Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2169

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,586,851	-		Echvi_2168	0.72	+0.3
2,586,888	+		Echvi_2168	0.78	-1.0
2,586,939	+		Echvi_2168	0.86	+0.8
2,587,022	+				+1.6
2,587,023	-				+1.0
2,587,062	+				-0.2
2,587,121	+				+1.7
2,587,121	+				+0.0
2,587,121	+				+1.8
2,587,156	-				+0.2
2,587,156	-				-1.8
2,587,156	-				+1.5
2,587,191	-				+0.5
2,587,209	+				-0.2
2,587,209	+				-0.0
2,587,209	+				-0.6
2,587,209	+				+1.1
2,587,213	+				-0.8
2,587,214	-				-0.6
2,587,214	-				+0.1
2,587,214	-				-0.6
2,587,249	+				-0.4
2,587,272	-				-0.0
2,587,285	+				+0.4
2,587,321	+				-2.8
2,587,321	+				+0.4
2,587,321	+				-1.0
2,587,322	-				+1.0
2,587,322	-				-0.9
2,587,322	-				-0.8
2,587,354	-				+0.4
2,587,354	-				-0.5
2,587,371	-				-1.5
2,587,591	+				-2.0
2,587,653	+				-0.9
2,587,673	-				-1.8
2,587,803	-				+2.3
2,587,882	+				-3.7
2,587,883	-				-0.8
2,587,931	-		Echvi_2169	0.11	-1.0
2,588,128	-		Echvi_2169	0.31	-0.8
2,588,130	-		Echvi_2169	0.31	-0.4
2,588,130	-		Echvi_2169	0.31	+0.5
2,588,176	-		Echvi_2169	0.36	-0.1
2,588,176	-		Echvi_2169	0.36	+0.3
2,588,176	-		Echvi_2169	0.36	-1.9
2,588,176	-		Echvi_2169	0.36	-0.3
2,588,176	-		Echvi_2169	0.36	-0.8
2,588,178	-		Echvi_2169	0.36	-0.6
2,588,178	-		Echvi_2169	0.36	-0.6
2,588,206	+		Echvi_2169	0.39	-0.6
2,588,206	+		Echvi_2169	0.39	-1.5
2,588,256	-		Echvi_2169	0.44	+0.7
2,588,299	+		Echvi_2169	0.48	-0.1
2,588,428	+		Echvi_2169	0.61	+1.7
2,588,455	+		Echvi_2169	0.64	-2.0
2,588,569	+		Echvi_2169	0.75	-1.1
2,588,570	-		Echvi_2169	0.76	-2.1
2,588,691	-		Echvi_2169	0.88	-0.2
2,588,776	-				-0.4
2,588,798	-				-2.4
2,588,798	-				-0.1
2,588,941	+				-0.3
2,588,941	+				-2.8
2,588,942	-				-1.6
2,588,953	+				-1.3
2,588,965	-				-1.9
2,588,966	+				+0.5
2,588,966	+				-0.7
2,588,971	+				-0.0
2,588,971	+				-1.5
2,588,972	-				-0.6
2,588,975	-				-1.8
2,588,977	-				-0.8
2,589,119	+				-0.6
2,589,120	-				-0.1
2,589,154	+				+1.2
2,589,154	+				-0.9
2,589,193	-				-1.6
2,589,201	+				+0.2
2,589,202	-				+1.2
2,589,307	+		Echvi_2170	0.11	-1.6
2,589,421	+		Echvi_2170	0.15	-0.3
2,589,422	-		Echvi_2170	0.15	+0.0
2,589,425	+		Echvi_2170	0.15	+0.3
2,589,425	+		Echvi_2170	0.15	-0.5
2,589,425	+		Echvi_2170	0.15	+0.0
2,589,425	+		Echvi_2170	0.15	+0.8
2,589,425	+		Echvi_2170	0.15	-0.2
2,589,426	-		Echvi_2170	0.15	+0.9
2,589,426	-		Echvi_2170	0.15	+0.4
2,589,426	-		Echvi_2170	0.15	-0.5
2,589,426	-		Echvi_2170	0.15	+1.2
2,589,426	-		Echvi_2170	0.15	-0.2
2,589,427	+		Echvi_2170	0.15	-0.3
2,589,427	+		Echvi_2170	0.15	-0.9
2,589,428	-		Echvi_2170	0.15	+1.0
2,589,428	-		Echvi_2170	0.15	-0.5
2,589,460	-		Echvi_2170	0.16	-1.5
2,589,463	-		Echvi_2170	0.16	-1.2
2,589,467	+		Echvi_2170	0.16	+0.5
2,589,468	-		Echvi_2170	0.16	-2.0
2,589,468	-		Echvi_2170	0.16	-1.0
2,589,477	-		Echvi_2170	0.16	+1.1
2,589,478	+		Echvi_2170	0.16	+0.6
2,589,478	+		Echvi_2170	0.16	+0.0
2,589,478	+		Echvi_2170	0.16	-0.0
2,589,478	+		Echvi_2170	0.16	+0.9
2,589,478	+		Echvi_2170	0.16	+0.7
2,589,479	-		Echvi_2170	0.16	+0.5
2,589,479	-		Echvi_2170	0.16	-0.3
2,589,479	-		Echvi_2170	0.16	-1.5
2,589,479	-		Echvi_2170	0.16	+0.7
2,589,508	+		Echvi_2170	0.17	+0.7
2,589,650	-		Echvi_2170	0.21	+2.3
2,589,769	+		Echvi_2170	0.25	+0.0
2,589,770	-		Echvi_2170	0.25	-1.5