Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1571

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,803,018	+				-0.8
1,803,019	-				-3.2
1,803,033	+				-2.2
1,803,033	+				-1.7
1,803,033	+				+0.6
1,803,034	-				-0.6
1,803,034	-				-2.7
1,803,145	+		Echvi_1569	0.15	-2.6
1,803,145	+		Echvi_1569	0.15	+2.3
1,803,145	+		Echvi_1569	0.15	-0.8
1,803,145	+		Echvi_1569	0.15	-0.8
1,803,145	+		Echvi_1569	0.15	-0.5
1,803,145	+		Echvi_1569	0.15	+0.4
1,803,145	+		Echvi_1569	0.15	-2.6
1,803,176	-		Echvi_1569	0.20	+0.9
1,803,332	-		Echvi_1569	0.41	-0.6
1,803,407	+		Echvi_1569	0.51	-0.0
1,803,407	+		Echvi_1569	0.51	-0.2
1,803,407	+		Echvi_1569	0.51	-3.0
1,803,431	+		Echvi_1569	0.54	-0.1
1,803,431	+		Echvi_1569	0.54	-0.2
1,803,432	-		Echvi_1569	0.54	-1.2
1,803,432	-		Echvi_1569	0.54	+0.2
1,803,432	-		Echvi_1569	0.54	-0.2
1,803,432	-		Echvi_1569	0.54	+0.2
1,803,432	-		Echvi_1569	0.54	-2.0
1,803,432	-		Echvi_1569	0.54	+0.9
1,803,509	+		Echvi_1569	0.65	+0.4
1,803,510	-		Echvi_1569	0.65	-0.4
1,803,510	-		Echvi_1569	0.65	+2.3
1,803,521	+		Echvi_1569	0.66	+3.1
1,803,521	+		Echvi_1569	0.66	-2.3
1,803,521	+		Echvi_1569	0.66	-0.1
1,803,527	+		Echvi_1569	0.67	-1.1
1,803,528	-		Echvi_1569	0.67	-0.0
1,803,528	-		Echvi_1569	0.67	-1.6
1,803,532	+		Echvi_1569	0.68	-1.0
1,803,533	-		Echvi_1569	0.68	-0.2
1,803,559	-		Echvi_1569	0.71	-1.9
1,803,667	-		Echvi_1569	0.86	-0.6
1,803,738	-				-1.1
1,803,738	-				-1.2
1,803,741	+				+0.2
1,803,741	+				+0.3
1,803,741	+				+0.2
1,803,741	+				-1.0
1,803,741	+				-0.3
1,803,741	+				-0.3
1,803,742	-				+1.7
1,803,742	-				+2.0
1,803,742	-				-1.5
1,803,749	+				-1.1
1,803,749	+				-2.6
1,803,750	-				-0.3
1,803,750	-				-3.0
1,803,751	+				-1.6
1,803,752	-				+2.0
1,803,761	+				-2.0
1,803,770	-				-3.5
1,803,784	-				+0.3
1,803,795	+				-1.7
1,803,796	-		Echvi_1570	0.11	+0.0
1,803,836	+		Echvi_1570	0.41	-1.5
1,803,837	-		Echvi_1570	0.42	-0.1
1,803,847	-		Echvi_1570	0.49	-0.8
1,803,901	+				-1.1
1,803,902	-				+0.8
1,803,902	-				-1.1
1,803,902	-				+2.6
1,803,902	-				-2.6
1,803,906	+				-1.0
1,803,907	-				-2.6
1,803,932	+				-1.6
1,803,932	+				+0.2
1,803,932	+				-3.6
1,803,933	-				-0.3
1,803,981	+				-1.2
1,803,991	-				-0.4
1,804,008	+				+1.1
1,804,009	-				+0.1
1,804,075	-				-1.1
1,804,076	+				-1.4
1,804,077	-				-0.4
1,804,077	-				+0.2
1,804,119	+				-0.9
1,804,120	-				-0.3
1,804,229	-				-0.7
1,804,230	+				-0.4
1,804,231	-				-1.8
1,804,319	+		Echvi_1571	0.12	+0.3
1,804,443	+		Echvi_1571	0.17	-0.4
1,804,444	-		Echvi_1571	0.17	+1.2
