Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1902

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,231,261	+		Echvi_1901	0.67	-0.6
2,231,265	+		Echvi_1901	0.67	+0.4
2,231,266	-		Echvi_1901	0.67	-2.0
2,231,266	-		Echvi_1901	0.67	-0.3
2,231,272	-		Echvi_1901	0.68	-0.0
2,231,464	-		Echvi_1901	0.75	-1.1
2,231,464	-		Echvi_1901	0.75	-0.7
2,231,545	-		Echvi_1901	0.79	-1.1
2,231,550	+		Echvi_1901	0.79	-0.2
2,231,617	+		Echvi_1901	0.81	+0.2
2,231,707	+		Echvi_1901	0.85	+0.4
2,231,708	-		Echvi_1901	0.85	-0.8
2,231,734	-		Echvi_1901	0.86	-0.4
2,231,776	-		Echvi_1901	0.88	+0.6
2,231,776	-		Echvi_1901	0.88	+1.4
2,231,780	+		Echvi_1901	0.88	-0.9
2,231,781	-		Echvi_1901	0.88	-1.3
2,231,902	+				-0.6
2,231,903	-				-3.0
2,231,903	-				+0.9
2,231,938	+				-0.9
2,231,938	+				-0.9
2,231,938	+				-1.6
2,231,938	+				-1.5
2,231,938	+				+0.4
2,231,939	-				-0.7
2,231,954	+				-0.7
2,232,061	+				-0.3
2,232,064	+				-2.1
2,232,067	+				-2.3
2,232,079	-				-1.7
2,232,079	-				-1.4
2,232,139	-				-1.6
2,232,148	-				+4.0
2,232,153	-				-2.7
2,232,230	+				-0.1
2,232,372	+		Echvi_1902	0.18	-0.5
2,232,373	-		Echvi_1902	0.18	-2.1
2,232,376	+		Echvi_1902	0.19	+0.5
2,232,426	+		Echvi_1902	0.25	-2.2
2,232,427	-		Echvi_1902	0.26	+0.1
2,232,466	-		Echvi_1902	0.31	-1.6
2,232,497	+		Echvi_1902	0.35	+0.4
2,232,513	+		Echvi_1902	0.37	+1.7
2,232,514	-		Echvi_1902	0.37	+0.2
2,232,569	+		Echvi_1902	0.44	+0.6
2,232,576	+		Echvi_1902	0.45	-0.6
2,232,576	+		Echvi_1902	0.45	+1.7
2,232,577	-		Echvi_1902	0.45	-3.0
2,232,577	-		Echvi_1902	0.45	-0.7
2,232,577	-		Echvi_1902	0.45	+0.7
2,232,577	-		Echvi_1902	0.45	-1.3
2,232,577	-		Echvi_1902	0.45	+2.1
2,232,623	+		Echvi_1902	0.51	+0.6
2,232,624	-		Echvi_1902	0.51	-1.3
2,232,625	+		Echvi_1902	0.51	+0.7
2,232,632	+		Echvi_1902	0.52	-1.2
2,232,633	-		Echvi_1902	0.52	-1.9
2,232,679	+		Echvi_1902	0.58	+0.1
2,232,679	+		Echvi_1902	0.58	+0.6
2,232,680	-		Echvi_1902	0.58	-1.1
2,232,680	-		Echvi_1902	0.58	+0.1
2,232,680	-		Echvi_1902	0.58	-0.8
2,232,775	+		Echvi_1902	0.71	+0.4
2,232,776	-		Echvi_1902	0.71	+0.4
2,232,782	-		Echvi_1902	0.72	-1.8
2,232,968	+				-0.7
2,232,968	+				+0.4
2,232,968	+				-0.3
2,232,969	-				+0.1
2,232,997	-				+0.8
2,233,005	-				-0.6
2,233,005	-				+0.7
2,233,005	-				-0.1
2,233,039	+				-0.0
2,233,039	+				+0.2
2,233,039	+				-1.7
2,233,040	-				-0.5
2,233,040	-				+0.4
2,233,040	-				-1.7
2,233,040	-				+0.7
2,233,047	+				+2.7
2,233,048	-				-1.2
2,233,050	+				-1.3
2,233,051	-				-0.3
2,233,051	-				-1.4
2,233,054	+				+0.6
2,233,054	+				-1.1
2,233,064	+				-0.3
2,233,064	+				-3.3
2,233,151	+				+0.4
2,233,164	+				-0.6
2,233,165	-				+1.4
2,233,211	-				+0.2
2,233,241	+				-0.1
2,233,242	-				-0.8
2,233,293	+				-0.1
2,233,306	+				+1.3
2,233,307	-				-1.3
2,233,314	+		Echvi_1903	0.10	-1.5
2,233,316	+		Echvi_1903	0.10	-1.1
2,233,316	+		Echvi_1903	0.10	+0.1
2,233,316	+		Echvi_1903	0.10	-2.2
2,233,316	+		Echvi_1903	0.10	-0.2
2,233,317	-		Echvi_1903	0.10	+0.7
2,233,317	-		Echvi_1903	0.10	-0.8
2,233,473	+		Echvi_1903	0.25	-0.2
2,233,473	+		Echvi_1903	0.25	+0.7
2,233,474	-		Echvi_1903	0.25	-1.6
2,233,474	-		Echvi_1903	0.25	+0.4
2,233,554	+		Echvi_1903	0.32	-1.5
2,233,555	-		Echvi_1903	0.32	-1.8
2,233,560	+		Echvi_1903	0.33	+1.6
2,233,561	-		Echvi_1903	0.33	+1.0
2,233,581	+		Echvi_1903	0.35	+0.5
2,233,581	+		Echvi_1903	0.35	-1.1
2,233,581	+		Echvi_1903	0.35	-1.1
2,233,581	+		Echvi_1903	0.35	+0.1
2,233,582	-		Echvi_1903	0.35	-0.2
2,233,607	+		Echvi_1903	0.37	-0.2
2,233,672	+		Echvi_1903	0.43	+0.7
2,233,676	+		Echvi_1903	0.43	+3.0
2,233,676	+		Echvi_1903	0.43	-0.5
2,233,677	-		Echvi_1903	0.43	+0.2
2,233,677	-		Echvi_1903	0.43	-0.6
2,233,677	-		Echvi_1903	0.43	+1.7
2,233,704	-		Echvi_1903	0.46	+0.2
2,233,769	-		Echvi_1903	0.52	+0.7
2,233,821	-		Echvi_1903	0.57	-0.7
2,233,865	+		Echvi_1903	0.61	+0.0
2,233,865	+		Echvi_1903	0.61	+0.5
2,233,866	-		Echvi_1903	0.61	-0.9
2,233,866	-		Echvi_1903	0.61	-0.4
2,233,882	-		Echvi_1903	0.62	+0.0