Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1842

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,157,046	-		Echvi_1840	0.45	+0.6
2,157,075	+		Echvi_1840	0.48	+0.1
2,157,076	-		Echvi_1840	0.48	-2.2
2,157,145	+		Echvi_1840	0.58	-2.4
2,157,145	+		Echvi_1840	0.58	+0.7
2,157,162	+		Echvi_1840	0.60	+0.1
2,157,162	+		Echvi_1840	0.60	+1.0
2,157,163	-		Echvi_1840	0.60	-1.3
2,157,231	+		Echvi_1840	0.69	-0.3
2,157,266	+		Echvi_1840	0.74	+0.1
2,157,267	-		Echvi_1840	0.74	-0.2
2,157,449	+				-0.2
2,157,452	+				-0.9
2,157,528	+				-1.1
2,157,535	+				-0.4
2,157,543	-				-0.4
2,157,667	-		Echvi_1841	0.35	-2.2
2,157,695	+		Echvi_1841	0.41	-0.8
2,157,721	+		Echvi_1841	0.47	+1.5
2,157,721	+		Echvi_1841	0.47	+2.4
2,157,721	+		Echvi_1841	0.47	+0.1
2,157,722	-		Echvi_1841	0.47	-1.5
2,157,722	-		Echvi_1841	0.47	+0.7
2,157,727	-		Echvi_1841	0.49	-2.9
2,157,772	+		Echvi_1841	0.59	-0.0
2,157,772	+		Echvi_1841	0.59	-1.2
2,157,772	+		Echvi_1841	0.59	-1.2
2,157,773	-		Echvi_1841	0.59	-0.1
2,157,773	-		Echvi_1841	0.59	-1.2
2,157,794	+		Echvi_1841	0.64	-0.9
2,157,890	+		Echvi_1841	0.87	+0.7
2,157,924	+				-1.2
2,157,954	+				-1.2
2,157,954	+				-0.4
2,157,967	-				-1.1
2,157,974	+				+0.0
2,158,155	+		Echvi_1842	0.17	-0.4
2,158,172	-		Echvi_1842	0.19	-0.6
2,158,176	+		Echvi_1842	0.19	-0.5
2,158,182	+		Echvi_1842	0.20	-2.2
2,158,204	+		Echvi_1842	0.22	-1.4
2,158,253	+		Echvi_1842	0.27	-1.8
2,158,253	+		Echvi_1842	0.27	-1.1
2,158,253	+		Echvi_1842	0.27	-1.1
2,158,253	+		Echvi_1842	0.27	-1.1
2,158,254	-		Echvi_1842	0.27	-1.5
2,158,254	-		Echvi_1842	0.27	-3.1
2,158,254	-		Echvi_1842	0.27	-0.9
2,158,344	-		Echvi_1842	0.35	-0.3
2,158,361	-		Echvi_1842	0.37	-2.3
2,158,379	+		Echvi_1842	0.39	-1.7
2,158,477	+		Echvi_1842	0.48	-1.3
2,158,477	+		Echvi_1842	0.48	-1.6
2,158,477	+		Echvi_1842	0.48	-1.9
2,158,477	+		Echvi_1842	0.48	+0.1
2,158,478	-		Echvi_1842	0.48	-2.4
2,158,483	+		Echvi_1842	0.48	+0.6
2,158,661	+		Echvi_1842	0.65	-2.0
2,158,661	+		Echvi_1842	0.65	+0.4
2,158,661	+		Echvi_1842	0.65	-3.4
2,158,661	+		Echvi_1842	0.65	-1.6
2,158,661	+		Echvi_1842	0.65	-2.4
2,158,661	+		Echvi_1842	0.65	-1.0
2,158,662	-		Echvi_1842	0.65	-1.3
2,158,662	-		Echvi_1842	0.65	-2.2
2,158,662	-		Echvi_1842	0.65	-1.3
2,158,748	+		Echvi_1842	0.74	-0.6
2,158,748	+		Echvi_1842	0.74	+0.4
2,158,780	+		Echvi_1842	0.77	-1.0
2,158,781	-		Echvi_1842	0.77	-2.0
2,158,919	+		Echvi_1842	0.90	-0.6
2,158,954	-				+3.3
2,159,189	+		Echvi_1843	0.41	+0.5
2,159,288	+				+0.3
2,159,289	-				-1.6
2,159,461	-		Echvi_1844	0.21	+1.1
2,159,743	-		Echvi_1844	0.45	-1.1
2,159,783	-				+1.7
2,159,886	+		Echvi_1844	0.58	+0.6
2,159,887	-		Echvi_1844	0.58	-0.2
2,159,924	-		Echvi_1844	0.61	+1.7
2,159,942	+		Echvi_1844	0.62	-1.6
2,159,972	-		Echvi_1844	0.65	-0.8
2,159,972	-		Echvi_1844	0.65	-2.2
2,159,972	-		Echvi_1844	0.65	+1.5