Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2682

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,188,329	-		Echvi_2681	0.65	-1.3
3,188,350	+		Echvi_2681	0.66	-1.7
3,188,350	+		Echvi_2681	0.66	-0.2
3,188,350	+		Echvi_2681	0.66	+0.9
3,188,350	+		Echvi_2681	0.66	+2.2
3,188,351	-		Echvi_2681	0.66	+1.5
3,188,351	-		Echvi_2681	0.66	+0.7
3,188,375	+		Echvi_2681	0.67	+0.2
3,188,377	+		Echvi_2681	0.67	-0.4
3,188,381	+		Echvi_2681	0.67	+0.1
3,188,382	-		Echvi_2681	0.67	-0.5
3,188,382	-		Echvi_2681	0.67	-0.2
3,188,566	+		Echvi_2681	0.74	-1.6
3,188,567	-		Echvi_2681	0.74	-0.8
3,188,611	+		Echvi_2681	0.75	-1.6
3,188,611	+		Echvi_2681	0.75	+0.5
3,188,612	-		Echvi_2681	0.75	+0.6
3,188,612	-		Echvi_2681	0.75	+0.2
3,188,633	-		Echvi_2681	0.76	+0.1
3,188,668	-		Echvi_2681	0.77	+0.9
3,188,668	-		Echvi_2681	0.77	+0.8
3,188,742	+		Echvi_2681	0.80	-1.6
3,188,743	-		Echvi_2681	0.80	+1.8
3,188,743	-		Echvi_2681	0.80	-0.3
3,188,808	-		Echvi_2681	0.82	-0.5
3,188,831	+		Echvi_2681	0.83	+0.8
3,188,831	+		Echvi_2681	0.83	-0.3
3,188,833	+		Echvi_2681	0.83	+0.7
3,188,834	-		Echvi_2681	0.83	-0.7
3,188,834	-		Echvi_2681	0.83	-2.0
3,188,834	-		Echvi_2681	0.83	+1.2
3,188,834	-		Echvi_2681	0.83	-0.2
3,188,894	-		Echvi_2681	0.85	-0.3
3,188,944	+		Echvi_2681	0.87	+0.9
3,188,945	-		Echvi_2681	0.87	+0.7
3,188,945	-		Echvi_2681	0.87	-1.9
3,188,945	-		Echvi_2681	0.87	+2.3
3,188,945	-		Echvi_2681	0.87	+3.8
3,189,001	+		Echvi_2681	0.89	-0.1
3,189,001	+		Echvi_2681	0.89	+1.2
3,189,005	+		Echvi_2681	0.89	+1.4
3,189,006	-		Echvi_2681	0.89	-0.0
3,189,007	+		Echvi_2681	0.89	+0.2
3,189,011	+		Echvi_2681	0.89	+1.9
3,189,012	-		Echvi_2681	0.89	+0.3
3,189,015	+		Echvi_2681	0.89	-1.9
3,189,054	+				+0.2
3,189,141	+				-1.6
3,189,158	-				+0.6
3,189,158	-				+0.5
3,189,161	-				+0.5
3,189,161	-				+2.9
3,189,184	+				-0.8
3,189,210	+				+0.5
3,189,211	-				-2.2
3,189,217	-				+0.3
3,189,220	-				+0.1
3,189,268	+				+0.1
3,189,269	-				-0.9
3,189,269	-				-1.1
3,189,278	+				+0.3
3,189,278	+				+1.0
3,189,279	-				+0.3
3,189,279	-				-0.6
3,189,282	+				+0.6
3,189,310	-				-2.2
3,189,347	-				+1.4
3,189,347	-				-0.7
3,189,348	+				+1.7
3,189,349	-				-1.7
3,189,358	+				-0.9
3,189,359	-				-0.2
