Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2084

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,456,801	+		Echvi_2083	0.35	+1.7
2,456,802	-		Echvi_2083	0.35	-1.1
2,456,828	-		Echvi_2083	0.37	+0.3
2,456,828	-		Echvi_2083	0.37	+0.0
2,456,843	+		Echvi_2083	0.38	+1.1
2,456,843	+		Echvi_2083	0.38	-1.7
2,456,843	+		Echvi_2083	0.38	-0.4
2,456,843	+		Echvi_2083	0.38	-0.8
2,456,848	+		Echvi_2083	0.39	+0.3
2,456,848	+		Echvi_2083	0.39	+1.3
2,456,848	+		Echvi_2083	0.39	+0.2
2,456,848	+		Echvi_2083	0.39	+0.4
2,456,848	+		Echvi_2083	0.39	-1.1
2,456,849	-		Echvi_2083	0.39	-0.5
2,456,849	-		Echvi_2083	0.39	-0.2
2,456,857	-		Echvi_2083	0.39	+0.0
2,456,936	-		Echvi_2083	0.45	+1.9
2,456,977	-		Echvi_2083	0.49	+0.4
2,457,009	-		Echvi_2083	0.51	-0.5
2,457,194	+		Echvi_2083	0.65	-0.4
2,457,195	-		Echvi_2083	0.65	+0.8
2,457,195	-		Echvi_2083	0.65	+0.7
2,457,197	-		Echvi_2083	0.66	+0.5
2,457,197	-		Echvi_2083	0.66	-2.0
2,457,197	-		Echvi_2083	0.66	-0.3
2,457,197	-		Echvi_2083	0.66	-0.3
2,457,197	-		Echvi_2083	0.66	+0.3
2,457,309	+		Echvi_2083	0.74	-1.8
2,457,326	+		Echvi_2083	0.76	-0.2
2,457,335	+		Echvi_2083	0.76	+0.4
2,457,335	+		Echvi_2083	0.76	+1.7
2,457,350	+		Echvi_2083	0.77	-0.0
2,457,351	-		Echvi_2083	0.77	-0.5
2,457,405	+		Echvi_2083	0.82	+2.6
2,457,406	-		Echvi_2083	0.82	+0.1
2,457,406	-		Echvi_2083	0.82	-0.9
2,457,517	+				-0.9
2,457,517	+				-0.5
2,457,518	-				+0.7
2,457,518	-				-0.7
2,457,588	+				-0.1
2,457,588	+				+1.2
2,457,588	+				+0.7
2,457,589	-				+0.5
2,457,706	-				-0.1
2,457,706	-				+0.5
2,457,731	+				-2.0
2,457,805	-				-1.0
2,457,805	-				-1.1
2,457,866	+				-2.3
2,457,866	+				+0.0
2,457,867	-				+0.2
2,457,977	+				-1.9
2,457,978	-				-2.8
2,457,986	-				-2.1
2,458,035	+				-0.6
2,458,037	+				-3.7
2,458,077	-				-1.9
2,458,077	-				-3.7
2,458,102	-				+1.7
2,458,179	+				-4.5
2,458,179	+				-2.5
2,458,180	-				-2.5
2,458,181	+				-0.3
2,458,182	-				-0.2
2,458,192	+				-3.0
2,458,193	-				-3.9
2,458,193	-				-3.6
2,458,193	-				-0.9
2,458,282	+		Echvi_2084	0.12	-1.0
2,458,382	-		Echvi_2084	0.14	-2.2
2,458,550	+		Echvi_2084	0.17	-1.6
2,458,550	+		Echvi_2084	0.17	-2.3
2,458,622	+		Echvi_2084	0.19	-1.9
2,458,622	+		Echvi_2084	0.19	-2.0
2,458,623	-		Echvi_2084	0.19	-0.3
2,458,653	-		Echvi_2084	0.20	-1.3
2,458,718	+		Echvi_2084	0.21	-1.3
2,458,754	+		Echvi_2084	0.22	-2.1
2,458,755	-		Echvi_2084	0.22	-3.1
2,458,786	-		Echvi_2084	0.23	-4.5
2,458,800	+		Echvi_2084	0.23	-5.2
2,458,801	-		Echvi_2084	0.23	-3.1
2,458,842	+		Echvi_2084	0.24	-1.1
2,458,842	+		Echvi_2084	0.24	-2.0
2,458,864	-		Echvi_2084	0.24	+0.5
2,458,864	-		Echvi_2084	0.24	-3.7
2,458,866	-		Echvi_2084	0.24	-1.1
