Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1542

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,766,335	+		Echvi_1541	0.76	+0.3
1,766,335	+		Echvi_1541	0.76	-0.9
1,766,367	-		Echvi_1541	0.78	-1.1
1,766,375	+		Echvi_1541	0.79	+0.5
1,766,412	+		Echvi_1541	0.81	-0.2
1,766,412	+		Echvi_1541	0.81	+0.7
1,766,413	-		Echvi_1541	0.81	+1.8
1,766,413	-		Echvi_1541	0.81	-0.8
1,766,413	-		Echvi_1541	0.81	+0.2
1,766,413	-		Echvi_1541	0.81	-2.4
1,766,457	+		Echvi_1541	0.84	+0.1
1,766,457	+		Echvi_1541	0.84	-0.0
1,766,458	-		Echvi_1541	0.84	+0.0
1,766,478	-		Echvi_1541	0.85	-0.1
1,766,478	-		Echvi_1541	0.85	-0.7
1,766,512	+		Echvi_1541	0.87	-0.1
1,766,531	-		Echvi_1541	0.88	+0.9
1,766,531	-		Echvi_1541	0.88	-1.0
1,766,543	+		Echvi_1541	0.89	-1.2
1,766,543	+		Echvi_1541	0.89	+0.1
1,766,544	-		Echvi_1541	0.89	-0.7
1,766,544	-		Echvi_1541	0.89	+0.7
1,766,544	-		Echvi_1541	0.89	-1.1
1,766,544	-		Echvi_1541	0.89	+0.5
1,766,544	-		Echvi_1541	0.89	+0.8
1,766,699	-				+0.5
1,766,699	-				+0.8
1,766,828	+				+3.2
1,766,840	-				-0.8
1,766,840	-				-0.6
1,766,956	-				-0.5
1,766,966	+				-1.1
1,766,971	-				+1.0
1,766,981	+				+2.5
1,767,005	+				+3.5
1,767,014	-				+0.6
1,767,014	-				-2.3
1,767,077	+				+3.0
1,767,077	+				+2.4
1,767,175	-				+1.5
1,767,227	+				+3.1
1,767,230	+				+3.1
1,767,231	-				-0.8
1,767,326	+				-0.9
1,767,328	+				-0.6
1,767,329	-				-1.8
1,767,353	+				-0.6
1,767,353	+				-2.2
1,767,362	+				-1.9
1,767,362	+				+0.8
1,767,423	+				-1.6
1,767,424	-				-1.5
1,767,475	+				-0.7
1,767,586	-		Echvi_1542	0.10	-0.7
1,767,666	+		Echvi_1542	0.13	-2.4
1,767,666	+		Echvi_1542	0.13	-0.1
1,767,666	+		Echvi_1542	0.13	-1.5
1,767,666	+		Echvi_1542	0.13	-2.0
1,767,666	+		Echvi_1542	0.13	-2.8
1,767,732	-		Echvi_1542	0.15	-1.6
1,767,784	-		Echvi_1542	0.17	-2.6
1,767,837	+		Echvi_1542	0.19	+0.3
1,767,837	+		Echvi_1542	0.19	-3.1
1,767,848	-		Echvi_1542	0.19	-1.1
1,767,896	-		Echvi_1542	0.21	-1.9
1,767,985	+				+0.8
1,767,985	+		Echvi_1542	0.24	-1.5
1,768,089	-		Echvi_1542	0.27	-2.2
1,768,089	-		Echvi_1542	0.27	-2.4
1,768,196	-		Echvi_1542	0.31	-2.1
1,768,232	+		Echvi_1542	0.32	-1.1
1,768,233	-		Echvi_1542	0.32	-1.0
1,768,258	+		Echvi_1542	0.33	-3.6
1,768,258	+		Echvi_1542	0.33	-1.8
1,768,259	-		Echvi_1542	0.33	-2.7
1,768,261	-		Echvi_1542	0.33	+1.4
1,768,312	+		Echvi_1542	0.35	+0.2
1,768,316	+		Echvi_1542	0.35	-2.5
1,768,317	-		Echvi_1542	0.35	-1.2
1,768,317	-		Echvi_1542	0.35	-2.7
1,768,466	+		Echvi_1542	0.40	-1.7
1,768,467	-		Echvi_1542	0.40	-1.6
1,768,584	-		Echvi_1542	0.44	-0.6
1,768,630	-		Echvi_1542	0.46	-2.2
1,768,725	+		Echvi_1542	0.49	-2.8
1,768,770	+		Echvi_1542	0.50	-2.6
1,768,823	-		Echvi_1542	0.52	-2.6
1,768,823	-		Echvi_1542	0.52	-0.4
1,769,015	+		Echvi_1542	0.59	-1.4
1,769,015	+		Echvi_1542	0.59	-2.2
1,769,022	+		Echvi_1542	0.59	-1.9
1,769,023	-		Echvi_1542	0.59	-1.9
1,769,035	+		Echvi_1542	0.59	-0.7
1,769,036	-		Echvi_1542	0.59	-1.5