3,189,366	+				-2.4
3,189,373	-				-0.7
3,189,373	-				+0.3
3,189,373	-				-0.4
3,189,375	+				+0.4
3,189,376	-				-0.9
3,189,376	-				+0.5
3,189,535	+		Echvi_2682	0.10	-0.3
3,189,535	+		Echvi_2682	0.10	+0.1
3,189,536	-		Echvi_2682	0.11	+0.7
3,189,577	+		Echvi_2682	0.13	-0.0
3,189,596	+		Echvi_2682	0.14	+0.1
3,189,596	+		Echvi_2682	0.14	+1.0
3,189,709	-		Echvi_2682	0.19	-0.1
3,189,782	+		Echvi_2682	0.23	-0.9
3,189,783	-		Echvi_2682	0.23	+0.2
3,189,783	-		Echvi_2682	0.23	+0.7
3,189,804	+		Echvi_2682	0.24	-2.0
3,189,804	+		Echvi_2682	0.24	-0.5
3,189,811	-		Echvi_2682	0.24	-2.3
3,189,848	-		Echvi_2682	0.26	+0.6
3,189,851	-		Echvi_2682	0.26	-0.1
3,190,067	-		Echvi_2682	0.37	-0.7
3,190,067	-		Echvi_2682	0.37	+0.4
3,190,090	-		Echvi_2682	0.39	+0.8
3,190,103	-		Echvi_2682	0.39	+1.2
3,190,109	+		Echvi_2682	0.40	-2.9
3,190,145	+		Echvi_2682	0.41	+1.0
3,190,227	-		Echvi_2682	0.46	+1.5
3,190,288	-		Echvi_2682	0.49	+0.7
3,190,294	-		Echvi_2682	0.49	-1.7
3,190,322	+		Echvi_2682	0.50	-0.4
3,190,322	+		Echvi_2682	0.50	+0.3
3,190,322	+		Echvi_2682	0.50	-0.7
3,190,322	+		Echvi_2682	0.50	-1.7
3,190,323	-		Echvi_2682	0.50	-1.2
3,190,323	-		Echvi_2682	0.50	-1.3
3,190,323	-		Echvi_2682	0.50	-0.3
3,190,328	-		Echvi_2682	0.51	+0.1
3,190,328	-		Echvi_2682	0.51	-0.2
3,190,356	-		Echvi_2682	0.52	+0.7
3,190,362	-		Echvi_2682	0.52	+1.1
3,190,377	-		Echvi_2682	0.53	+0.2
3,190,377	-		Echvi_2682	0.53	+0.1
3,190,378	+		Echvi_2682	0.53	-1.2
3,190,379	-		Echvi_2682	0.53	+0.0
3,190,379	-		Echvi_2682	0.53	-0.3
3,190,570	+		Echvi_2682	0.63	-2.2
3,190,595	+		Echvi_2682	0.64	-0.8
3,190,596	-		Echvi_2682	0.64	+0.7
3,190,596	-		Echvi_2682	0.64	+0.4
3,190,596	-		Echvi_2682	0.64	-0.3
3,190,596	-		Echvi_2682	0.64	+0.3
3,190,603	+		Echvi_2682	0.65	+0.0
3,190,604	-		Echvi_2682	0.65	-1.3
3,190,632	+		Echvi_2682	0.66	-0.9
3,190,681	+		Echvi_2682	0.69	-0.1
3,190,681	+		Echvi_2682	0.69	-0.5
3,190,681	+		Echvi_2682	0.69	-1.2
3,190,682	-		Echvi_2682	0.69	+0.7
3,190,682	-		Echvi_2682	0.69	+0.3
3,190,685	+		Echvi_2682	0.69	+0.2
3,190,685	+		Echvi_2682	0.69	-1.7
3,190,685	+		Echvi_2682	0.69	+1.8
3,190,685	+		Echvi_2682	0.69	+0.7
3,190,686	-		Echvi_2682	0.69	+0.2
3,190,686	-		Echvi_2682	0.69	+0.8
