Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1789

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
2,103,434	+				-0.6
2,103,461	+				+0.4
2,103,464	+				-3.0
2,103,464	+				-1.4
2,103,486	+				-3.2
2,103,532	+				+0.0
2,103,532	+				+0.3
2,103,532	+				-0.3
2,103,569	-				+1.0
2,103,671	+				+0.5
2,103,671	+				-0.7
2,103,671	+				-0.2
2,103,671	+				+0.9
2,103,677	+				+0.0
2,103,687	+				+0.1
2,104,379	+				+0.8
2,104,415	+				+1.0
2,104,415	+				+2.3
2,104,423	+				-0.1
2,104,433	-				+0.7
2,104,446	+				+1.1
2,104,446	+		Echvi_1789	0.12	+2.1
2,104,446	+		Echvi_1789	0.12	+0.8
2,104,446	+		Echvi_1789	0.12	+1.5
2,104,541	-		Echvi_1789	0.30	+3.3
2,104,623	+		Echvi_1789	0.46	+1.4
2,104,625	+		Echvi_1789	0.47	+1.0
2,104,625	+		Echvi_1789	0.47	+1.2
2,104,625	+		Echvi_1789	0.47	+1.1
2,104,625	+		Echvi_1789	0.47	+2.0
2,104,625	+		Echvi_1789	0.47	+1.5
2,104,625	+		Echvi_1789	0.47	+0.7
2,104,625	+		Echvi_1789	0.47	+0.5
2,104,625	+		Echvi_1789	0.47	+1.3
2,104,625	+		Echvi_1789	0.47	+1.6
2,104,625	+		Echvi_1789	0.47	+2.0
2,104,625	+		Echvi_1789	0.47	+1.9
2,104,626	-		Echvi_1789	0.47	-0.6
2,104,626	-		Echvi_1789	0.47	+2.3
2,104,626	-		Echvi_1789	0.47	+1.4
2,104,626	-		Echvi_1789	0.47	+1.7
2,104,642	-		Echvi_1789	0.50	+1.6
2,104,642	-		Echvi_1789	0.50	+1.4
2,104,682	-		Echvi_1789	0.58	-1.4
2,104,699	-		Echvi_1789	0.61	+0.9
2,104,703	-		Echvi_1789	0.62	+0.9
2,104,756	+		Echvi_1789	0.73	+0.9
2,104,813	+		Echvi_1789	0.84	+1.6
2,104,842	-		Echvi_1789	0.89	+2.7
2,104,844	+		Echvi_1789	0.90	+1.1
2,104,849	-				-1.4
2,104,849	-				+0.4
2,104,849	-				+1.2
2,104,849	-				+0.7
2,104,849	-				+1.3
2,104,863	-				+1.1
2,104,865	+				+1.7
2,104,905	+				+0.1
2,104,985	+				-0.1
2,105,187	+				-0.7
2,105,187	+				-0.3