1,804,444	-		Echvi_1571	0.17	-2.4
1,804,526	+		Echvi_1571	0.21	-0.8
1,804,527	-		Echvi_1571	0.21	+0.1
1,804,527	-		Echvi_1571	0.21	-1.6
1,804,570	+		Echvi_1571	0.22	-1.2
1,804,570	+		Echvi_1571	0.22	-1.3
1,804,570	+		Echvi_1571	0.22	-2.9
1,804,570	+		Echvi_1571	0.22	-1.0
1,804,570	+		Echvi_1571	0.22	+0.0
1,804,570	+		Echvi_1571	0.22	-0.8
1,804,570	+		Echvi_1571	0.22	+0.3
1,804,571	-		Echvi_1571	0.23	+0.7
1,804,571	-		Echvi_1571	0.23	-0.6
1,804,572	+		Echvi_1571	0.23	+0.6
1,804,601	+		Echvi_1571	0.24	-2.8
1,804,734	-		Echvi_1571	0.29	+0.5
1,804,735	-		Echvi_1571	0.29	-0.7
1,804,735	-		Echvi_1571	0.29	-1.2
1,804,735	-		Echvi_1571	0.29	+0.4
1,804,739	-		Echvi_1571	0.29	+0.1
1,804,766	-		Echvi_1571	0.30	-0.8
1,804,771	+		Echvi_1571	0.31	-2.2
1,804,837	+		Echvi_1571	0.33	+0.2
1,804,838	-		Echvi_1571	0.33	+1.3
1,804,848	+		Echvi_1571	0.34	+0.2
1,804,883	-		Echvi_1571	0.35	+0.0
1,804,934	+		Echvi_1571	0.37	-0.8
1,804,935	-		Echvi_1571	0.37	+0.4
1,805,016	+		Echvi_1571	0.41	-0.5
1,805,031	+		Echvi_1571	0.41	-0.3
1,805,031	+		Echvi_1571	0.41	+0.0
1,805,032	-		Echvi_1571	0.41	-0.9
1,805,047	+		Echvi_1571	0.42	-2.5
1,805,047	+		Echvi_1571	0.42	-1.0
1,805,047	+		Echvi_1571	0.42	-1.0
1,805,048	-		Echvi_1571	0.42	-0.7
1,805,048	-		Echvi_1571	0.42	-0.2
1,805,065	-		Echvi_1571	0.43	-0.1
1,805,081	+		Echvi_1571	0.43	-1.7
1,805,081	+		Echvi_1571	0.43	+0.5
1,805,081	+		Echvi_1571	0.43	-0.7
1,805,204	+		Echvi_1571	0.48	+1.0
1,805,363	+		Echvi_1571	0.55	-2.0
1,805,401	+		Echvi_1571	0.56	-0.3
1,805,401	+		Echvi_1571	0.56	-1.4
1,805,533	-		Echvi_1571	0.62	+0.4
1,805,565	+		Echvi_1571	0.63	-0.8
1,805,568	+		Echvi_1571	0.63	+0.7
1,805,569	-		Echvi_1571	0.63	-0.4
1,805,676	+		Echvi_1571	0.68	-0.2
1,805,677	-		Echvi_1571	0.68	+0.5
1,805,692	+		Echvi_1571	0.68	+0.7
1,805,755	+		Echvi_1571	0.71	+1.3
1,805,755	+		Echvi_1571	0.71	-0.3
1,805,755	+		Echvi_1571	0.71	-0.6
1,805,756	-		Echvi_1571	0.71	+0.2
1,805,756	-		Echvi_1571	0.71	-0.8
1,805,756	-		Echvi_1571	0.71	-0.0
1,805,756	-		Echvi_1571	0.71	+0.7
1,805,757	+		Echvi_1571	0.71	+0.8
1,805,757	+		Echvi_1571	0.71	-2.0
1,805,758	-		Echvi_1571	0.71	+1.0
1,805,758	-		Echvi_1571	0.71	-0.6
1,805,761	+		Echvi_1571	0.71	+0.7
1,805,762	-		Echvi_1571	0.71	-0.1
1,805,762	-		Echvi_1571	0.71	+0.5
1,805,764	-		Echvi_1571	0.71	+0.0
1,805,783	-		Echvi_1571	0.72	-0.4
1,805,836	+		Echvi_1571	0.74	-3.1
1,805,841	+		Echvi_1571	0.74	-0.7
1,805,842	-		Echvi_1571	0.74	-0.6
1,805,845	+		Echvi_1571	0.74	-2.4
1,805,845	+		Echvi_1571	0.74	-1.1
