Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2152

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,557,085	+				-0.4
2,557,115	+				-1.0
2,557,191	-				+0.5
2,557,191	-				-0.8
2,557,192	+				+0.7
2,557,192	+				+2.3
2,557,192	+				-0.6
2,557,193	-				-0.3
2,557,193	-				+0.2
2,557,198	+		Echvi_2151	0.10	-2.1
2,557,223	+		Echvi_2151	0.13	-0.8
2,557,260	-		Echvi_2151	0.17	-0.2
2,557,360	+		Echvi_2151	0.27	-1.4
2,557,361	-		Echvi_2151	0.27	+0.4
2,557,361	-		Echvi_2151	0.27	-0.2
2,557,361	-		Echvi_2151	0.27	-0.5
2,557,361	-		Echvi_2151	0.27	-0.2
2,557,361	-		Echvi_2151	0.27	-0.8
2,557,369	-		Echvi_2151	0.28	-1.6
2,557,412	-		Echvi_2151	0.32	-0.0
2,557,445	+		Echvi_2151	0.36	+0.7
2,557,445	+		Echvi_2151	0.36	-0.6
2,557,499	-		Echvi_2151	0.41	+1.1
2,557,499	-		Echvi_2151	0.41	+0.9
2,557,504	-		Echvi_2151	0.42	-0.7
2,557,587	-		Echvi_2151	0.50	-1.8
2,557,589	+		Echvi_2151	0.50	-1.7
2,557,591	+		Echvi_2151	0.51	-1.3
2,557,592	-		Echvi_2151	0.51	-1.9
2,557,597	+		Echvi_2151	0.51	-0.6
2,557,602	+		Echvi_2151	0.52	-1.2
2,557,665	+		Echvi_2151	0.58	-0.6
2,557,685	-		Echvi_2151	0.60	+0.8
2,557,692	-		Echvi_2151	0.61	+0.3
2,557,720	-		Echvi_2151	0.64	-0.2
2,557,724	+		Echvi_2151	0.64	+0.7
2,557,724	+		Echvi_2151	0.64	-1.6
2,557,724	+		Echvi_2151	0.64	+0.1
2,557,724	+		Echvi_2151	0.64	-1.5
2,557,724	+		Echvi_2151	0.64	-0.9
2,557,725	-		Echvi_2151	0.64	-1.5
2,557,725	-		Echvi_2151	0.64	-0.2
2,557,754	+		Echvi_2151	0.67	-2.0
2,557,804	-		Echvi_2151	0.73	-1.5
2,557,804	-		Echvi_2151	0.73	-0.9
2,557,923	-		Echvi_2151	0.85	-0.3
2,557,949	+		Echvi_2151	0.88	+0.1
2,557,950	-		Echvi_2151	0.88	+0.1
2,557,955	+		Echvi_2151	0.88	+0.4
2,557,964	-		Echvi_2151	0.89	+1.2
2,557,964	-		Echvi_2151	0.89	-0.0
2,557,964	-		Echvi_2151	0.89	-1.4
2,558,018	+				+0.0
2,558,019	-				+0.5
2,558,046	+				-0.7
2,558,075	+				-1.3
2,558,075	+				-1.5
2,558,075	+				-0.4
2,558,076	-				-0.8
2,558,076	-				-0.3
2,558,076	-				+0.1
2,558,077	+				-1.1
2,558,078	-				-0.5
2,558,092	+				-0.9
2,558,092	+				+0.7
2,558,096	+				-0.6
2,558,096	+				-2.9
2,558,096	+				-0.2
2,558,096	+				-1.9
2,558,097	-				+0.3
2,558,097	-				-0.0
2,558,097	-				+1.2
2,558,097	-				+0.8
