Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1487

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,703,893	-		Echvi_1486	0.81	-0.4
1,703,907	+		Echvi_1486	0.81	+2.0
1,703,907	+		Echvi_1486	0.81	+0.4
1,703,907	+		Echvi_1486	0.81	+0.4
1,703,907	+		Echvi_1486	0.81	+0.6
1,703,907	+		Echvi_1486	0.81	+0.6
1,703,910	-		Echvi_1486	0.81	+0.2
1,703,967	-		Echvi_1486	0.83	+1.4
1,704,057	-		Echvi_1486	0.86	+0.2
1,704,101	+		Echvi_1486	0.87	+0.0
1,704,102	-		Echvi_1486	0.87	-1.1
1,704,102	-		Echvi_1486	0.87	-1.1
1,704,105	+		Echvi_1486	0.87	+0.2
1,704,160	+		Echvi_1486	0.89	-0.1
1,704,164	+		Echvi_1486	0.89	+0.8
1,704,199	-		Echvi_1486	0.90	+0.8
1,704,253	+				-0.5
1,704,257	+				+0.0
1,704,257	+				+0.7
1,704,257	+				+1.0
1,704,257	+				+0.1
1,704,257	+				-0.5
1,704,257	+				+0.5
1,704,257	+				-0.6
1,704,258	-				+0.8
1,704,258	-				-0.3
1,704,258	-				+2.3
1,704,258	-				-0.1
1,704,258	-				+0.3
1,704,258	-				-1.2
1,704,312	+				+0.5
1,704,313	-				+0.3
1,704,313	-				+0.8
1,704,338	-				+0.3
1,704,338	-				-1.1
1,704,343	+				+2.3
1,704,360	-				+0.8
1,704,360	-				+0.5
1,704,365	+				+0.9
1,704,365	+				+0.5
1,704,367	+				+1.2
1,704,367	+				+0.1
1,704,373	+				+2.1
1,704,431	-				+1.3
1,704,431	-				+1.5
1,704,431	-				+0.5
1,704,431	-				-0.1
1,704,431	-				+1.7
1,704,431	-				-0.8
1,704,431	-				-0.7
1,704,431	-				-0.3
1,704,431	-				-2.4
1,704,461	-				-0.7
1,704,461	-				+0.3
1,704,482	-				-1.4
1,704,482	-				-1.8
1,704,484	+				+0.4
1,704,485	-				+0.5
1,704,489	+				+0.7
1,704,516	+				+1.7
1,704,516	+				-0.2
1,704,540	+				-0.5
1,704,540	+				+1.7
1,704,560	+				-2.1
1,704,574	+				-1.7
1,704,574	+				-1.7
1,704,585	+				-1.1
1,704,585	+				+0.5
1,704,585	+				+0.3
1,704,586	-				-0.6
1,704,586	-				-2.0
1,704,588	-				+0.2
1,704,594	+				-2.3
1,704,625	+				-1.3
1,704,625	+				+1.4
1,704,626	-				+0.5
1,704,626	-				+0.0
1,704,626	-				-0.1
1,704,638	+				-1.8
1,704,639	-				+0.0
1,704,639	-				+0.4
1,704,674	+				+0.2
1,704,684	+				+0.0
1,704,684	+				+0.5
1,704,685	-				-1.8
1,704,688	+				-1.3
1,704,688	+				+0.1
1,704,689	-				+0.1
1,704,691	+				-0.3
1,704,692	-				+0.8
1,704,735	-				-0.8
1,704,735	-				+1.2
1,704,754	+				+0.4
1,704,781	+				-1.4
1,704,785	+				-0.9
1,704,786	-				-0.6
1,704,808	-				+0.7
