Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2151

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,556,118	-		Echvi_2150	0.90	-2.4
2,556,159	+				-1.1
2,556,160	-				+1.1
2,556,160	-				-0.6
2,556,163	+				-1.0
2,556,164	-				-0.6
2,556,164	-				-1.3
2,556,164	-				-1.6
2,556,166	-				+0.7
2,556,209	+				-3.0
2,556,332	+				-0.6
2,556,444	+				-0.8
2,556,473	+				+0.5
2,556,474	-				-2.8
2,556,474	-				-0.5
2,556,479	+				-1.0
2,556,501	-				-0.0
2,556,518	-				-0.6
2,556,520	-				-0.9
2,556,525	+				-1.1
2,556,526	-				+0.0
2,556,526	-				+0.7
2,556,527	+				-1.4
2,556,527	+				+0.7
2,556,528	-				-2.5
2,556,530	+				+0.1
2,556,537	+				-2.5
2,556,547	-				+0.1
2,556,557	+				-0.1
2,556,558	-				-1.4
2,556,558	-				+0.2
2,556,569	+				-3.1
2,556,577	+				-1.1
2,556,577	+				+1.4
2,556,598	+				-1.5
2,556,621	+				+0.6
2,556,637	+				-0.5
2,556,637	+				-0.8
2,556,758	+				-0.9
2,556,759	-				-2.4
2,556,795	+				-1.2
2,556,824	+				-2.8
2,556,831	+				-0.5
2,556,832	-				-0.5
2,556,841	-				-0.7
2,556,876	+				-1.3
2,556,876	+				-0.5
2,556,957	+				-0.6
2,556,973	-				+0.9
2,556,973	-				-2.3
2,557,008	+				-1.5
2,557,012	+				+0.4
2,557,012	+				-1.2
2,557,013	-				-1.3
2,557,015	+				-1.5
2,557,015	+				-0.5
2,557,015	+				-2.2
2,557,019	-				-0.3
2,557,050	+				+0.1
2,557,050	+				-2.1
2,557,072	+				-3.7
2,557,072	+				-0.6
2,557,076	+				-0.9
2,557,085	+				-0.4
2,557,115	+				-1.0
2,557,191	-				+0.5
2,557,191	-				-0.8
2,557,192	+				+0.7
2,557,192	+				+2.3
2,557,192	+				-0.6
2,557,193	-				-0.3
2,557,193	-				+0.2
2,557,198	+		Echvi_2151	0.10	-2.1
2,557,223	+		Echvi_2151	0.13	-0.8
2,557,260	-		Echvi_2151	0.17	-0.2
2,557,360	+		Echvi_2151	0.27	-1.4
2,557,361	-		Echvi_2151	0.27	+0.4
2,557,361	-		Echvi_2151	0.27	-0.2
2,557,361	-		Echvi_2151	0.27	-0.5
2,557,361	-		Echvi_2151	0.27	-0.2
2,557,361	-		Echvi_2151	0.27	-0.8
2,557,369	-		Echvi_2151	0.28	-1.6
2,557,412	-		Echvi_2151	0.32	-0.0
2,557,445	+		Echvi_2151	0.36	+0.7
2,557,445	+		Echvi_2151	0.36	-0.6
2,557,499	-		Echvi_2151	0.41	+1.1
2,557,499	-		Echvi_2151	0.41	+0.9
2,557,504	-		Echvi_2151	0.42	-0.7
2,557,587	-		Echvi_2151	0.50	-1.8
2,557,589	+		Echvi_2151	0.50	-1.7
2,557,591	+		Echvi_2151	0.51	-1.3
2,557,592	-		Echvi_2151	0.51	-1.9
2,557,597	+		Echvi_2151	0.51	-0.6
2,557,602	+		Echvi_2151	0.52	-1.2
2,557,665	+		Echvi_2151	0.58	-0.6
2,557,685	-		Echvi_2151	0.60	+0.8
2,557,692	-		Echvi_2151	0.61	+0.3
2,557,720	-		Echvi_2151	0.64	-0.2
2,557,724	+		Echvi_2151	0.64	+0.7
2,557,724	+		Echvi_2151	0.64	-1.6
2,557,724	+		Echvi_2151	0.64	+0.1
2,557,724	+		Echvi_2151	0.64	-1.5
2,557,724	+		Echvi_2151	0.64	-0.9
2,557,725	-		Echvi_2151	0.64	-1.5