2,558,099	+				-1.3
2,558,099	+				-1.4
2,558,100	-				+1.5
2,558,100	-				-0.1
2,558,100	-				-0.3
2,558,198	+				+0.1
2,558,199	-				-1.3
2,558,219	+				-3.9
2,558,220	-				+0.1
2,558,221	+				-0.3
2,558,221	+				+0.8
2,558,221	+				+0.1
2,558,221	+				-0.3
2,558,222	-				-0.0
2,558,222	-				-0.1
2,558,222	-				+0.4
2,558,222	-				-0.3
2,558,222	-				-0.1
2,558,226	+				-1.8
2,558,227	-				-1.5
2,558,279	+		Echvi_2152	0.10	-0.3
2,558,429	+		Echvi_2152	0.18	+1.0
2,558,430	-		Echvi_2152	0.18	+1.4
2,558,430	-		Echvi_2152	0.18	-0.2
2,558,471	-		Echvi_2152	0.20	-0.2
2,558,529	+		Echvi_2152	0.23	-0.9
2,558,529	+		Echvi_2152	0.23	-2.8
2,558,582	+		Echvi_2152	0.25	-1.6
2,558,583	-		Echvi_2152	0.25	-0.3
2,558,583	-		Echvi_2152	0.25	-0.1
2,558,583	-		Echvi_2152	0.25	+1.5
2,558,583	-		Echvi_2152	0.25	+0.2
2,558,583	-		Echvi_2152	0.25	-0.3
2,558,587	-		Echvi_2152	0.26	-0.6
2,558,587	-		Echvi_2152	0.26	+0.1
2,558,657	+		Echvi_2152	0.29	-1.1
2,558,658	-		Echvi_2152	0.29	-0.6
2,558,677	+		Echvi_2152	0.30	-1.6
2,558,677	+		Echvi_2152	0.30	-0.4
2,558,681	+		Echvi_2152	0.30	-0.2
2,558,682	-		Echvi_2152	0.30	+0.8
2,558,706	+		Echvi_2152	0.32	-3.6
2,558,712	+		Echvi_2152	0.32	-0.3
2,558,742	-		Echvi_2152	0.33	+0.3
2,558,749	-		Echvi_2152	0.34	+0.2
2,558,752	+		Echvi_2152	0.34	-2.2
2,558,752	+		Echvi_2152	0.34	-0.7
2,558,753	-		Echvi_2152	0.34	+0.7
2,558,753	-		Echvi_2152	0.34	+0.3
2,558,774	+		Echvi_2152	0.35	-1.2
2,558,777	-		Echvi_2152	0.35	-0.2
2,558,777	-		Echvi_2152	0.35	-2.6
2,558,804	+		Echvi_2152	0.37	-0.4
2,558,804	+		Echvi_2152	0.37	-2.0
2,558,804	+		Echvi_2152	0.37	-2.6
2,558,888	+		Echvi_2152	0.41	-0.2
2,558,888	+		Echvi_2152	0.41	-1.3
2,558,912	+		Echvi_2152	0.42	-0.3
2,558,914	+		Echvi_2152	0.42	-3.1
2,558,915	-		Echvi_2152	0.42	-1.6
2,558,978	+		Echvi_2152	0.45	-1.5
2,559,067	-		Echvi_2152	0.50	+0.0
2,559,069	-		Echvi_2152	0.50	+1.1
2,559,071	+		Echvi_2152	0.50	+0.3
2,559,071	+		Echvi_2152	0.50	-2.6
2,559,071	+		Echvi_2152	0.50	-0.6
2,559,071	+		Echvi_2152	0.50	-0.3
2,559,080	+		Echvi_2152	0.51	-1.3
2,559,080	+		Echvi_2152	0.51	-1.0
2,559,080	+		Echvi_2152	0.51	-2.9
2,559,081	-		Echvi_2152	0.51	+0.2
2,559,129	+		Echvi_2152	0.53	+0.2
2,559,129	+		Echvi_2152	0.53	-0.0
