Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1531

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,754,922	-		Echvi_1530	0.19	+0.2
1,754,922	-		Echvi_1530	0.19	+0.1
1,754,952	-		Echvi_1530	0.24	-0.5
1,754,952	-		Echvi_1530	0.24	+0.3
1,754,991	+		Echvi_1530	0.29	+0.2
1,754,991	+		Echvi_1530	0.29	+0.9
1,755,004	-		Echvi_1530	0.31	-0.1
1,755,031	+		Echvi_1530	0.35	+0.2
1,755,031	+		Echvi_1530	0.35	-0.2
1,755,031	+		Echvi_1530	0.35	-0.6
1,755,031	+		Echvi_1530	0.35	+0.2
1,755,031	+		Echvi_1530	0.35	+0.3
1,755,031	+		Echvi_1530	0.35	+0.2
1,755,031	+		Echvi_1530	0.35	+0.5
1,755,032	-		Echvi_1530	0.35	+1.3
1,755,122	+		Echvi_1530	0.48	+0.4
1,755,123	-		Echvi_1530	0.48	+0.6
1,755,191	+		Echvi_1530	0.58	-0.4
1,755,191	+		Echvi_1530	0.58	-0.8
1,755,192	-		Echvi_1530	0.58	+1.3
1,755,192	-		Echvi_1530	0.58	-0.4
1,755,213	+		Echvi_1530	0.61	-0.4
1,755,214	-		Echvi_1530	0.61	+1.8
1,755,214	-		Echvi_1530	0.61	+0.5
1,755,214	-		Echvi_1530	0.61	-0.2
1,755,214	-		Echvi_1530	0.61	-0.6
1,755,214	-		Echvi_1530	0.61	+0.3
1,755,267	+		Echvi_1530	0.69	+0.0
1,755,345	+		Echvi_1530	0.80	+0.3
1,755,345	+		Echvi_1530	0.80	+0.5
1,755,346	-		Echvi_1530	0.81	+0.3
1,755,346	-		Echvi_1530	0.81	-2.3
1,755,346	-		Echvi_1530	0.81	-0.6
1,755,347	+		Echvi_1530	0.81	+0.5
1,755,347	+		Echvi_1530	0.81	+2.4
1,755,348	-		Echvi_1530	0.81	+0.4
1,755,348	-		Echvi_1530	0.81	-0.0
1,755,406	+		Echvi_1530	0.89	-0.7
1,755,406	+		Echvi_1530	0.89	+0.0
1,755,406	+		Echvi_1530	0.89	+1.8
1,755,406	+		Echvi_1530	0.89	-0.6
1,755,445	+				-1.5
1,755,449	-				-0.2
1,755,449	-				+1.3
1,755,478	+				+1.8
1,755,479	-				+0.3
1,755,483	+				-0.3
1,755,484	-				+1.2
1,755,484	-				-0.3
1,755,516	+				+2.0
1,755,517	-				+0.4
1,755,524	-				-1.3
1,755,524	-				+0.5
1,755,527	+				-1.7
1,755,527	+				+0.4
1,755,527	+				-1.4
1,755,527	+				-1.2
1,755,528	-				+0.2
1,755,528	-				-0.4
1,755,533	-				+0.2
1,755,554	+				-2.0
1,755,618	+				-0.6
1,755,618	+				-1.4
1,755,618	+				+0.3
1,755,618	+				-0.1
1,755,619	-				-0.1
1,755,619	-				+2.6
1,755,619	-				-0.5
1,755,619	-				-0.3
1,755,619	-				+1.0
1,755,619	-				-0.4
1,755,623	+				-1.3
1,755,624	-				+0.4
1,755,657	-				-1.2
1,755,661	-				-1.0
1,755,663	+				+0.3
1,755,691	+				-1.1
1,755,692	-				-0.1
1,755,803	+				-0.1
1,755,803	+				+0.5
1,755,876	+				-0.2
1,755,878	+				-1.4
1,755,878	+				-0.7
1,755,878	+				+0.5
1,755,878	+				-1.8
1,755,878	+				-1.2
1,755,878	+				+0.4
1,755,879	-				-1.6
1,755,888	+				-0.9
1,755,893	-				+0.1
1,755,893	-				-0.1
1,755,907	-				-0.1
1,755,909	+				-2.2
1,755,909	+				-0.1
1,755,951	-				-0.1
1,755,987	+				+0.3
1,755,987	+				-4.1
1,755,987	+				-0.6
1,755,987	+				-1.4
1,755,987	+				-2.5
1,755,987	+				-1.9
1,755,987	+				+1.5
1,755,988	-				-0.3
1,755,988	-				-2.2
1,756,047	+		Echvi_1531	0.13	-0.6
1,756,056	+		Echvi_1531	0.14	-0.7
1,756,056	+		Echvi_1531	0.14	-0.1
1,756,057	-		Echvi_1531	0.14	-1.2
1,756,057	-		Echvi_1531	0.14	-0.8
1,756,186	-		Echvi_1531	0.27	-1.4
1,756,206	-		Echvi_1531	0.29	-1.4
1,756,356	+		Echvi_1531	0.44	+0.5
1,756,356	+		Echvi_1531	0.44	-2.0
1,756,356	+		Echvi_1531	0.44	-3.2
1,756,356	+		Echvi_1531	0.44	-0.6
1,756,356	+		Echvi_1531	0.44	-2.9
1,756,357	-		Echvi_1531	0.44	+0.8
1,756,378	+		Echvi_1531	0.46	-1.8
1,756,380	+		Echvi_1531	0.47	-1.7
1,756,381	-		Echvi_1531	0.47	-0.7
1,756,472	-		Echvi_1531	0.56	-0.8
1,756,595	+		Echvi_1531	0.68	-0.6
1,756,796	-		Echvi_1531	0.88	-1.9
1,756,910	+				-1.6