Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2730

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,251,411	-		Echvi_2729	0.64	+1.1
3,251,496	-		Echvi_2729	0.71	-0.2
3,251,514	-		Echvi_2729	0.73	-0.2
3,251,517	+		Echvi_2729	0.73	-0.9
3,251,586	-		Echvi_2729	0.79	-0.2
3,251,634	+		Echvi_2729	0.83	-0.9
3,251,665	+		Echvi_2729	0.86	-0.9
3,251,665	+		Echvi_2729	0.86	-1.8
3,251,666	-		Echvi_2729	0.86	+2.2
3,251,666	-		Echvi_2729	0.86	-0.6
3,251,666	-		Echvi_2729	0.86	-1.4
3,251,672	+		Echvi_2729	0.86	+1.1
3,251,697	-		Echvi_2729	0.88	-1.2
3,251,697	-		Echvi_2729	0.88	+0.7
3,251,777	+				-1.3
3,251,778	-				-2.2
3,251,779	+				+3.2
3,251,779	+				+2.3
3,251,780	-				+1.1
3,251,780	-				+0.6
3,251,782	-				+1.2
3,251,782	-				+1.6
3,251,782	-				-0.1
3,251,925	+				-0.7
3,251,926	-				+0.2
3,251,926	-				+0.9
3,251,926	-				+0.7
3,251,931	-				-0.1
3,251,937	+				-0.5
3,252,014	-				-0.0
3,252,023	+				+0.3
3,252,059	-				-1.9
3,252,079	+				+1.7
3,252,140	-				-0.0
3,252,266	+				-0.1
3,252,268	+				+0.6
3,252,290	-				+0.9
3,252,301	+				-0.7
3,252,310	+				-0.0
3,252,310	+				+1.7
3,252,310	+				-0.1
3,252,311	-				+0.1
3,252,311	-				+0.1
3,252,311	-				+0.0
3,252,323	+				-0.9
3,252,407	+				+0.7
3,252,440	+		Echvi_2730	0.12	+1.1
3,252,467	+		Echvi_2730	0.15	-1.3
3,252,468	-		Echvi_2730	0.15	+0.1
3,252,473	-		Echvi_2730	0.16	-0.2
3,252,575	+		Echvi_2730	0.29	-1.5
3,252,577	+		Echvi_2730	0.29	-0.3
3,252,577	+		Echvi_2730	0.29	+1.7
3,252,577	+		Echvi_2730	0.29	-0.2
3,252,578	-		Echvi_2730	0.29	-2.3
3,252,578	-		Echvi_2730	0.29	-0.4
3,252,585	+		Echvi_2730	0.30	-0.8
3,252,599	+		Echvi_2730	0.32	+0.3
3,252,640	-		Echvi_2730	0.37	-1.2
3,252,722	-		Echvi_2730	0.48	-0.6
3,252,722	-		Echvi_2730	0.48	-2.7
3,252,774	+		Echvi_2730	0.54	+0.9
3,252,775	-		Echvi_2730	0.55	-1.9
3,252,775	-		Echvi_2730	0.55	+1.0
3,252,967	+		Echvi_2730	0.79	+0.5
3,252,996	+		Echvi_2730	0.83	-2.3
3,252,996	+		Echvi_2730	0.83	+1.1
3,252,997	-		Echvi_2730	0.83	-1.3
3,253,005	-		Echvi_2730	0.84	+0.6
3,253,110	+				-0.5
3,253,135	-				+0.4
3,253,184	+				+0.5
3,253,199	+				+0.6
3,253,218	+				+0.4
3,253,242	-		Echvi_2731	0.12	-2.6
3,253,293	+		Echvi_2731	0.16	-1.0
3,253,294	-		Echvi_2731	0.16	+1.7
3,253,305	+		Echvi_2731	0.17	-1.0
3,253,348	-		Echvi_2731	0.21	+0.5
3,253,420	+		Echvi_2731	0.28	+2.2
3,253,420	+		Echvi_2731	0.28	+1.2
3,253,432	-				+1.2
3,253,495	+		Echvi_2731	0.35	+1.1
3,253,496	-		Echvi_2731	0.35	+1.7
3,253,496	-		Echvi_2731	0.35	-1.5
3,253,496	-		Echvi_2731	0.35	+0.1
3,253,659	-		Echvi_2731	0.50	+0.7
3,253,663	-		Echvi_2731	0.50	-1.1
3,253,722	+		Echvi_2731	0.56	+0.2
3,253,722	+		Echvi_2731	0.56	+0.7
3,253,723	-		Echvi_2731	0.56	-0.6
3,253,725	+		Echvi_2731	0.56	+2.3
3,253,755	+		Echvi_2731	0.59	-0.7
3,253,756	-		Echvi_2731	0.59	+0.7
3,253,861	-		Echvi_2731	0.69	+0.7
3,253,861	-		Echvi_2731	0.69	-0.1
3,253,862	+		Echvi_2731	0.69	-1.5
3,253,863	-		Echvi_2731	0.69	+0.7
3,253,872	+		Echvi_2731	0.70	-0.2
3,253,872	+		Echvi_2731	0.70	-1.8
3,253,873	-		Echvi_2731	0.70	-1.2
3,253,873	-		Echvi_2731	0.70	+1.0
3,253,873	-		Echvi_2731	0.70	-1.5
3,253,928	+		Echvi_2731	0.75	+1.7
3,253,951	-		Echvi_2731	0.77	-0.3
3,253,963	+		Echvi_2731	0.78	+0.6
3,253,963	+		Echvi_2731	0.78	-1.0
3,253,963	+		Echvi_2731	0.78	+0.5
3,254,061	+		Echvi_2731	0.87	+1.0
3,254,072	-		Echvi_2731	0.88	+1.2