2,458,941	+		Echvi_2084	0.26	-0.9
2,458,983	+		Echvi_2084	0.27	-2.0
2,458,983	+		Echvi_2084	0.27	-2.1
2,458,984	-		Echvi_2084	0.27	-2.1
2,459,127	-		Echvi_2084	0.30	-2.6
2,459,158	+		Echvi_2084	0.30	-3.0
2,459,159	-		Echvi_2084	0.30	-2.5
2,459,159	-		Echvi_2084	0.30	-3.1
2,459,181	+		Echvi_2084	0.31	-3.2
2,459,247	+		Echvi_2084	0.32	-0.6
2,459,248	-		Echvi_2084	0.32	-2.6
2,459,248	-		Echvi_2084	0.32	-1.8
2,459,248	-		Echvi_2084	0.32	-1.1
2,459,271	+		Echvi_2084	0.33	-4.1
2,459,342	+		Echvi_2084	0.34	-2.2
2,459,342	+		Echvi_2084	0.34	-1.1
2,459,343	-		Echvi_2084	0.34	-4.1
2,459,387	-		Echvi_2084	0.35	-1.5
2,459,402	-		Echvi_2084	0.36	-3.2
2,459,402	-		Echvi_2084	0.36	-1.0
2,459,536	-		Echvi_2084	0.38	-1.6
2,459,539	-		Echvi_2084	0.39	-2.5
2,459,542	-		Echvi_2084	0.39	-3.4
2,459,542	-		Echvi_2084	0.39	-2.1
2,459,542	-		Echvi_2084	0.39	-3.7
2,459,560	-		Echvi_2084	0.39	-1.8
2,459,652	+		Echvi_2084	0.41	-3.1
2,459,678	-		Echvi_2084	0.42	-4.1
2,459,772	+		Echvi_2084	0.44	-2.0
2,459,842	+				+2.7
2,459,885	-		Echvi_2084	0.46	-2.7
2,459,910	+		Echvi_2084	0.46	-0.1
2,459,940	-		Echvi_2084	0.47	-3.7
2,460,026	+		Echvi_2084	0.49	+1.7
2,460,026	+		Echvi_2084	0.49	-1.3
2,460,040	+		Echvi_2084	0.49	-1.1
2,460,041	-		Echvi_2084	0.49	-2.8
2,460,041	-		Echvi_2084	0.49	-1.3
2,460,108	+		Echvi_2084	0.51	+0.9
2,460,150	+		Echvi_2084	0.52	-1.5
2,460,150	+		Echvi_2084	0.52	-3.5
2,460,151	-		Echvi_2084	0.52	-3.2
2,460,151	-		Echvi_2084	0.52	-2.4
2,460,152	+		Echvi_2084	0.52	-4.7
2,460,152	+				+1.7
2,460,152	+		Echvi_2084	0.52	-0.1
2,460,153	-		Echvi_2084	0.52	-4.6
2,460,153	-		Echvi_2084	0.52	-0.3
2,460,153	-		Echvi_2084	0.52	-2.7
2,460,153	-		Echvi_2084	0.52	-0.8
2,460,153	-		Echvi_2084	0.52	-4.2
2,460,167	-		Echvi_2084	0.52	-2.6
2,460,167	-		Echvi_2084	0.52	-0.9
2,460,236	+		Echvi_2084	0.53	+1.1
2,460,261	-		Echvi_2084	0.54	-1.8
2,460,267	+		Echvi_2084	0.54	-2.7
2,460,267	+		Echvi_2084	0.54	-1.6
2,460,329	+		Echvi_2084	0.55	-2.4
2,460,329	+		Echvi_2084	0.55	-3.3
2,460,329	+		Echvi_2084	0.55	-2.5
2,460,329	+		Echvi_2084	0.55	-0.4
2,460,329	+		Echvi_2084	0.55	-1.2
2,460,329	+		Echvi_2084	0.55	-2.3
2,460,329	+		Echvi_2084	0.55	-0.2
2,460,329	+		Echvi_2084	0.55	-2.8
2,460,330	-		Echvi_2084	0.55	-1.9
2,460,330	-		Echvi_2084	0.55	-0.7
2,460,330	-		Echvi_2084	0.55	+1.7
2,460,367	-		Echvi_2084	0.56	-3.4
2,460,396	+		Echvi_2084	0.57	-1.9
2,460,399	-		Echvi_2084	0.57	-3.7
2,460,399	-		Echvi_2084	0.57	-1.9
2,460,399	-		Echvi_2084	0.57	-2.5
2,460,399	-		Echvi_2084	0.57	-1.7
2,460,464	+		Echvi_2084	0.58	-1.5
2,460,465	-		Echvi_2084	0.58	-3.3
2,460,523	+		Echvi_2084	0.60	-2.7
2,460,523	+		Echvi_2084	0.60	-2.8
2,460,525	+		Echvi_2084	0.60	-2.4
