Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1879

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,204,764	+		Echvi_1878	0.26	-0.3
2,204,764	+		Echvi_1878	0.26	+0.9
2,204,765	-		Echvi_1878	0.26	-0.5
2,204,765	-		Echvi_1878	0.26	-1.6
2,204,808	+		Echvi_1878	0.30	+1.3
2,204,811	+		Echvi_1878	0.31	-2.5
2,204,812	-		Echvi_1878	0.31	+0.5
2,204,812	-		Echvi_1878	0.31	-0.5
2,204,812	-		Echvi_1878	0.31	+1.2
2,204,830	+		Echvi_1878	0.32	-0.5
2,204,831	-		Echvi_1878	0.32	+0.5
2,205,016	-		Echvi_1878	0.49	+0.2
2,205,017	+		Echvi_1878	0.49	-2.4
2,205,176	+		Echvi_1878	0.63	+0.2
2,205,176	+		Echvi_1878	0.63	+0.7
2,205,177	-		Echvi_1878	0.63	+0.3
2,205,177	-		Echvi_1878	0.63	-1.2
2,205,177	-		Echvi_1878	0.63	+0.9
2,205,177	-		Echvi_1878	0.63	-1.5
2,205,242	-		Echvi_1878	0.69	+1.0
2,205,305	+		Echvi_1878	0.74	-0.2
2,205,306	-		Echvi_1878	0.75	-0.8
2,205,374	+		Echvi_1878	0.81	+1.0
2,205,375	-		Echvi_1878	0.81	-0.0
2,205,375	-		Echvi_1878	0.81	+0.2
2,205,375	-		Echvi_1878	0.81	+0.3
2,205,379	-		Echvi_1878	0.81	-0.9
2,205,453	-		Echvi_1878	0.88	+0.4
2,205,463	-		Echvi_1878	0.89	+1.2
2,205,566	-				+0.3
2,205,604	-				+0.7
2,205,620	-				+1.5
2,205,672	-				-0.1
2,205,682	+				-1.6
2,205,683	-				-0.1
2,205,737	+				+1.1
2,205,738	-				-0.5
2,205,765	+				+1.4
2,205,768	+				-1.1
2,205,769	-				-0.2
2,205,880	+				-2.2
2,205,972	-		Echvi_1879	0.15	+1.3
2,205,991	+		Echvi_1879	0.16	+0.4
2,206,013	+		Echvi_1879	0.18	-0.2
2,206,022	+		Echvi_1879	0.18	-0.1
2,206,023	-		Echvi_1879	0.18	-0.2
2,206,023	-		Echvi_1879	0.18	+0.5
2,206,104	-		Echvi_1879	0.24	+0.5
2,206,180	+		Echvi_1879	0.29	-0.2
2,206,180	+		Echvi_1879	0.29	+0.1
2,206,211	+		Echvi_1879	0.31	-0.5
2,206,245	+		Echvi_1879	0.33	-1.2
2,206,245	+		Echvi_1879	0.33	-1.3
2,206,245	+		Echvi_1879	0.33	+0.2
2,206,245	+		Echvi_1879	0.33	+0.6
2,206,245	+		Echvi_1879	0.33	-0.8
2,206,245	+		Echvi_1879	0.33	-1.3
2,206,245	+		Echvi_1879	0.33	-1.0
2,206,246	-		Echvi_1879	0.33	+2.3
2,206,246	-		Echvi_1879	0.33	+0.1
2,206,246	-		Echvi_1879	0.33	+0.8
2,206,341	+		Echvi_1879	0.40	-0.1
2,206,348	-		Echvi_1879	0.40	+0.1
2,206,386	-		Echvi_1879	0.43	+1.1
2,206,538	-		Echvi_1879	0.53	-0.6
2,206,539	+		Echvi_1879	0.53	-1.1