1,704,813	+				+0.7
1,704,833	+				-1.3
1,704,834	-				+0.9
1,704,850	-				-3.1
1,704,850	-				-0.0
1,704,887	-				+0.9
1,704,895	-				-1.1
1,704,895	-				-0.5
1,704,899	-				-0.6
1,704,899	-				-1.4
1,704,910	-				-0.3
1,704,926	+				+1.3
1,704,926	+				-0.8
1,704,930	-				-0.3
1,704,952	+				+1.3
1,704,952	+				-2.0
1,704,952	+				+0.1
1,704,976	+				-0.2
1,704,986	-				-1.6
1,704,986	-				-1.0
1,704,986	-				-1.6
1,705,003	+				-1.0
1,705,003	+				-1.0
1,705,004	-				-0.6
1,705,073	+		Echvi_1487	0.11	-1.7
1,705,074	-		Echvi_1487	0.11	-1.4
1,705,075	+		Echvi_1487	0.11	-1.1
1,705,075	+		Echvi_1487	0.11	-2.7
1,705,075	+		Echvi_1487	0.11	-0.4
1,705,075	+		Echvi_1487	0.11	+0.0
1,705,075	+		Echvi_1487	0.11	-2.0
1,705,076	-		Echvi_1487	0.11	+0.0
1,705,076	-		Echvi_1487	0.11	-2.4
1,705,076	-		Echvi_1487	0.11	-1.0
1,705,076	-		Echvi_1487	0.11	-2.2
1,705,076	-		Echvi_1487	0.11	-0.2
1,705,076	-		Echvi_1487	0.11	-0.7
1,705,076	-		Echvi_1487	0.11	-1.4
1,705,079	+		Echvi_1487	0.12	+1.4
1,705,094	+		Echvi_1487	0.12	-1.1
1,705,095	-		Echvi_1487	0.12	-2.4
1,705,097	+		Echvi_1487	0.13	-1.2
1,705,097	+		Echvi_1487	0.13	-2.8
1,705,098	-		Echvi_1487	0.13	+0.1
1,705,098	-		Echvi_1487	0.13	-0.1
1,705,106	-		Echvi_1487	0.13	-1.1
1,705,114	+		Echvi_1487	0.14	-1.7
1,705,114	+		Echvi_1487	0.14	-1.3
1,705,115	-		Echvi_1487	0.14	-0.2
1,705,117	+		Echvi_1487	0.14	-2.8
1,705,118	-		Echvi_1487	0.14	-1.4
1,705,132	+		Echvi_1487	0.15	+0.2
1,705,133	-		Echvi_1487	0.15	-0.3
1,705,180	+		Echvi_1487	0.17	-2.3
1,705,180	+		Echvi_1487	0.17	-0.4
1,705,180	+		Echvi_1487	0.17	-0.4
1,705,181	-		Echvi_1487	0.18	+0.7
1,705,181	-		Echvi_1487	0.18	-1.5
1,705,181	-		Echvi_1487	0.18	-1.7
1,705,253	-		Echvi_1487	0.22	-2.2
1,705,253	-		Echvi_1487	0.22	-1.5
1,705,290	-		Echvi_1487	0.24	-1.1
1,705,354	+		Echvi_1487	0.28	-0.4
1,705,354	+		Echvi_1487	0.28	-4.0
1,705,355	-		Echvi_1487	0.28	+1.2
1,705,355	-		Echvi_1487	0.28	-0.9
1,705,355	-		Echvi_1487	0.28	-2.7
1,705,355	-		Echvi_1487	0.28	+1.3
1,705,355	-		Echvi_1487	0.28	-0.6
1,705,355	-		Echvi_1487	0.28	-0.9
1,705,355	-		Echvi_1487	0.28	-0.7
1,705,355	-		Echvi_1487	0.28	-2.7
1,705,355	-		Echvi_1487	0.28	-2.2
1,705,355	-		Echvi_1487	0.28	-0.2
1,705,379	+		Echvi_1487	0.29	+0.4
1,705,379	+		Echvi_1487	0.29	-0.7
1,705,388	+		Echvi_1487	0.30	-1.6