2,559,152	-		Echvi_2152	0.54	-1.1
2,559,389	+		Echvi_2152	0.66	+0.1
2,559,390	-		Echvi_2152	0.66	-1.1
2,559,390	-		Echvi_2152	0.66	-0.4
2,559,390	-		Echvi_2152	0.66	-0.6
2,559,400	-		Echvi_2152	0.67	-0.4
2,559,409	+		Echvi_2152	0.67	-1.9
2,559,410	-		Echvi_2152	0.67	+1.1
2,559,410	-		Echvi_2152	0.67	+0.7
2,559,445	+		Echvi_2152	0.69	-2.0
2,559,519	-		Echvi_2152	0.73	-1.6
2,559,519	-		Echvi_2152	0.73	-1.0
2,559,523	+		Echvi_2152	0.73	+0.7
2,559,523	+		Echvi_2152	0.73	-1.0
2,559,542	+		Echvi_2152	0.74	-0.3
2,559,556	-		Echvi_2152	0.75	+0.7
2,559,573	-		Echvi_2152	0.75	-0.0
2,559,599	+		Echvi_2152	0.77	-2.2
2,559,600	-		Echvi_2152	0.77	+2.0
2,559,601	+		Echvi_2152	0.77	-0.4
2,559,601	+		Echvi_2152	0.77	-1.5
2,559,601	+		Echvi_2152	0.77	-0.0
2,559,601	+		Echvi_2152	0.77	-1.2
2,559,602	-		Echvi_2152	0.77	-0.1
2,559,602	-		Echvi_2152	0.77	-0.2
2,559,632	-		Echvi_2152	0.78	-0.6
2,559,722	-		Echvi_2152	0.83	-1.2
2,559,722	-		Echvi_2152	0.83	-0.8
2,559,722	-		Echvi_2152	0.83	+0.2
2,559,725	+		Echvi_2152	0.83	-2.7
2,559,726	-		Echvi_2152	0.83	-0.3
2,559,726	-		Echvi_2152	0.83	-0.1
2,559,729	-		Echvi_2152	0.83	-1.5
2,559,778	+		Echvi_2152	0.86	-0.8
2,559,779	-		Echvi_2152	0.86	+0.4
2,559,808	+		Echvi_2152	0.87	+0.8
2,559,809	-		Echvi_2152	0.87	-0.4
2,559,836	-		Echvi_2152	0.89	-0.9
2,559,861	-				+0.4
2,559,861	-				+0.1
2,559,861	-				-1.1
2,559,862	+				-1.3
2,559,905	+				-1.8
2,559,906	-				+0.4
2,559,906	-				+0.5
2,559,906	-				-0.1
2,559,906	-				+1.5
2,559,906	-				-0.3
2,559,907	+				-0.9
2,559,907	+				-1.9
2,559,907	+				-0.6
2,559,907	+				-1.1
2,559,907	+				-0.3
2,559,939	+				-2.0
2,559,939	+				-2.0
2,559,939	+				-0.7
2,559,953	+				-2.6
2,560,001	-				+0.3
2,560,030	+				-1.1
2,560,053	-				-0.2
2,560,079	-				+0.4
2,560,079	-				+0.0
2,560,092	-				+0.3
2,560,110	-				-0.5
2,560,113	-				+1.4
2,560,159	+				+0.4
2,560,182	-				-0.1
2,560,250	-				+0.2
2,560,257	+				-1.3
2,560,281	+				-0.6
2,560,281	+				-0.2
2,560,281	+				-1.1
2,560,281	+				-0.9
2,560,282	-				+0.7
2,560,282	-				-1.7
2,560,292	+				+0.6
2,560,293	-				+0.0
2,560,299	+				+0.2
2,560,300	-				+0.4
2,560,364	+		Echvi_2153	0.11	+1.9
2,560,377	+		Echvi_2153	0.12	+1.0
