Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2666

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
3,162,600	+		Echvi_2665	0.30	-0.9
3,162,605	+		Echvi_2665	0.31	-1.2
3,162,605	+		Echvi_2665	0.31	-1.7
3,162,606	-		Echvi_2665	0.31	-0.1
3,162,680	+		Echvi_2665	0.36	+0.6
3,162,681	-		Echvi_2665	0.36	-1.1
3,162,718	+		Echvi_2665	0.39	-1.3
3,162,718	+		Echvi_2665	0.39	-1.8
3,162,725	-		Echvi_2665	0.39	-0.3
3,162,742	-		Echvi_2665	0.41	+1.0
3,162,746	-		Echvi_2665	0.41	-1.8
3,162,746	-		Echvi_2665	0.41	-1.4
3,162,746	-		Echvi_2665	0.41	+1.6
3,162,759	+		Echvi_2665	0.42	-0.5
3,162,768	+		Echvi_2665	0.43	-0.3
3,162,768	+		Echvi_2665	0.43	-1.5
3,162,768	+		Echvi_2665	0.43	-1.5
3,162,768	+		Echvi_2665	0.43	+3.0
3,162,769	-		Echvi_2665	0.43	-0.4
3,162,769	-		Echvi_2665	0.43	-1.2
3,162,838	+		Echvi_2665	0.48	-1.5
3,162,838	+		Echvi_2665	0.48	-0.7
3,162,838	+		Echvi_2665	0.48	+0.8
3,162,839	-		Echvi_2665	0.48	-0.4
3,162,839	-		Echvi_2665	0.48	+0.5
3,162,839	-		Echvi_2665	0.48	-0.5
3,162,839	-		Echvi_2665	0.48	-0.4
3,162,839	-		Echvi_2665	0.48	-0.8
3,162,839	-		Echvi_2665	0.48	+0.4
3,162,840	+		Echvi_2665	0.48	+2.1
3,162,863	-		Echvi_2665	0.50	+0.9
3,162,863	-		Echvi_2665	0.50	-0.6
3,162,910	+		Echvi_2665	0.53	+0.6
3,163,192	+		Echvi_2665	0.74	-2.6
3,163,252	-		Echvi_2665	0.78	+0.3
3,163,294	+		Echvi_2665	0.81	-0.9
3,163,294	+		Echvi_2665	0.81	-0.6
3,163,295	-		Echvi_2665	0.81	-1.7
3,163,295	-		Echvi_2665	0.81	-0.1
3,163,295	-		Echvi_2665	0.81	-0.4
3,163,297	-		Echvi_2665	0.82	-0.1
3,163,442	+				-1.6
3,163,491	-				+0.9
3,163,491	-				-0.7
3,163,581	-				-0.2
3,163,641	+				+0.1
3,163,652	+				+3.0
3,163,652	+				+1.3
3,163,652	+				-0.1
3,163,652	+				-0.4
3,163,652	+				+0.4
3,163,652	+				-2.7
3,163,652	+				-0.7
3,163,652	+				-1.5
3,163,653	-				+1.1
3,163,653	-				+0.2
3,163,653	-				+2.3
3,163,653	-				-0.4
3,163,653	-				-0.1
3,163,654	+				-0.4
3,163,654	+				+1.0
3,163,654	+				+0.7
3,163,654	+				+0.1
3,163,655	-				-1.3
3,163,655	-				-0.8
3,163,655	-				-0.3
3,163,655	-				-0.4
3,163,655	-				+0.3
3,163,655	-				+0.1
3,163,777	-				-0.8
3,163,812	+				-1.3
3,163,896	+		Echvi_2666	0.12	+1.0
3,163,975	+		Echvi_2666	0.15	-0.5
3,164,058	+		Echvi_2666	0.19	-1.0
3,164,060	+		Echvi_2666	0.19	+0.3
3,164,060	+		Echvi_2666	0.19	-1.7
3,164,060	+				+0.6
3,164,060	+		Echvi_2666	0.19	+0.2
3,164,061	-		Echvi_2666	0.19	+0.8
3,164,061	-		Echvi_2666	0.19	-0.3
3,164,061	-		Echvi_2666	0.19	-1.4
3,164,061	-		Echvi_2666	0.19	-0.5
3,164,061	-		Echvi_2666	0.19	+1.4
3,164,082	-		Echvi_2666	0.20	+0.6
3,164,225	+		Echvi_2666	0.26	-0.0
3,164,226	-		Echvi_2666	0.26	-2.1
3,164,256	-		Echvi_2666	0.27	-0.8
3,164,370	-		Echvi_2666	0.31	-0.8
3,164,397	+		Echvi_2666	0.33	-0.8
3,164,397	+		Echvi_2666	0.33	-0.4
3,164,398	-		Echvi_2666	0.33	-0.4
3,164,618	-		Echvi_2666	0.42	-0.5