2,557,725	-		Echvi_2151	0.64	-0.2
2,557,754	+		Echvi_2151	0.67	-2.0
2,557,804	-		Echvi_2151	0.73	-1.5
2,557,804	-		Echvi_2151	0.73	-0.9
2,557,923	-		Echvi_2151	0.85	-0.3
2,557,949	+		Echvi_2151	0.88	+0.1
2,557,950	-		Echvi_2151	0.88	+0.1
2,557,955	+		Echvi_2151	0.88	+0.4
2,557,964	-		Echvi_2151	0.89	+1.2
2,557,964	-		Echvi_2151	0.89	-0.0
2,557,964	-		Echvi_2151	0.89	-1.4
2,558,018	+				+0.0
2,558,019	-				+0.5
2,558,046	+				-0.7
2,558,075	+				-1.3
2,558,075	+				-1.5
2,558,075	+				-0.4
2,558,076	-				-0.8
2,558,076	-				-0.3
2,558,076	-				+0.1
2,558,077	+				-1.1
2,558,078	-				-0.5
2,558,092	+				-0.9
2,558,092	+				+0.7
2,558,096	+				-0.6
2,558,096	+				-2.9
2,558,096	+				-0.2
2,558,096	+				-1.9
2,558,097	-				+0.3
2,558,097	-				-0.0
2,558,097	-				+1.2
2,558,097	-				+0.8
2,558,099	+				-1.3
2,558,099	+				-1.4
2,558,100	-				+1.5
2,558,100	-				-0.1
2,558,100	-				-0.3
2,558,198	+				+0.1
2,558,199	-				-1.3
2,558,219	+				-3.9
2,558,220	-				+0.1
2,558,221	+				-0.3
2,558,221	+				+0.8
2,558,221	+				+0.1
2,558,221	+				-0.3
2,558,222	-				-0.0
2,558,222	-				-0.1
2,558,222	-				+0.4
2,558,222	-				-0.3
2,558,222	-				-0.1
2,558,226	+				-1.8
2,558,227	-				-1.5
2,558,279	+		Echvi_2152	0.10	-0.3
2,558,429	+		Echvi_2152	0.18	+1.0
2,558,430	-		Echvi_2152	0.18	+1.4
2,558,430	-		Echvi_2152	0.18	-0.2
2,558,471	-		Echvi_2152	0.20	-0.2
2,558,529	+		Echvi_2152	0.23	-0.9
2,558,529	+		Echvi_2152	0.23	-2.8
2,558,582	+		Echvi_2152	0.25	-1.6
2,558,583	-		Echvi_2152	0.25	-0.3
2,558,583	-		Echvi_2152	0.25	-0.1
2,558,583	-		Echvi_2152	0.25	+1.5
2,558,583	-		Echvi_2152	0.25	+0.2
2,558,583	-		Echvi_2152	0.25	-0.3
2,558,587	-		Echvi_2152	0.26	-0.6
2,558,587	-		Echvi_2152	0.26	+0.1
2,558,657	+		Echvi_2152	0.29	-1.1
2,558,658	-		Echvi_2152	0.29	-0.6
2,558,677	+		Echvi_2152	0.30	-1.6
2,558,677	+		Echvi_2152	0.30	-0.4
2,558,681	+		Echvi_2152	0.30	-0.2
2,558,682	-		Echvi_2152	0.30	+0.8
2,558,706	+		Echvi_2152	0.32	-3.6
2,558,712	+		Echvi_2152	0.32	-0.3
2,558,742	-		Echvi_2152	0.33	+0.3
2,558,749	-		Echvi_2152	0.34	+0.2
2,558,752	+		Echvi_2152	0.34	-2.2
2,558,752	+		Echvi_2152	0.34	-0.7
2,558,753	-		Echvi_2152	0.34	+0.7
2,558,753	-		Echvi_2152	0.34	+0.3
2,558,774	+		Echvi_2152	0.35	-1.2
2,558,777	-		Echvi_2152	0.35	-0.2
2,558,777	-		Echvi_2152	0.35	-2.6
2,558,804	+		Echvi_2152	0.37	-0.4
2,558,804	+		Echvi_2152	0.37	-2.0
2,558,804	+		Echvi_2152	0.37	-2.6
2,558,888	+		Echvi_2152	0.41	-0.2
2,558,888	+		Echvi_2152	0.41	-1.3
2,558,912	+		Echvi_2152	0.42	-0.3
2,558,914	+		Echvi_2152	0.42	-3.1
2,558,915	-		Echvi_2152	0.42	-1.6
2,558,978	+		Echvi_2152	0.45	-1.5
2,559,067	-		Echvi_2152	0.50	+0.0