Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1540

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,762,846	+		Echvi_1538	0.79	+2.8
1,762,848	+		Echvi_1538	0.79	+2.4
1,762,848	+		Echvi_1538	0.79	+2.7
1,762,849	-		Echvi_1538	0.79	+1.4
1,762,849	-		Echvi_1538	0.79	+2.8
1,762,897	-		Echvi_1538	0.83	+2.0
1,762,899	+		Echvi_1538	0.83	+2.6
1,762,899	+		Echvi_1538	0.83	+2.5
1,762,938	+		Echvi_1538	0.86	+2.2
1,762,939	-		Echvi_1538	0.86	+2.3
1,762,939	-		Echvi_1538	0.86	+2.3
1,762,939	-		Echvi_1538	0.86	+2.2
1,762,986	+		Echvi_1538	0.89	+0.8
1,762,987	-		Echvi_1538	0.89	+1.9
1,762,987	-		Echvi_1538	0.89	+1.8
1,762,987	-		Echvi_1538	0.89	-0.2
1,763,025	+				+0.4
1,763,109	+				+0.3
1,763,109	+				+1.5
1,763,110	-				-0.6
1,763,110	-				+1.5
1,763,110	-				+2.3
1,763,110	-				+2.4
1,763,132	+				+1.3
1,763,133	-				+1.0
1,763,195	+				+0.5
1,763,196	-				+1.4
1,763,206	-				-0.9
1,763,206	-				-0.8
1,763,206	-				+0.9
1,763,206	-				+1.4
1,763,206	-				+0.2
1,763,206	-				-0.3
1,763,206	-				+0.1
1,763,210	-				+0.7
1,763,210	-				+0.3
1,763,210	-				+2.3
1,763,210	-				-2.5
1,763,210	-				+0.3
1,763,269	+				-0.6
1,763,269	+				+0.9
1,763,269	+				+0.5
1,763,269	+				-0.0
1,763,694	+				+0.2
1,763,694	+				-0.3
1,763,695	-				+0.2
1,763,695	-				-1.1
1,763,695	-				+1.0
1,764,941	+				+0.4
1,764,941	+				+0.1
1,764,942	-				+0.0
1,765,010	-				+2.0
1,765,010	-				-0.1
1,765,140	-				-2.8
1,765,146	-				-1.5
1,765,149	+				+0.5
1,765,150	-				-0.1
1,765,194	+				-0.9
1,765,194	+				-0.9
1,765,194	+				+0.9
1,765,194	+				-0.5
1,765,194	+				-2.1
1,765,194	+				+0.5
1,765,194	+				-0.6
1,765,195	-				-0.6
1,765,195	-				+1.1
1,765,196	+				-0.4
1,765,196	+				+0.3
1,765,393	+		Echvi_1541	0.16	-1.2
1,765,455	-		Echvi_1541	0.20	-0.1
1,765,470	+		Echvi_1541	0.21	-1.3
1,765,470	+		Echvi_1541	0.21	-2.4
1,765,471	-		Echvi_1541	0.21	+0.4
1,765,472	+		Echvi_1541	0.21	-0.5
1,765,486	+		Echvi_1541	0.22	+0.1
1,765,486	+		Echvi_1541	0.22	-0.7
1,765,561	-		Echvi_1541	0.27	-1.4
1,765,663	-		Echvi_1541	0.33	-1.0
1,765,685	+		Echvi_1541	0.35	+0.4
1,765,685	+		Echvi_1541	0.35	+0.0
1,765,741	-		Echvi_1541	0.38	-0.3
1,765,850	-		Echvi_1541	0.45	-0.3
1,765,850	-		Echvi_1541	0.45	+0.4
1,765,866	+		Echvi_1541	0.46	+0.7
1,765,930	-		Echvi_1541	0.50	+0.2