2,560,378	-		Echvi_2153	0.12	+0.5
2,560,378	-		Echvi_2153	0.12	-0.1
2,560,378	-		Echvi_2153	0.12	+1.1
2,560,380	+		Echvi_2153	0.12	-0.1
2,560,380	+		Echvi_2153	0.12	+0.7
2,560,380	+		Echvi_2153	0.12	-1.3
2,560,380	+		Echvi_2153	0.12	+0.0
2,560,380	+		Echvi_2153	0.12	+0.4
2,560,381	-		Echvi_2153	0.12	-0.6
2,560,381	-		Echvi_2153	0.12	-0.1
2,560,381	-		Echvi_2153	0.12	+3.3
2,560,381	-		Echvi_2153	0.12	+0.1
2,560,381	-		Echvi_2153	0.12	+0.9
2,560,381	-		Echvi_2153	0.12	+0.9
2,560,381	-		Echvi_2153	0.12	+1.6
2,560,381	-		Echvi_2153	0.12	+1.5
2,560,401	+		Echvi_2153	0.13	+0.7
2,560,422	+		Echvi_2153	0.14	+0.1
2,560,423	-		Echvi_2153	0.14	-0.6
2,560,423	-		Echvi_2153	0.14	-0.2
2,560,423	-		Echvi_2153	0.14	+1.9
2,560,423	-		Echvi_2153	0.14	-0.7
2,560,432	+		Echvi_2153	0.14	-0.5
2,560,432	+		Echvi_2153	0.14	+1.0
2,560,433	-		Echvi_2153	0.14	+0.1
2,560,433	-		Echvi_2153	0.14	-0.0
2,560,433	-		Echvi_2153	0.14	-2.0
2,560,460	+		Echvi_2153	0.15	-0.3
2,560,502	+		Echvi_2153	0.17	-0.7
2,560,503	-		Echvi_2153	0.17	+2.5
2,560,553	-		Echvi_2153	0.19	-0.8
2,560,553	-		Echvi_2153	0.19	-0.6
2,560,574	+		Echvi_2153	0.20	-0.3
2,560,578	+		Echvi_2153	0.21	-0.2
2,560,578	+		Echvi_2153	0.21	+0.1
2,560,611	+		Echvi_2153	0.22	-0.2
2,560,612	-		Echvi_2153	0.22	-1.4
2,560,633	-		Echvi_2153	0.23	+0.1
2,560,633	-		Echvi_2153	0.23	+1.0
2,560,633	-		Echvi_2153	0.23	+0.8
2,560,646	-		Echvi_2153	0.23	+1.4
2,560,646	-		Echvi_2153	0.23	-1.0
2,560,646	-		Echvi_2153	0.23	+2.5
2,560,648	+		Echvi_2153	0.24	-0.6
2,560,648	+		Echvi_2153	0.24	-0.5
2,560,648	+		Echvi_2153	0.24	-0.9
2,560,677	+		Echvi_2153	0.25	+0.2
2,560,698	+		Echvi_2153	0.26	-0.2
2,560,699	-		Echvi_2153	0.26	+0.1
2,560,780	+		Echvi_2153	0.29	-0.6
2,560,801	+		Echvi_2153	0.30	+0.4
2,560,815	+		Echvi_2153	0.31	+0.4
2,560,816	-		Echvi_2153	0.31	+0.5
2,560,868	-		Echvi_2153	0.33	-0.3
2,560,936	+		Echvi_2153	0.36	-1.6
2,560,937	-		Echvi_2153	0.36	-1.9
2,560,937	-		Echvi_2153	0.36	+0.5
2,560,956	+		Echvi_2153	0.37	-1.2
2,560,956	+		Echvi_2153	0.37	+0.9
2,560,992	-		Echvi_2153	0.38	+1.1
2,561,035	-		Echvi_2153	0.40	+0.0
2,561,035	-		Echvi_2153	0.40	+0.1
2,561,056	+		Echvi_2153	0.41	+1.7
2,561,057	-		Echvi_2153	0.41	+0.2