Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1538

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,761,192	+				-1.1
1,761,310	+				+1.2
1,761,312	+				+0.5
1,761,420	-		Echvi_1537	0.29	-0.2
1,761,435	-		Echvi_1537	0.32	+0.5
1,761,435	-		Echvi_1537	0.32	+0.3
1,761,459	+		Echvi_1537	0.38	-0.4
1,761,460	-		Echvi_1537	0.38	-3.4
1,761,462	+		Echvi_1537	0.39	+0.3
1,761,463	-		Echvi_1537	0.39	-0.4
1,761,463	-		Echvi_1537	0.39	-0.1
1,761,490	+		Echvi_1537	0.45	+0.1
1,761,491	-		Echvi_1537	0.45	+1.8
1,761,492	+		Echvi_1537	0.45	-0.6
1,761,492	+		Echvi_1537	0.45	+0.1
1,761,492	+		Echvi_1537	0.45	-0.9
1,761,492	+		Echvi_1537	0.45	+0.2
1,761,493	-		Echvi_1537	0.46	+1.3
1,761,516	+		Echvi_1537	0.51	-0.6
1,761,517	-		Echvi_1537	0.51	+0.0
1,761,517	-		Echvi_1537	0.51	-1.4
1,761,643	-		Echvi_1537	0.80	+0.5
1,761,643	-		Echvi_1537	0.80	-0.2
1,761,723	+				-0.4
1,761,723	+				+0.5
1,761,738	+				+0.6
1,761,768	+				+0.5
1,761,778	+				+0.2
1,761,779	-				-1.5
1,761,859	+				+0.6
1,761,898	-				+0.5
1,761,902	-				+0.2
1,761,902	-				-2.2
1,761,902	-				-1.2
1,761,934	-		Echvi_1538	0.10	-1.1
1,761,994	-		Echvi_1538	0.15	+0.3
1,762,052	+		Echvi_1538	0.19	+0.2
1,762,053	-		Echvi_1538	0.19	+0.8
1,762,053	-		Echvi_1538	0.19	-0.2
1,762,053	-		Echvi_1538	0.19	-2.2
1,762,121	+		Echvi_1538	0.24	+2.3
1,762,121	+		Echvi_1538	0.24	+2.6
1,762,121	+		Echvi_1538	0.24	+5.5
1,762,127	-		Echvi_1538	0.25	+1.7
1,762,128	+		Echvi_1538	0.25	+2.0
1,762,143	+		Echvi_1538	0.26	+0.9
1,762,153	+		Echvi_1538	0.27	+1.8
1,762,154	-		Echvi_1538	0.27	+2.1
1,762,167	-		Echvi_1538	0.28	+3.5
1,762,167	-		Echvi_1538	0.28	+2.2
1,762,167	-		Echvi_1538	0.28	+1.2
1,762,191	-		Echvi_1538	0.30	+3.0
1,762,221	-		Echvi_1538	0.32	-0.2
1,762,221	-		Echvi_1538	0.32	+0.6
1,762,237	-		Echvi_1538	0.33	+3.0
1,762,237	-		Echvi_1538	0.33	+1.7
1,762,330	+		Echvi_1538	0.40	+1.7
1,762,330	+		Echvi_1538	0.40	+3.2
1,762,331	-		Echvi_1538	0.40	+2.5
1,762,331	-		Echvi_1538	0.40	+1.8
1,762,331	-		Echvi_1538	0.40	+2.2
1,762,444	-		Echvi_1538	0.49	+0.2
1,762,444	-		Echvi_1538	0.49	+1.9
1,762,444	-		Echvi_1538	0.49	+2.0
1,762,444	-		Echvi_1538	0.49	+0.7
1,762,448	+		Echvi_1538	0.49	+2.3
1,762,449	-		Echvi_1538	0.49	+1.7
1,762,449	-		Echvi_1538	0.49	+2.5
1,762,449	-		Echvi_1538	0.49	+2.5
1,762,449	-		Echvi_1538	0.49	+2.1
1,762,449	-		Echvi_1538	0.49	+1.5
1,762,449	-		Echvi_1538	0.49	+2.4
1,762,463	-		Echvi_1538	0.50	+3.8
1,762,463	-		Echvi_1538	0.50	+1.6
1,762,534	+		Echvi_1538	0.55	+1.8
1,762,534	+		Echvi_1538	0.55	+2.2
1,762,534	+		Echvi_1538	0.55	+0.8
1,762,534	+		Echvi_1538	0.55	+2.2
1,762,534	+		Echvi_1538	0.55	+1.2
1,762,535	-		Echvi_1538	0.55	+2.1
1,762,640	+		Echvi_1538	0.63	+2.9
1,762,846	+		Echvi_1538	0.79	+2.8
1,762,848	+		Echvi_1538	0.79	+2.4
1,762,848	+		Echvi_1538	0.79	+2.7
1,762,849	-		Echvi_1538	0.79	+1.4
1,762,849	-		Echvi_1538	0.79	+2.8
1,762,897	-		Echvi_1538	0.83	+2.0
1,762,899	+		Echvi_1538	0.83	+2.6
1,762,899	+		Echvi_1538	0.83	+2.5
1,762,938	+		Echvi_1538	0.86	+2.2
1,762,939	-		Echvi_1538	0.86	+2.3
1,762,939	-		Echvi_1538	0.86	+2.3
1,762,939	-		Echvi_1538	0.86	+2.2
1,762,986	+		Echvi_1538	0.89	+0.8
1,762,987	-		Echvi_1538	0.89	+1.9
1,762,987	-		Echvi_1538	0.89	+1.8
1,762,987	-		Echvi_1538	0.89	-0.2
1,763,025	+				+0.4
1,763,109	+				+0.3
1,763,109	+				+1.5
1,763,110	-				-0.6
1,763,110	-				+1.5
1,763,110	-				+2.3
1,763,110	-				+2.4
1,763,132	+				+1.3
1,763,133	-				+1.0
1,763,195	+				+0.5
1,763,196	-				+1.4
1,763,206	-				-0.9
1,763,206	-				-0.8
1,763,206	-				+0.9
1,763,206	-				+1.4
1,763,206	-				+0.2
1,763,206	-				-0.3
1,763,206	-				+0.1
1,763,210	-				+0.7
1,763,210	-				+0.3
1,763,210	-				+2.3
1,763,210	-				-2.5
1,763,210	-				+0.3
1,763,269	+				-0.6
1,763,269	+				+0.9
1,763,269	+				+0.5
1,763,269	+				-0.0
1,763,694	+				+0.2
1,763,694	+				-0.3
1,763,695	-				+0.2
1,763,695	-				-1.1
1,763,695	-				+1.0