Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2193

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,620,785	+		Echvi_2192	0.41	-2.4
2,620,786	-		Echvi_2192	0.41	-1.1
2,620,865	-		Echvi_2192	0.47	-1.1
2,620,871	-		Echvi_2192	0.48	-0.5
2,620,975	-		Echvi_2192	0.56	-0.6
2,621,006	+		Echvi_2192	0.59	+1.0
2,621,007	-		Echvi_2192	0.59	-0.9
2,621,106	+		Echvi_2192	0.67	+5.0
2,621,154	-		Echvi_2192	0.71	+0.0
2,621,270	-		Echvi_2192	0.81	+0.2
2,621,341	-		Echvi_2192	0.87	+0.4
2,621,341	-		Echvi_2192	0.87	+0.1
2,621,341	-		Echvi_2192	0.87	+0.6
2,621,341	-		Echvi_2192	0.87	-0.4
2,621,410	-				-0.4
2,621,442	-				+0.8
2,621,586	-				+1.1
2,621,641	-				-3.4
2,621,652	-				-3.2
2,621,720	+				-2.6
2,621,721	-				-2.9
2,621,809	-		Echvi_2193	0.21	-4.6
2,621,809	-		Echvi_2193	0.21	-3.7
2,621,830	-		Echvi_2193	0.25	-0.3
2,621,865	+		Echvi_2193	0.33	-3.6
2,621,866	-		Echvi_2193	0.33	-3.1
2,621,866	-		Echvi_2193	0.33	-0.1
2,621,869	-		Echvi_2193	0.34	-2.8
2,621,878	+		Echvi_2193	0.35	-3.5
2,621,878	+		Echvi_2193	0.35	-2.7
2,621,923	-		Echvi_2193	0.45	-2.7
2,621,923	-		Echvi_2193	0.45	-3.0
2,621,923	-		Echvi_2193	0.45	-1.9
2,621,931	-		Echvi_2193	0.46	-2.9
2,621,931	-		Echvi_2193	0.46	-3.1
2,621,952	+		Echvi_2193	0.51	-3.1
2,621,965	-		Echvi_2193	0.53	-3.9
2,621,965	-		Echvi_2193	0.53	-3.7
2,622,069	+		Echvi_2193	0.75	-3.2
2,622,069	+		Echvi_2193	0.75	-3.3
2,622,070	-		Echvi_2193	0.75	-3.0
2,622,070	-		Echvi_2193	0.75	-4.6
2,622,070	-		Echvi_2193	0.75	-3.8
2,622,101	+		Echvi_2193	0.82	-2.4
2,622,101	+		Echvi_2193	0.82	-1.8
2,622,102	-		Echvi_2193	0.82	-3.5
2,622,102	-		Echvi_2193	0.82	-4.0
2,622,102	-		Echvi_2193	0.82	-0.9
2,622,111	+		Echvi_2193	0.84	-1.6
2,622,211	+				-1.6
2,622,212	-				-0.2
2,622,212	-				+0.1
2,622,212	-				-2.3
2,622,212	-				-0.3
2,622,257	+				+0.3
2,622,300	+				+0.3
2,622,301	-				+0.5
2,622,306	-				+0.1
2,622,323	-		Echvi_2194	0.12	-0.4
2,622,428	+		Echvi_2194	0.31	+1.4
2,622,429	-		Echvi_2194	0.31	+0.7
2,622,429	-		Echvi_2194	0.31	-0.9
2,622,469	-		Echvi_2194	0.39	+0.0
2,622,567	-		Echvi_2194	0.57	-1.2
2,622,567	-		Echvi_2194	0.57	+1.7
2,622,593	+		Echvi_2194	0.62	+0.1
2,622,631	-		Echvi_2194	0.69	-1.5
2,622,675	-		Echvi_2194	0.77	+0.5
2,622,797	-				-1.1
2,622,806	+				+0.2
2,622,870	-				+0.4
2,622,970	-				-1.5
2,622,972	+				-1.1
2,622,972	+				-1.1
2,622,972	+				+0.1
2,622,973	-				-0.4
2,622,973	-				+1.1
2,622,973	-				-1.2
2,622,973	-				-1.1
2,622,973	-				+0.5
2,623,026	+		Echvi_2195	0.12	-1.3
2,623,029	+		Echvi_2195	0.12	-0.6
2,623,030	-		Echvi_2195	0.12	-1.8
2,623,041	-		Echvi_2195	0.13	+0.9
2,623,086	-		Echvi_2195	0.16	+0.1
2,623,089	-				+0.7
2,623,138	-		Echvi_2195	0.20	+0.2
2,623,154	+		Echvi_2195	0.21	-0.3