1,705,400	+		Echvi_1487	0.31	-1.3
1,705,400	+		Echvi_1487	0.31	-1.0
1,705,441	-		Echvi_1487	0.33	-2.6
1,705,477	+		Echvi_1487	0.35	-0.5
1,705,478	-		Echvi_1487	0.35	-3.4
1,705,488	+		Echvi_1487	0.36	-1.9
1,705,488	+		Echvi_1487	0.36	-1.0
1,705,528	-		Echvi_1487	0.38	-0.8
1,705,600	+		Echvi_1487	0.42	-1.7
1,705,601	-		Echvi_1487	0.42	-2.5
1,705,625	+		Echvi_1487	0.44	-1.8
1,705,630	+		Echvi_1487	0.44	-1.2
1,705,631	-		Echvi_1487	0.44	+0.7
1,705,631	-		Echvi_1487	0.44	-2.4
1,705,662	+		Echvi_1487	0.46	-0.3
1,705,687	+		Echvi_1487	0.48	-2.1
1,705,688	-		Echvi_1487	0.48	+0.3
1,705,692	+		Echvi_1487	0.48	-1.9
1,705,712	-		Echvi_1487	0.49	+0.8
1,705,742	-		Echvi_1487	0.51	-1.9
1,705,742	-		Echvi_1487	0.51	-0.3
1,705,758	-		Echvi_1487	0.52	-1.4
1,705,814	+		Echvi_1487	0.55	-2.9
1,705,981	+		Echvi_1487	0.65	-1.1
1,705,981	+		Echvi_1487	0.65	-1.1
1,706,018	-		Echvi_1487	0.67	+0.3
1,706,045	+		Echvi_1487	0.69	-3.8
1,706,068	+		Echvi_1487	0.70	-2.2
1,706,068	+		Echvi_1487	0.70	+0.0
1,706,072	-		Echvi_1487	0.70	-1.2
1,706,081	-		Echvi_1487	0.71	-0.3
1,706,081	-		Echvi_1487	0.71	-1.1
1,706,116	+		Echvi_1487	0.73	+0.0
1,706,116	+		Echvi_1487	0.73	-0.9
1,706,116	+		Echvi_1487	0.73	-1.3
1,706,116	+		Echvi_1487	0.73	-0.3
1,706,117	-		Echvi_1487	0.73	-1.7
1,706,117	-		Echvi_1487	0.73	+0.0
1,706,117	-		Echvi_1487	0.73	-0.5
1,706,162	+		Echvi_1487	0.76	-3.8
1,706,162	+		Echvi_1487	0.76	-2.4
1,706,162	+		Echvi_1487	0.76	-1.4
1,706,163	-		Echvi_1487	0.76	-1.2
1,706,174	-		Echvi_1487	0.76	-2.4
1,706,182	+		Echvi_1487	0.77	-1.1
1,706,182	+		Echvi_1487	0.77	-0.5
1,706,183	-		Echvi_1487	0.77	-0.7
1,706,203	-		Echvi_1487	0.78	-2.5
1,706,203	-		Echvi_1487	0.78	-1.2
1,706,254	+		Echvi_1487	0.81	+0.2
1,706,254	+		Echvi_1487	0.81	-1.2
1,706,255	-		Echvi_1487	0.81	-0.8
1,706,277	+		Echvi_1487	0.83	-0.4
1,706,277	+		Echvi_1487	0.83	+0.3
1,706,284	-		Echvi_1487	0.83	-0.8
1,706,284	-		Echvi_1487	0.83	+0.2
1,706,309	+		Echvi_1487	0.84	-0.8
1,706,309	+		Echvi_1487	0.84	-1.9
1,706,310	-		Echvi_1487	0.85	-1.6
1,706,310	-		Echvi_1487	0.85	-1.3
1,706,310	-		Echvi_1487	0.85	-1.8
1,706,336	+		Echvi_1487	0.86	-0.9
1,706,338	+		Echvi_1487	0.86	-1.4
1,706,338	+		Echvi_1487	0.86	-1.1
1,706,338	+				+1.3
1,706,344	+		Echvi_1487	0.87	-2.0
1,706,345	-		Echvi_1487	0.87	-0.3