2,206,539	+		Echvi_1879	0.53	-2.5
2,206,539	+		Echvi_1879	0.53	+0.6
2,206,539	+		Echvi_1879	0.53	+0.9
2,206,539	+		Echvi_1879	0.53	-0.1
2,206,540	-		Echvi_1879	0.53	+1.5
2,206,540	-		Echvi_1879	0.53	-0.2
2,206,540	-		Echvi_1879	0.53	-1.7
2,206,552	-		Echvi_1879	0.54	+1.1
2,206,623	+		Echvi_1879	0.58	-0.2
2,206,624	-		Echvi_1879	0.58	+0.9
2,206,661	+		Echvi_1879	0.61	+1.0
2,206,661	+		Echvi_1879	0.61	-0.4
2,206,662	-		Echvi_1879	0.61	-1.2
2,206,662	-		Echvi_1879	0.61	-0.5
2,206,781	+		Echvi_1879	0.69	-0.5
2,206,781	+		Echvi_1879	0.69	+0.4
2,206,805	+		Echvi_1879	0.70	-0.5
2,206,824	-		Echvi_1879	0.72	+0.1
2,206,929	+		Echvi_1879	0.79	+1.0
2,206,929	+		Echvi_1879	0.79	+1.2
2,207,021	+		Echvi_1879	0.85	-1.6
2,207,036	-		Echvi_1879	0.86	-0.9
2,207,068	-		Echvi_1879	0.88	-0.1
2,207,098	+				-1.0
2,207,099	-				-0.2
2,207,260	-				-0.2
2,207,264	-				+0.5
2,207,264	-				+0.5
2,207,267	-				-1.1
2,207,267	-				-1.2
2,207,295	+				-0.6
2,207,299	-				-0.7
2,207,312	+				+0.5
2,207,312	+				-2.4
2,207,359	+				+1.6
2,207,359	+				-1.3
2,207,364	-				-0.4
2,207,366	+				-1.1
2,207,411	+				+0.8
2,207,467	+		Echvi_1880	0.10	+0.6
2,207,491	-		Echvi_1880	0.11	-1.2
2,207,629	+		Echvi_1880	0.19	+0.3
2,207,663	+		Echvi_1880	0.20	+0.2
2,207,663	+		Echvi_1880	0.20	-0.4
2,207,663	+		Echvi_1880	0.20	-0.9
2,207,663	+		Echvi_1880	0.20	+0.7
2,207,663	+				+0.1
2,207,663	+		Echvi_1880	0.20	+0.1
2,207,663	+		Echvi_1880	0.20	+0.2
2,207,663	+		Echvi_1880	0.20	-0.0
2,207,664	-		Echvi_1880	0.21	-0.6
2,207,664	-		Echvi_1880	0.21	+0.6
2,207,664	-		Echvi_1880	0.21	-0.7
2,207,664	-		Echvi_1880	0.21	+0.1
2,207,664	-		Echvi_1880	0.21	+1.7
2,207,668	-		Echvi_1880	0.21	-0.3
2,207,768	-		Echvi_1880	0.26	-3.1
2,207,782	+		Echvi_1880	0.27	+1.4
2,207,782	+		Echvi_1880	0.27	-0.5
2,207,782	+		Echvi_1880	0.27	-0.8
2,207,805	-		Echvi_1880	0.28	+1.5
2,207,805	-		Echvi_1880	0.28	+0.5
2,207,823	+		Echvi_1880	0.29	-0.4
2,207,823	+		Echvi_1880	0.29	+0.9
2,207,843	-		Echvi_1880	0.30	-0.9
2,207,852	+		Echvi_1880	0.31	+3.3
2,207,853	-		Echvi_1880	0.31	-1.6
2,208,004	+		Echvi_1880	0.39	+0.6
2,208,139	+		Echvi_1880	0.46	+0.4
2,208,204	+		Echvi_1880	0.49	+1.9
2,208,205	-		Echvi_1880	0.49	+1.0
2,208,205	-		Echvi_1880	0.49	+1.4