2,460,525	+		Echvi_2084	0.60	+0.1
2,460,526	-		Echvi_2084	0.60	-0.3
2,460,605	-		Echvi_2084	0.61	-4.2
2,460,605	-		Echvi_2084	0.61	-0.8
2,460,637	+		Echvi_2084	0.62	-1.7
2,460,637	+		Echvi_2084	0.62	-3.6
2,460,637	+		Echvi_2084	0.62	-1.4
2,460,638	-		Echvi_2084	0.62	-1.5
2,460,719	+		Echvi_2084	0.64	-4.3
2,460,729	+		Echvi_2084	0.64	-2.7
2,460,730	-		Echvi_2084	0.64	-2.3
2,460,740	-		Echvi_2084	0.64	-1.9
2,460,897	+		Echvi_2084	0.67	-1.0
2,460,908	+		Echvi_2084	0.68	-1.8
2,460,909	-		Echvi_2084	0.68	-2.0
2,460,909	-		Echvi_2084	0.68	-2.6
2,460,909	-		Echvi_2084	0.68	-2.1
2,460,933	+		Echvi_2084	0.68	-2.7
2,460,934	-		Echvi_2084	0.68	-0.9
2,460,934	-		Echvi_2084	0.68	-4.1
2,460,970	+		Echvi_2084	0.69	-2.9
2,461,019	+		Echvi_2084	0.70	-3.2
2,461,054	+		Echvi_2084	0.71	-2.7
2,461,054	+		Echvi_2084	0.71	-2.1
2,461,069	+		Echvi_2084	0.71	-0.6
2,461,070	-		Echvi_2084	0.71	-2.2
2,461,079	+		Echvi_2084	0.71	-4.5
2,461,079	+		Echvi_2084	0.71	+0.7
2,461,080	-		Echvi_2084	0.71	-3.2
2,461,082	+		Echvi_2084	0.71	-3.7
2,461,083	-		Echvi_2084	0.71	-3.2
2,461,083	-		Echvi_2084	0.71	-2.6
2,461,083	-		Echvi_2084	0.71	+1.7
2,461,083	-		Echvi_2084	0.71	-2.8
2,461,083	-		Echvi_2084	0.71	-0.1
2,461,136	-		Echvi_2084	0.73	-3.0
2,461,136	-		Echvi_2084	0.73	-2.8
2,461,178	+		Echvi_2084	0.73	-3.1
2,461,250	+		Echvi_2084	0.75	-1.7
2,461,251	-		Echvi_2084	0.75	-2.6
2,461,308	+		Echvi_2084	0.76	-1.7
2,461,309	-		Echvi_2084	0.76	-1.2
2,461,461	+		Echvi_2084	0.80	-2.1
2,461,461	+		Echvi_2084	0.80	-5.2
2,461,461	+		Echvi_2084	0.80	-2.1
2,461,461	+		Echvi_2084	0.80	-1.1
2,461,462	-		Echvi_2084	0.80	-3.3
2,461,462	-		Echvi_2084	0.80	-1.1
2,461,462	-		Echvi_2084	0.80	-1.9
2,461,462	-		Echvi_2084	0.80	-1.6
2,461,462	-		Echvi_2084	0.80	-2.6
2,461,477	-		Echvi_2084	0.80	-1.6
2,461,526	-		Echvi_2084	0.81	-4.2
2,461,547	-		Echvi_2084	0.81	-2.0
2,461,547	-		Echvi_2084	0.81	-2.8
2,461,565	+		Echvi_2084	0.82	-2.9
2,461,566	-		Echvi_2084	0.82	-0.1
2,461,672	+		Echvi_2084	0.84	-1.6
2,461,672	+		Echvi_2084	0.84	-1.4
2,461,705	+		Echvi_2084	0.85	-2.8
2,461,705	+		Echvi_2084	0.85	-2.6
2,461,705	+		Echvi_2084	0.85	-2.3
2,461,705	+		Echvi_2084	0.85	-3.6
2,461,705	+		Echvi_2084	0.85	-4.3
2,461,714	+		Echvi_2084	0.85	-2.5
2,461,715	-		Echvi_2084	0.85	-0.6
2,461,766	-		Echvi_2084	0.86	-3.1
2,461,794	-		Echvi_2084	0.87	-0.4
2,461,866	+		Echvi_2084	0.88	-2.0
2,461,930	+		Echvi_2084	0.90	-1.6
2,461,930	+		Echvi_2084	0.90	-1.8
2,462,069	+				-0.3
2,462,069	+				-0.6
2,462,069	+				-4.4
2,462,091	+				-4.3
2,462,092	-				-2.4
2,462,197	-				-2.7
2,462,299	+				+0.7
2,462,329	+				-1.9
2,462,330	-				-1.5
2,462,330	-				-0.5
2,462,331	+				-1.9
2,462,334	+				-3.9
2,462,335	-				-0.9