1,706,345	-		Echvi_1487	0.87	-1.5
1,706,345	-		Echvi_1487	0.87	-2.1
1,706,357	-		Echvi_1487	0.87	-1.8
1,706,360	+		Echvi_1487	0.87	+0.9
1,706,360	+		Echvi_1487	0.87	-2.4
1,706,360	+		Echvi_1487	0.87	-0.2
1,706,360	+		Echvi_1487	0.87	-1.9
1,706,361	-		Echvi_1487	0.88	-3.0
1,706,383	-		Echvi_1487	0.89	-0.7
1,706,412	+				-1.1
1,706,412	+				-1.7
1,706,413	-				-2.5
1,706,413	-				+0.0
1,706,413	-				-0.9
1,706,413	-				-0.6
1,706,418	-				-0.1
1,706,448	+				-3.1
1,706,449	-				-3.2
1,706,449	-				-1.4
1,706,449	-				-1.0
1,706,467	+				-1.1
1,706,467	+				-2.2
1,706,529	+				-0.6
1,706,571	+				-0.0
1,706,571	+				-0.3
1,706,654	+				-0.8
1,706,697	-		Echvi_1488	0.15	-0.1
1,706,697	-		Echvi_1488	0.15	-0.9
1,706,743	+		Echvi_1488	0.22	+0.1
1,706,866	+		Echvi_1488	0.41	-1.4
1,706,867	-		Echvi_1488	0.41	-1.8
1,706,867	-		Echvi_1488	0.41	+1.2
1,706,867	-		Echvi_1488	0.41	-0.3
1,706,867	-		Echvi_1488	0.41	+0.7
1,706,923	-		Echvi_1488	0.49	+0.8
1,706,931	-		Echvi_1488	0.50	+0.4
1,706,952	+		Echvi_1488	0.54	-0.9
1,706,952	+		Echvi_1488	0.54	-0.1
1,706,953	-		Echvi_1488	0.54	-1.5
1,706,953	-		Echvi_1488	0.54	+1.1
1,706,953	-		Echvi_1488	0.54	+0.2
1,706,953	-		Echvi_1488	0.54	-0.8
1,707,030	-		Echvi_1488	0.65	-1.1
1,707,036	+		Echvi_1488	0.66	-0.3
1,707,048	+		Echvi_1488	0.68	-0.3
1,707,048	+		Echvi_1488	0.68	+0.4
1,707,065	-		Echvi_1488	0.71	+0.3
1,707,093	+		Echvi_1488	0.75	-0.8
1,707,128	+		Echvi_1488	0.80	-0.3
1,707,162	+		Echvi_1488	0.85	+1.6
1,707,231	+				+0.7
1,707,235	-				+0.0
1,707,236	+				-2.9
1,707,236	+				-1.7
1,707,265	+				-0.7
1,707,266	-				+1.2
1,707,266	-				-0.4
1,707,268	+				-0.4
1,707,268	+				+0.2
1,707,268	+				+0.3
1,707,269	-				-1.1
1,707,269	-				-2.7
1,707,270	+				+0.5
1,707,270	+				-0.8
1,707,271	-				+2.0
1,707,271	-				+1.6
1,707,271	-				+0.2
1,707,349	-				+1.0
1,707,351	-				+1.7
1,707,388	+				-0.4
1,707,389	-				-0.1
1,707,389	-				+0.4
1,707,458	-				+0.3
1,707,473	+				-1.3
1,707,473	+				+0.3
1,707,473	+				+1.6
1,707,473	+				+0.7
1,707,474	-				+0.3
1,707,474	-				+0.5
1,707,477	-				-0.7
1,707,505	+				+0.7
1,707,506	-				-0.5
1,707,509	+				+1.5
1,707,509	+				+1.2
1,707,509	+				-0.5
1,707,510	-				+0.9
1,707,570	-				-1.2
1,707,570	-				+1.8
1,707,570	-				+0.1
1,707,570	-				-0.3