3,164,730	+		Echvi_2666	0.46	-1.0
3,164,730	+		Echvi_2666	0.46	-0.4
3,164,730	+		Echvi_2666	0.46	+1.6
3,164,760	+		Echvi_2666	0.47	-0.4
3,164,761	-		Echvi_2666	0.47	-1.3
3,164,862	+		Echvi_2666	0.51	-0.1
3,164,862	+		Echvi_2666	0.51	-0.4
3,164,862	+		Echvi_2666	0.51	+1.9
3,164,863	-		Echvi_2666	0.52	-0.3
3,164,891	+		Echvi_2666	0.53	+0.2
3,164,891	+		Echvi_2666	0.53	-0.4
3,164,891	+		Echvi_2666	0.53	-0.4
3,164,894	+		Echvi_2666	0.53	-2.0
3,164,942	+		Echvi_2666	0.55	-1.2
3,165,015	+		Echvi_2666	0.58	-2.6
3,165,016	-		Echvi_2666	0.58	-0.7
3,165,016	-		Echvi_2666	0.58	+0.6
3,165,031	-		Echvi_2666	0.58	-0.5
3,165,040	+		Echvi_2666	0.59	-1.2
3,165,056	-		Echvi_2666	0.59	-0.7
3,165,056	-		Echvi_2666	0.59	+0.5
3,165,160	+		Echvi_2666	0.64	-0.2
3,165,160	+		Echvi_2666	0.64	-1.9
3,165,173	+		Echvi_2666	0.64	-0.9
3,165,173	+		Echvi_2666	0.64	+2.2
3,165,174	-		Echvi_2666	0.64	+0.1
3,165,174	-		Echvi_2666	0.64	+0.1
3,165,174	-		Echvi_2666	0.64	+1.2
3,165,231	-		Echvi_2666	0.66	-1.2
3,165,243	-		Echvi_2666	0.67	+1.1
3,165,269	+		Echvi_2666	0.68	-0.8
3,165,330	+		Echvi_2666	0.70	+0.1
3,165,412	-		Echvi_2666	0.74	-0.5
3,165,412	-		Echvi_2666	0.74	-0.5
3,165,412	-		Echvi_2666	0.74	-1.3
3,165,416	+		Echvi_2666	0.74	-0.2
3,165,416	+		Echvi_2666	0.74	-0.4
3,165,417	-		Echvi_2666	0.74	+1.2
3,165,422	+		Echvi_2666	0.74	-0.9
3,165,422	+		Echvi_2666	0.74	-1.2
3,165,422	+		Echvi_2666	0.74	-0.4
3,165,422	+		Echvi_2666	0.74	-1.2
3,165,423	-		Echvi_2666	0.74	+0.6
3,165,423	-		Echvi_2666	0.74	+1.6
3,165,423	-		Echvi_2666	0.74	+0.8
3,165,428	-		Echvi_2666	0.74	-0.1
3,165,518	-		Echvi_2666	0.78	-1.0
3,165,599	+		Echvi_2666	0.81	-0.4
3,165,604	-		Echvi_2666	0.82	-1.6
3,165,614	-		Echvi_2666	0.82	+0.1
3,165,838	+				-0.7
3,165,839	-				+1.2
3,165,846	+				-0.6
3,165,847	-				-1.8
3,165,864	+				-0.3
3,165,864	+				-0.9
3,165,865	-				-1.9
3,165,940	+				-1.7
3,165,940	+				+0.8
3,165,968	+				+0.6
3,165,969	-				+0.6
3,165,969	-				+0.6
3,165,997	+				+0.5
3,165,997	+				-0.4
3,165,998	-				+0.1
3,165,998	-				-0.1
3,166,000	-				-0.4
3,166,006	-				+0.2
3,166,035	+				-1.4
3,166,069	+				+1.6
3,166,078	-				-1.1
3,166,099	+				+1.1
3,166,142	-				+2.1
3,166,152	+				-1.9
3,166,152	+				+0.3
3,166,153	-				-0.0
3,166,220	-		Echvi_2667	0.10	-0.3
3,166,238	+		Echvi_2667	0.12	-0.5
3,166,312	+		Echvi_2667	0.17	-0.8
3,166,350	-		Echvi_2667	0.19	-0.4
3,166,370	-		Echvi_2667	0.21	+1.1
3,166,460	+		Echvi_2667	0.27	-1.7
3,166,460	+		Echvi_2667	0.27	-1.4
3,166,599	+		Echvi_2667	0.37	-1.8
3,166,600	-		Echvi_2667	0.37	+2.2
3,166,623	+		Echvi_2667	0.39	-2.1
3,166,628	-		Echvi_2667	0.39	-0.0
3,166,636	+		Echvi_2667	0.40	+0.1
3,166,838	-		Echvi_2667	0.54	-0.9
3,166,929	-		Echvi_2667	0.60	-0.4
3,166,961	-		Echvi_2667	0.62	+0.4
3,166,978	+		Echvi_2667	0.64	+2.1
3,166,978	+		Echvi_2667	0.64	+0.6