Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2771

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,309,175	+		Echvi_2770	0.54	-1.5
3,309,176	-		Echvi_2770	0.54	+0.7
3,309,231	-		Echvi_2770	0.57	-0.9
3,309,233	-		Echvi_2770	0.57	+0.7
3,309,241	+		Echvi_2770	0.57	+0.5
3,309,265	+		Echvi_2770	0.59	-1.3
3,309,293	-		Echvi_2770	0.60	-1.0
3,309,304	+		Echvi_2770	0.61	+1.0
3,309,335	+		Echvi_2770	0.62	-0.9
3,309,338	+		Echvi_2770	0.63	-1.3
3,309,349	+		Echvi_2770	0.63	+0.0
3,309,350	-		Echvi_2770	0.63	+1.7
3,309,377	-		Echvi_2770	0.65	-0.3
3,309,377	-		Echvi_2770	0.65	+0.4
3,309,433	-		Echvi_2770	0.68	-1.1
3,309,566	-		Echvi_2770	0.75	+1.1
3,309,599	+		Echvi_2770	0.77	+2.9
3,309,660	+		Echvi_2770	0.80	-0.1
3,309,661	-		Echvi_2770	0.80	-0.2
3,309,697	+		Echvi_2770	0.82	-1.5
3,309,759	+		Echvi_2770	0.85	-1.2
3,309,815	-		Echvi_2770	0.89	-1.4
3,309,868	+				-2.7
3,309,869	-				-1.7
3,309,902	+				+1.3
3,309,903	-				+2.7
3,309,950	+				-1.9
3,309,950	+				+0.9
3,309,968	-				-0.3
3,309,968	-				+0.1
3,310,011	-				+1.0
3,310,023	-				+0.7
3,310,057	+				+0.4
3,310,057	+				-0.3
3,310,057	+				-2.0
3,310,057	+				+0.2
3,310,061	-				-0.4
3,310,061	-				-0.0
3,310,063	+				-0.2
3,310,064	-				+0.0
3,310,067	+				+0.8
3,310,067	+				+0.7
3,310,067	+				-1.2
3,310,067	+				+2.7
3,310,068	-				+0.0
3,310,068	-				-2.6
3,310,068	-				-0.2
3,310,068	-				-0.6
3,310,068	-				+0.5
3,310,068	-				+0.2
3,310,097	-				+1.0
3,310,099	-				-0.5
3,310,170	-				+0.5
3,310,204	-				-0.8
3,310,309	-				-0.1
3,310,309	-				-0.3
3,310,309	-				+2.5
3,310,442	+		Echvi_2771	0.11	-1.1
3,310,649	-		Echvi_2771	0.20	-1.3
3,310,704	+		Echvi_2771	0.22	+0.8
3,310,705	-		Echvi_2771	0.22	+2.4
3,310,705	-		Echvi_2771	0.22	+0.4
3,310,705	-		Echvi_2771	0.22	-1.6
3,310,708	-		Echvi_2771	0.22	+1.0
3,310,858	+		Echvi_2771	0.28	-0.5
3,310,859	-		Echvi_2771	0.28	-1.1
3,310,860	+		Echvi_2771	0.28	-1.8
3,310,860	+		Echvi_2771	0.28	-0.9
3,310,861	-		Echvi_2771	0.28	+0.1
3,310,861	-		Echvi_2771	0.28	-0.1
3,310,902	-		Echvi_2771	0.30	-0.7
3,310,924	-		Echvi_2771	0.31	-0.3
3,311,030	-		Echvi_2771	0.35	+1.4
3,311,147	+		Echvi_2771	0.40	-1.2
3,311,148	-		Echvi_2771	0.40	-1.0
3,311,150	+		Echvi_2771	0.40	-2.9
3,311,150	+		Echvi_2771	0.40	+0.7
3,311,151	-		Echvi_2771	0.40	-1.5
3,311,151	-		Echvi_2771	0.40	-0.4
3,311,151	-		Echvi_2771	0.40	-2.8
3,311,344	-		Echvi_2771	0.48	-1.4
3,311,344	-		Echvi_2771	0.48	-0.7
3,311,344	-		Echvi_2771	0.48	+0.1
3,311,348	-		Echvi_2771	0.48	+1.2
3,311,365	+		Echvi_2771	0.48	+0.4
3,311,366	-		Echvi_2771	0.48	+1.1
3,311,511	-		Echvi_2771	0.54	+0.7
3,311,517	-		Echvi_2771	0.55	-0.3
3,311,594	+		Echvi_2771	0.58	-0.3
3,311,595	-		Echvi_2771	0.58	+0.1
3,311,595	-		Echvi_2771	0.58	-0.7