3,190,686	-		Echvi_2682	0.69	-0.1
3,190,878	+		Echvi_2682	0.79	+0.1
3,190,879	-		Echvi_2682	0.79	-0.3
3,190,879	-		Echvi_2682	0.79	-0.3
3,190,879	-		Echvi_2682	0.79	-0.2
3,190,959	+		Echvi_2682	0.83	-1.6
3,190,964	+		Echvi_2682	0.83	+0.5
3,190,965	-		Echvi_2682	0.83	-1.1
3,190,965	-		Echvi_2682	0.83	-0.5
3,190,965	-		Echvi_2682	0.83	-0.3
3,190,965	-		Echvi_2682	0.83	-0.8
3,191,026	+		Echvi_2682	0.86	+0.5
3,191,032	-		Echvi_2682	0.86	+0.2
3,191,052	+		Echvi_2682	0.87	+0.9
3,191,065	-		Echvi_2682	0.88	-1.9
3,191,090	-		Echvi_2682	0.89	+0.7
3,191,153	-				+0.3
3,191,204	+				-0.8
3,191,218	+				-0.7
3,191,336	+		Echvi_2683	0.11	-0.5
3,191,341	-		Echvi_2683	0.13	-0.8
3,191,451	+		Echvi_2683	0.70	-1.8
3,191,476	+		Echvi_2683	0.83	-1.6
3,191,476	+		Echvi_2683	0.83	-2.2
3,191,477	-		Echvi_2683	0.83	+0.1
3,191,516	+				-1.4
3,191,575	-				+1.1
3,191,585	-				+0.8
3,191,608	+				+0.7
3,191,621	-		Echvi_2684	0.11	-0.9
3,191,621	-		Echvi_2684	0.11	+1.3
3,191,631	+		Echvi_2684	0.12	+1.1
3,191,631	+		Echvi_2684	0.12	+2.5
3,191,631	+		Echvi_2684	0.12	-0.3
3,191,669	+		Echvi_2684	0.20	-0.9
3,191,670	-		Echvi_2684	0.20	+0.7
3,191,727	-		Echvi_2684	0.30	-0.3
3,191,732	+		Echvi_2684	0.31	+0.8
3,191,732	+		Echvi_2684	0.31	+0.1
3,191,733	-		Echvi_2684	0.31	+0.5
3,191,733	-		Echvi_2684	0.31	-0.3
3,191,733	-		Echvi_2684	0.31	+0.5
3,191,733	-		Echvi_2684	0.31	-1.2
3,191,739	+		Echvi_2684	0.33	+0.4
3,191,748	+		Echvi_2684	0.34	-0.3
3,191,748	+		Echvi_2684	0.34	+1.0
3,191,749	-		Echvi_2684	0.34	-1.3
3,191,763	-		Echvi_2684	0.37	+0.2
3,191,786	+		Echvi_2684	0.41	-0.0
3,191,787	-		Echvi_2684	0.42	-1.0
3,191,787	-		Echvi_2684	0.42	+0.5
3,191,787	-		Echvi_2684	0.42	+0.4
3,191,887	+		Echvi_2684	0.60	+1.7
3,191,895	-		Echvi_2684	0.62	-1.0
3,191,961	+		Echvi_2684	0.74	-1.1
3,191,961	+		Echvi_2684	0.74	-0.2
3,191,967	+		Echvi_2684	0.75	-0.2
3,191,968	-		Echvi_2684	0.75	-0.3
3,191,977	-		Echvi_2684	0.77	-2.0
3,192,069	+				-2.3
3,192,069	+				-0.1
3,192,189	-		Echvi_2685	0.48	-1.5
3,192,189	-		Echvi_2685	0.48	-0.9
3,192,189	-		Echvi_2685	0.48	+1.7
3,192,190	+		Echvi_2685	0.48	-0.2
3,192,191	-		Echvi_2685	0.49	-1.8
3,192,239	+		Echvi_2685	0.70	+0.7
3,192,239	+		Echvi_2685	0.70	+1.3