Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2759

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,285,873	-				-0.9
3,285,876	+				-1.5
3,285,876	+				-0.4
3,285,877	-				+0.1
3,286,118	-				-0.8
3,286,119	+				-1.2
3,286,132	-				-0.7
3,286,164	-				-1.8
3,286,164	-				+0.5
3,286,240	+				-0.6
3,286,317	+				-0.8
3,286,318	-				-1.2
3,286,318	-				-0.5
3,286,349	-				+0.1
3,286,349	-				-0.6
3,286,391	-				+0.4
3,286,433	+				-0.1
3,286,434	-				-0.1
3,286,459	-				-1.2
3,286,459	-				+1.1
3,286,459	-				-2.2
3,286,465	+				-0.7
3,286,466	-				+0.7
3,286,515	+				+0.1
3,286,525	+				+0.9
3,286,525	+				+2.7
3,286,527	+				+0.2
3,286,528	-				+0.3
3,286,569	+				-1.0
3,286,570	-				+0.7
3,286,570	-				+1.9
3,286,615	+				+0.9
3,286,679	+		Echvi_2759	0.12	-0.5
3,286,680	-		Echvi_2759	0.12	+0.1
3,286,680	-		Echvi_2759	0.12	+1.2
3,286,715	+		Echvi_2759	0.15	-0.2
3,286,716	-		Echvi_2759	0.15	+0.1
3,286,716	-		Echvi_2759	0.15	+1.5
3,286,716	-		Echvi_2759	0.15	-0.9
3,286,716	-		Echvi_2759	0.15	+0.1
3,286,718	-		Echvi_2759	0.15	+2.7
3,286,722	+		Echvi_2759	0.16	+0.0
3,286,743	-		Echvi_2759	0.17	+1.4
3,286,748	-		Echvi_2759	0.18	+1.4
3,286,748	-		Echvi_2759	0.18	-0.5
3,286,801	+		Echvi_2759	0.22	-0.4
3,286,802	-		Echvi_2759	0.22	-0.8
3,286,891	-		Echvi_2759	0.30	-1.2
3,286,891	-		Echvi_2759	0.30	-0.3
3,286,891	-		Echvi_2759	0.30	-1.7
3,286,895	-		Echvi_2759	0.30	-0.2
3,286,910	+		Echvi_2759	0.32	-0.3
3,286,914	-		Echvi_2759	0.32	-0.7
3,286,942	-		Echvi_2759	0.34	+0.2
3,287,070	+		Echvi_2759	0.45	-0.1
3,287,070	-		Echvi_2759	0.45	+0.2
3,287,071	-		Echvi_2759	0.46	+0.9
3,287,071	-		Echvi_2759	0.46	-0.0
3,287,071	-		Echvi_2759	0.46	+1.9
3,287,073	-		Echvi_2759	0.46	+0.2
3,287,093	+		Echvi_2759	0.47	+0.2
3,287,094	-		Echvi_2759	0.48	+0.1
3,287,094	-		Echvi_2759	0.48	-3.1
3,287,094	-		Echvi_2759	0.48	-0.5
3,287,100	-		Echvi_2759	0.48	+0.4
3,287,117	+		Echvi_2759	0.49	+0.1
3,287,118	-		Echvi_2759	0.50	-0.2
3,287,118	-		Echvi_2759	0.50	+0.8
3,287,118	-		Echvi_2759	0.50	+0.6
3,287,147	-		Echvi_2759	0.52	-0.3
3,287,172	-		Echvi_2759	0.54	-0.1
3,287,181	+		Echvi_2759	0.55	-0.3
3,287,182	-		Echvi_2759	0.55	-0.1
3,287,198	+		Echvi_2759	0.56	-0.2
3,287,199	-		Echvi_2759	0.57	-0.4
3,287,199	-		Echvi_2759	0.57	+0.6
3,287,212	+		Echvi_2759	0.58	-0.3
3,287,213	-		Echvi_2759	0.58	+0.4
3,287,257	-		Echvi_2759	0.62	+0.6
3,287,375	+		Echvi_2759	0.72	+0.2
3,287,375	+		Echvi_2759	0.72	+1.1
3,287,376	-		Echvi_2759	0.72	+1.1
3,287,376	-		Echvi_2759	0.72	-2.4
3,287,378	+		Echvi_2759	0.72	-1.2
3,287,378	+		Echvi_2759	0.72	-0.4
3,287,378	+		Echvi_2759	0.72	+0.4
3,287,378	+		Echvi_2759	0.72	-1.6
3,287,378	+		Echvi_2759	0.72	-2.2
3,287,378	+		Echvi_2759	0.72	+0.2
3,287,379	-		Echvi_2759	0.72	+0.8
3,287,379	-		Echvi_2759	0.72	+0.2
3,287,379	-		Echvi_2759	0.72	-0.2
3,287,379	-		Echvi_2759	0.72	+0.0
3,287,388	-		Echvi_2759	0.73	-1.3
3,287,388	-		Echvi_2759	0.73	-1.2
3,287,399	+		Echvi_2759	0.74	-0.6
3,287,429	+		Echvi_2759	0.76	+0.0
3,287,429	+		Echvi_2759	0.76	-0.4
3,287,435	-		Echvi_2759	0.77	+0.6
3,287,462	-		Echvi_2759	0.79	+0.5
3,287,476	+		Echvi_2759	0.80	-1.2
3,287,495	-		Echvi_2759	0.82	+0.3
3,287,567	+		Echvi_2759	0.88	-0.3
3,287,576	+		Echvi_2759	0.89	-0.7
3,287,658	+				+1.1
3,287,702	+				-1.3
3,287,726	-				-0.3
3,287,876	+				+0.0
3,287,944	-				+1.9
3,287,957	-				-0.1
3,288,044	-				+0.6
3,288,044	-				-1.7
3,288,045	+				-0.3
3,288,046	-				+0.5
3,288,089	+				+0.5
3,288,271	+				+0.7
3,288,271	+				+1.1
3,288,272	-				-0.3
3,288,273	+				-0.9
3,288,274	-				-1.5
3,288,296	+		Echvi_2760	0.11	-2.0
3,288,297	-		Echvi_2760	0.11	-0.1
3,288,297	-		Echvi_2760	0.11	-1.8
3,288,415	+		Echvi_2760	0.13	+1.1
3,288,476	+		Echvi_2760	0.15	-0.8
3,288,476	+		Echvi_2760	0.15	+1.7
3,288,477	-		Echvi_2760	0.15	-0.0
3,288,477	-		Echvi_2760	0.15	-0.8
3,288,477	-		Echvi_2760	0.15	+0.1
3,288,477	-		Echvi_2760	0.15	-0.1
3,288,477	-		Echvi_2760	0.15	-0.3
3,288,579	+		Echvi_2760	0.17	-0.2
3,288,617	+		Echvi_2760	0.18	-0.1