3,329,296	-				-1.7
3,329,307	+				-0.9
3,329,326	+				+0.7
3,329,326	+				-1.4
3,329,327	-				-0.7
3,329,381	+		Echvi_2785	0.11	-2.0
3,329,381	+		Echvi_2785	0.11	-1.3
3,329,382	-		Echvi_2785	0.11	-0.9
3,329,396	+		Echvi_2785	0.12	-1.1
3,329,400	+		Echvi_2785	0.12	-2.0
3,329,568	+		Echvi_2785	0.24	-0.9
3,329,568	+		Echvi_2785	0.24	-2.1
3,329,569	-		Echvi_2785	0.24	-2.9
3,329,569	-		Echvi_2785	0.24	+1.7
3,329,569	-		Echvi_2785	0.24	-1.7
3,329,661	-		Echvi_2785	0.31	+0.3
3,329,704	-		Echvi_2785	0.34	-1.1
3,329,704	-		Echvi_2785	0.34	-1.7
3,329,704	-		Echvi_2785	0.34	+0.1
3,329,711	+		Echvi_2785	0.34	-2.1
3,329,712	-		Echvi_2785	0.34	-2.0
3,329,712	-		Echvi_2785	0.34	-0.6
3,329,712	-		Echvi_2785	0.34	+0.4
3,329,712	-		Echvi_2785	0.34	-1.5
3,329,776	-		Echvi_2785	0.39	-0.9
3,329,776	-		Echvi_2785	0.39	-2.0
3,329,776	-		Echvi_2785	0.39	-1.2
3,329,776	-		Echvi_2785	0.39	-0.5
3,329,781	-		Echvi_2785	0.39	+0.2
3,329,781	-		Echvi_2785	0.39	-4.0
3,329,817	+		Echvi_2785	0.42	-2.3
3,329,981	-		Echvi_2785	0.54	-2.8
3,329,983	-		Echvi_2785	0.54	-2.3
3,329,983	-		Echvi_2785	0.54	-3.3
3,330,106	-		Echvi_2785	0.63	-0.9
3,330,106	-		Echvi_2785	0.63	+0.2
3,330,129	-		Echvi_2785	0.64	-0.4
3,330,137	+		Echvi_2785	0.65	-0.7
3,330,244	+		Echvi_2785	0.73	-1.1
3,330,261	-		Echvi_2785	0.74	-1.8
3,330,299	-		Echvi_2785	0.77	-0.7
3,330,341	+		Echvi_2785	0.80	-1.8
3,330,396	+		Echvi_2785	0.84	+0.1
3,330,433	-		Echvi_2785	0.86	-1.3
3,330,449	+		Echvi_2785	0.87	-0.9
3,330,449	+		Echvi_2785	0.87	-1.6
3,330,450	-		Echvi_2785	0.87	-0.9
3,330,493	+				+0.9
3,330,494	-				-1.7
3,330,494	-				-2.4
3,330,537	+				-0.9
3,330,538	-				+1.7
3,330,539	+				+0.7
3,330,539	+				-1.5
3,330,540	-				-0.3
3,330,585	+				-0.1
3,330,620	+				+0.7
3,330,621	-				-1.8
3,330,622	+				+0.1
3,330,622	+				+0.5
3,330,635	+				-0.5
3,330,830	+				-0.5
3,330,830	+				-1.0
3,330,830	+				+0.7
3,330,830	+				-0.5
3,330,831	-				-0.8
3,330,856	+				+0.3
3,330,857	-				-1.0
3,330,862	+				-0.9
3,330,937	-				-0.1
3,330,937	-				+1.0
3,331,039	+		Echvi_2787	0.33	+0.1
3,331,054	-		Echvi_2787	0.36	-0.3
3,331,056	+		Echvi_2787	0.37	+0.2
3,331,057	-		Echvi_2787	0.37	-1.8
3,331,229	-		Echvi_2787	0.79	-2.0
3,331,242	+		Echvi_2787	0.82	-0.2
3,331,242	+		Echvi_2787	0.82	-0.4
3,331,242	+		Echvi_2787	0.82	-0.3
3,331,243	-		Echvi_2787	0.82	-0.4
3,331,243	-		Echvi_2787	0.82	-0.8
3,331,246	+		Echvi_2787	0.83	-1.9
3,331,246	+		Echvi_2787	0.83	-1.5
3,331,246	+		Echvi_2787	0.83	-1.0
3,331,249	+		Echvi_2787	0.83	-0.8
3,331,250	-		Echvi_2787	0.84	-0.3
3,331,412	+				+1.1
3,331,413	-				-0.6