1,805,846	-		Echvi_1571	0.74	-1.3
1,805,863	+		Echvi_1571	0.75	-1.1
1,805,864	-		Echvi_1571	0.75	+1.7
1,805,866	+		Echvi_1571	0.75	-0.5
1,805,944	-		Echvi_1571	0.78	-2.5
1,805,951	-		Echvi_1571	0.79	+0.3
1,805,951	-		Echvi_1571	0.79	-1.8
1,805,982	+		Echvi_1571	0.80	+0.6
1,805,989	+		Echvi_1571	0.80	-1.3
1,805,992	+		Echvi_1571	0.80	-3.0
1,805,992	+		Echvi_1571	0.80	+0.9
1,805,993	-		Echvi_1571	0.80	+0.7
1,805,993	-		Echvi_1571	0.80	+0.7
1,805,993	-		Echvi_1571	0.80	-0.6
1,805,993	-		Echvi_1571	0.80	+0.5
1,805,994	+		Echvi_1571	0.81	-1.9
1,805,994	+		Echvi_1571	0.81	-2.5
1,805,994	+		Echvi_1571	0.81	-1.4
1,805,994	+		Echvi_1571	0.81	-1.6
1,805,994	+		Echvi_1571	0.81	-0.5
1,805,995	-		Echvi_1571	0.81	-1.0
1,805,995	-		Echvi_1571	0.81	+0.2
1,805,995	-		Echvi_1571	0.81	-1.3
1,805,995	-		Echvi_1571	0.81	+1.3
1,805,997	+		Echvi_1571	0.81	-2.5
1,805,997	+		Echvi_1571	0.81	-1.3
1,806,045	+		Echvi_1571	0.83	-1.3
1,806,045	+		Echvi_1571	0.83	+1.7
1,806,046	-		Echvi_1571	0.83	-0.9
1,806,046	-		Echvi_1571	0.83	-0.8
1,806,046	-		Echvi_1571	0.83	-0.3
1,806,046	-		Echvi_1571	0.83	-0.7
1,806,073	+		Echvi_1571	0.84	-0.0
1,806,103	-		Echvi_1571	0.85	-0.2
1,806,103	-		Echvi_1571	0.85	-0.1
1,806,127	-		Echvi_1571	0.86	-1.4
1,806,172	+		Echvi_1571	0.88	+0.5
1,806,284	-				+0.9
1,806,284	-				+1.0
1,806,284	-				+0.8
1,806,301	-				+1.2
1,806,507	+				-1.4
1,806,508	-				+0.2
1,806,529	-				-1.3
1,806,559	+				-2.6
1,806,596	+				-0.6
1,806,596	+				+0.7
1,806,596	+				-1.7
1,806,597	-				-0.5
1,806,597	-				-0.1
1,806,621	+				-1.0
1,806,630	+				-1.7
1,806,630	+				-1.1
1,806,630	+				-1.0
1,806,630	+				+1.0
1,806,631	-				+0.5
1,806,631	-				+0.2
1,806,631	-				+1.4
1,806,631	-				+0.3
1,806,631	-				+0.2
1,806,631	-				+0.4
1,806,634	+				-1.6
1,806,736	+				+1.2
1,806,736	+				-0.3
1,806,737	-				-1.1
1,806,737	-				+0.4
1,806,737	-				-0.1
1,806,750	+				-0.5
1,806,751	-				+0.1
1,806,759	+				+0.3
1,806,869	-		Echvi_1572	0.13	-0.4
1,806,869	-		Echvi_1572	0.13	-0.1
1,806,932	+		Echvi_1572	0.16	-1.1
1,806,932	+		Echvi_1572	0.16	-0.3
1,806,955	+		Echvi_1572	0.17	-2.0
1,806,956	-		Echvi_1572	0.17	+1.7
1,807,014	+		Echvi_1572	0.20	-2.5
1,807,234	-		Echvi_1572	0.30	-0.1
1,807,241	-		Echvi_1572	0.30	+1.1
1,807,251	+		Echvi_1572	0.31	-0.9
1,807,252	-		Echvi_1572	0.31	-1.3
1,807,252	-		Echvi_1572	0.31	-1.0
1,807,419	+		Echvi_1572	0.39	-0.5
1,807,420	-		Echvi_1572	0.39	+2.1
1,807,457	+		Echvi_1572	0.41	+0.1
1,807,458	-		Echvi_1572	0.41	-1.2
1,807,458	-		Echvi_1572	0.41	+0.6