3,311,614	-		Echvi_2771	0.58	+0.0
3,311,614	-		Echvi_2771	0.58	+1.9
3,311,618	+		Echvi_2771	0.59	-0.3
3,311,618	+		Echvi_2771	0.59	+0.4
3,311,618	+		Echvi_2771	0.59	+1.4
3,311,619	-		Echvi_2771	0.59	+0.2
3,311,619	-		Echvi_2771	0.59	-0.4
3,311,671	+		Echvi_2771	0.61	-0.4
3,311,761	-		Echvi_2771	0.64	+0.4
3,311,761	-		Echvi_2771	0.64	-0.9
3,311,761	-		Echvi_2771	0.64	+2.0
3,311,761	-		Echvi_2771	0.64	+1.1
3,311,761	-		Echvi_2771	0.64	-1.5
3,311,763	+		Echvi_2771	0.64	+0.4
3,311,764	-		Echvi_2771	0.64	-1.0
3,311,835	+		Echvi_2771	0.67	+0.7
3,311,835	+		Echvi_2771	0.67	-1.4
3,311,894	+		Echvi_2771	0.70	-2.0
3,311,926	+		Echvi_2771	0.71	-0.9
3,311,926	+		Echvi_2771	0.71	+0.8
3,312,010	-		Echvi_2771	0.74	-0.2
3,312,050	+		Echvi_2771	0.76	-0.9
3,312,091	-		Echvi_2771	0.78	+1.1
3,312,120	+		Echvi_2771	0.79	-1.1
3,312,120	+		Echvi_2771	0.79	-0.3
3,312,120	+		Echvi_2771	0.79	+0.0
3,312,121	-		Echvi_2771	0.79	-0.3
3,312,143	-		Echvi_2771	0.80	-3.2
3,312,201	+		Echvi_2771	0.82	-0.6
3,312,224	+		Echvi_2771	0.83	-0.5
3,312,283	+		Echvi_2771	0.85	-0.5
3,312,283	+		Echvi_2771	0.85	+0.3
3,312,284	-		Echvi_2771	0.85	-0.0
3,312,284	-		Echvi_2771	0.85	-0.3
3,312,312	+		Echvi_2771	0.87	-0.9
3,312,436	-				-2.7
3,312,438	+				+2.5
3,312,439	-				-0.5
3,312,603	-				-0.1
3,312,605	+				+0.9
3,312,606	-				-1.7
3,312,662	-				-0.9
3,312,710	+				-0.6
3,312,736	+				-0.9
3,312,736	+				-0.7
3,312,737	-				-1.8
3,312,796	-				-2.0
3,312,796	-				-0.6
3,312,796	-				+0.3
3,312,823	+				+0.3
3,312,837	+				-1.9
3,312,838	-				-0.2
3,312,844	+				+1.3
3,312,862	+				+0.4
3,312,863	-				-1.7
3,312,863	-				+1.1
3,312,863	-				+1.2
3,312,878	+				-0.3
3,312,878	+				+2.3
3,312,878	+				+1.3
3,312,879	-				+0.0
3,312,879	-				+2.1
3,312,879	-				-0.5
3,312,988	+				-1.4
3,313,004	-				+0.7
3,313,013	+				-1.5
3,313,037	+				+0.4
3,313,048	+				-0.9
3,313,049	-				+0.2
3,313,050	+				-1.5
3,313,073	-				-1.3
3,313,076	+				+0.5
3,313,094	+				-0.3
3,313,094	+				+2.2
3,313,094	+				+0.9
3,313,105	-				+0.7
3,313,111	+				-1.8
3,313,111	+				+1.5
3,313,112	-				+0.2
3,313,182	-				-0.1
3,313,203	+				+0.7
3,313,203	+				+0.3
3,313,204	-				+1.3
3,313,227	+				-0.3
3,313,227	+				-1.1
3,313,228	-				-0.1
3,313,229	+				+0.9
3,313,243	-				+0.7
3,313,250	+				+1.1
3,313,251	-				+0.5
3,313,251	-				-1.7
3,313,251	-				-0.7
3,313,262	-				+2.5
3,313,262	-				-0.8
3,313,265	-				+0.3
3,313,267	-				+0.0
3,313,283	-				-1.5
3,313,283	-				-0.9
3,313,289	+				+0.2
3,313,289	+				-1.4
3,313,411	-		Echvi_2772	0.19	-0.9
3,313,413	-		Echvi_2772	0.19	-2.2
3,313,444	+		Echvi_2772	0.26	+1.4
3,313,504	+		Echvi_2772	0.39	-2.2
3,313,639	+		Echvi_2772	0.69	-0.7
3,313,640	-		Echvi_2772	0.69	-2.8