Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1431

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,643,730	-				-1.7
1,644,493	+				+0.8
1,644,494	-				-2.1
1,644,496	+				+0.2
1,644,496	+				-2.7
1,644,497	-				-2.4
1,644,501	+				+0.7
1,644,501	+				+0.1
1,644,501	+				+2.7
1,644,501	+				+0.9
1,644,502	-				+0.4
1,644,503	+				-0.8
1,644,540	-				-2.2
1,644,540	-				-3.1
1,644,540	-				-3.8
1,644,599	-				-2.2
1,644,604	-				-0.1
1,644,610	+				+0.7
1,644,611	-				-1.3
1,644,611	-				-1.7
1,644,857	-		Echvi_1431	0.20	-1.9
1,644,857	-		Echvi_1431	0.20	-0.5
1,644,857	-		Echvi_1431	0.20	+0.2
1,644,857	-		Echvi_1431	0.20	-2.1
1,644,861	-		Echvi_1431	0.21	-1.4
1,644,888	+		Echvi_1431	0.24	-1.1
1,644,888	+		Echvi_1431	0.24	-0.6
1,644,888	+		Echvi_1431	0.24	-2.0
1,644,889	-		Echvi_1431	0.24	-1.0
1,644,889	-		Echvi_1431	0.24	-1.2
1,644,894	+		Echvi_1431	0.25	-1.8
1,644,895	-		Echvi_1431	0.25	-2.3
1,644,895	-		Echvi_1431	0.25	-1.5
1,644,895	-		Echvi_1431	0.25	+0.3
1,644,924	-		Echvi_1431	0.29	-1.9
1,644,945	-		Echvi_1431	0.32	+0.0
1,644,968	+		Echvi_1431	0.35	-1.3
1,644,969	-		Echvi_1431	0.35	-0.8
1,644,969	-		Echvi_1431	0.35	+0.4
1,644,969	-		Echvi_1431	0.35	-1.5
1,645,013	+		Echvi_1431	0.40	-0.3
1,645,014	-		Echvi_1431	0.40	-1.6
1,645,050	+		Echvi_1431	0.45	-1.3
1,645,055	+		Echvi_1431	0.46	-0.1
1,645,056	-		Echvi_1431	0.46	-0.9
1,645,070	+		Echvi_1431	0.48	-1.3
1,645,071	-		Echvi_1431	0.48	-0.2
1,645,087	-		Echvi_1431	0.50	+0.4
1,645,088	+		Echvi_1431	0.50	+1.7
1,645,088	+		Echvi_1431	0.50	-0.1
1,645,089	-		Echvi_1431	0.50	+0.2
1,645,089	-		Echvi_1431	0.50	-0.6
1,645,280	-		Echvi_1431	0.75	-0.0
1,645,371	+		Echvi_1431	0.87	+0.6
1,645,371	+		Echvi_1431	0.87	-1.7
1,645,372	-		Echvi_1431	0.87	+0.2
1,645,372	-		Echvi_1431	0.87	+0.3
1,645,372	-		Echvi_1431	0.87	-4.0
1,645,372	-		Echvi_1431	0.87	-0.9
1,645,372	-		Echvi_1431	0.87	-3.0
1,645,374	+		Echvi_1431	0.87	-1.1
1,645,375	-		Echvi_1431	0.87	-2.2
1,645,404	+				+1.6
1,645,405	-				-0.3
1,645,426	+				+1.2
1,645,427	-				-0.0
1,645,427	-				+0.4
1,645,427	-				+0.1
1,645,444	+				-1.3
1,645,445	-				-1.4
1,645,456	-				+0.3
1,645,471	-				+3.3
1,645,480	+				-0.1
1,645,498	-				-0.5
1,645,500	+				-0.4
1,645,528	+				-1.3
1,645,529	-				-0.7
1,645,529	-				-0.1
1,645,580	+				+0.4
1,645,585	-				+0.0
1,645,585	-				-1.1
1,645,601	+				-0.8
1,645,654	+				-0.4
1,645,661	+				-1.8
1,645,666	-				+0.8
1,645,666	-				+0.5
1,645,709	+				-0.7
1,645,722	+				-0.3
1,645,771	+		Echvi_1432	0.14	-1.3
1,645,771	+		Echvi_1432	0.14	+0.2
1,645,772	-		Echvi_1432	0.14	+1.4
1,645,772	-		Echvi_1432	0.14	+0.1
1,645,772	-		Echvi_1432	0.14	-0.3
1,645,774	-		Echvi_1432	0.14	-0.6
1,645,787	+		Echvi_1432	0.16	-0.2
1,645,794	+		Echvi_1432	0.17	+0.3
1,645,831	-		Echvi_1432	0.21	-0.3
1,645,831	-		Echvi_1432	0.21	+0.6
1,645,870	-		Echvi_1432	0.26	+0.4
1,645,874	+		Echvi_1432	0.27	+0.5
1,645,874	+		Echvi_1432	0.27	+1.3
1,645,874	+		Echvi_1432	0.27	-0.7
1,645,875	-		Echvi_1432	0.27	-0.1
1,645,875	-		Echvi_1432	0.27	+1.2
1,645,900	+		Echvi_1432	0.30	+1.7
1,645,901	-		Echvi_1432	0.30	-1.0
1,645,901	-		Echvi_1432	0.30	-1.6
1,645,901	-		Echvi_1432	0.30	+0.3
1,646,018	+		Echvi_1432	0.45	-2.8
1,646,018	+		Echvi_1432	0.45	+1.0
1,646,037	-		Echvi_1432	0.48	-0.1
1,646,043	-		Echvi_1432	0.49	+0.2
1,646,075	-		Echvi_1432	0.53	-0.1
1,646,088	-		Echvi_1432	0.55	-0.2
1,646,153	+		Echvi_1432	0.63	-2.2
1,646,153	+		Echvi_1432	0.63	-1.4
1,646,154	-		Echvi_1432	0.63	-1.4
1,646,178	+		Echvi_1432	0.66	+0.2
1,646,264	+		Echvi_1432	0.77	-0.9
1,646,265	-		Echvi_1432	0.77	+0.3
1,646,271	-		Echvi_1432	0.78	-0.4
1,646,271	-		Echvi_1432	0.78	+0.9
1,646,328	+		Echvi_1432	0.86	-2.3
1,646,329	-		Echvi_1432	0.86	+0.3
1,646,351	+		Echvi_1432	0.89	+0.7
1,646,352	-		Echvi_1432	0.89	+1.5
1,646,352	-		Echvi_1432	0.89	-0.8
1,646,352	-		Echvi_1432	0.89	-0.0
1,646,365	-				+1.7
1,646,447	-				-0.3