1,769,121	+		Echvi_1542	0.62	-0.8
1,769,121	+		Echvi_1542	0.62	-0.2
1,769,122	-		Echvi_1542	0.62	+0.8
1,769,122	-		Echvi_1542	0.62	-1.4
1,769,122	-		Echvi_1542	0.62	-0.8
1,769,156	-		Echvi_1542	0.63	-1.4
1,769,184	-		Echvi_1542	0.64	-2.3
1,769,184	-		Echvi_1542	0.64	+0.3
1,769,184	-		Echvi_1542	0.64	-2.2
1,769,184	-		Echvi_1542	0.64	-1.1
1,769,184	-		Echvi_1542	0.64	-0.7
1,769,184	-		Echvi_1542	0.64	+0.2
1,769,184	-		Echvi_1542	0.64	-3.9
1,769,187	-		Echvi_1542	0.64	-0.6
1,769,206	+		Echvi_1542	0.65	-1.6
1,769,206	+		Echvi_1542	0.65	-1.1
1,769,206	+		Echvi_1542	0.65	-1.4
1,769,206	+		Echvi_1542	0.65	-2.3
1,769,207	-		Echvi_1542	0.65	-2.5
1,769,207	-		Echvi_1542	0.65	-2.8
1,769,209	-		Echvi_1542	0.65	-0.1
1,769,214	-		Echvi_1542	0.65	-3.4
1,769,308	-		Echvi_1542	0.69	-2.4
1,769,325	+		Echvi_1542	0.69	-1.2
1,769,569	+		Echvi_1542	0.77	-0.4
1,769,587	+		Echvi_1542	0.78	+1.4
1,769,591	-		Echvi_1542	0.78	+0.3
1,769,646	+		Echvi_1542	0.80	-0.6
1,769,647	-		Echvi_1542	0.80	-1.9
1,769,647	-		Echvi_1542	0.80	-3.2
1,769,714	-		Echvi_1542	0.82	-3.1
1,769,714	-		Echvi_1542	0.82	-2.2
1,769,716	-		Echvi_1542	0.82	-1.1
1,769,792	+		Echvi_1542	0.85	-1.8
1,769,793	-		Echvi_1542	0.85	-2.7
1,769,796	+		Echvi_1542	0.85	-1.1
1,769,797	-		Echvi_1542	0.85	+0.8
1,769,834	-		Echvi_1542	0.86	-0.4
1,769,857	+		Echvi_1542	0.87	-0.1
1,769,964	-				-2.9
1,769,971	-				-2.9
1,769,990	-				-1.6
1,770,073	-				-0.8
1,770,073	-				+0.8
1,770,186	+				-2.5
1,770,186	+				+0.0
1,770,229	+				+0.0
1,770,229	+				+0.7
1,770,303	+				-1.7
1,770,338	+				+1.8
1,770,339	-				-1.6
1,770,344	+				-1.6
1,770,375	-				-0.1
1,770,379	-				+0.5
1,770,432	+				-1.3
1,770,432	+				+0.9
1,770,504	-				+1.5
1,770,625	-				+0.3
1,770,650	+				+0.6
1,770,654	-				+0.8
1,770,692	+				+0.9
1,770,692	+				-0.7
1,770,693	-				-0.4
1,770,695	+				+0.8
1,770,695	+				-1.2
1,770,696	-				+0.1
1,770,696	-				-1.8
1,770,696	-				+0.8
1,770,750	-				+2.8
1,770,779	+		Echvi_1543	0.12	+0.2
1,770,787	+		Echvi_1543	0.13	-0.1
1,770,787	+		Echvi_1543	0.13	+0.8
1,770,988	-		Echvi_1543	0.36	+0.3
1,771,001	-		Echvi_1543	0.38	+2.3
1,771,003	+		Echvi_1543	0.38	+0.6
1,771,004	-		Echvi_1543	0.38	+1.8
1,771,004	-		Echvi_1543	0.38	+1.0
1,771,094	-		Echvi_1543	0.49	+0.0
1,771,100	+		Echvi_1543	0.49	+0.5
1,771,101	-		Echvi_1543	0.49	-1.2
1,771,151	+		Echvi_1543	0.55	-0.2
1,771,151	+		Echvi_1543	0.55	+3.8
1,771,192	+		Echvi_1543	0.60	-1.1
1,771,192	+		Echvi_1543	0.60	+0.8
1,771,193	-		Echvi_1543	0.60	+0.4
1,771,193	-		Echvi_1543	0.60	+0.5
1,771,193	-		Echvi_1543	0.60	-0.4
1,771,194	+		Echvi_1543	0.60	+0.0
1,771,194	+		Echvi_1543	0.60	-1.4
1,771,195	-		Echvi_1543	0.60	+1.4
1,771,195	-		Echvi_1543	0.60	+1.4
1,771,195	-		Echvi_1543	0.60	+0.3
1,771,195	-		Echvi_1543	0.60	+0.7
1,771,195	-		Echvi_1543	0.60	-0.8
1,771,195	-		Echvi_1543	0.60	-0.3
1,771,195	-		Echvi_1543	0.60	-1.9
1,771,203	-		Echvi_1543	0.61	+0.8