Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1395

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,608,541	+		Echvi_1394	0.31	-0.5
1,608,557	+		Echvi_1394	0.33	-0.6
1,608,636	+		Echvi_1394	0.39	-0.2
1,608,637	-		Echvi_1394	0.39	-2.1
1,608,663	+		Echvi_1394	0.41	+0.8
1,608,664	-		Echvi_1394	0.41	+0.1
1,608,664	-		Echvi_1394	0.41	+0.8
1,608,664	-		Echvi_1394	0.41	-0.6
1,608,672	-		Echvi_1394	0.41	-0.9
1,608,679	-		Echvi_1394	0.42	-1.0
1,608,695	-		Echvi_1394	0.43	-0.7
1,608,857	-		Echvi_1394	0.55	+0.7
1,608,860	+		Echvi_1394	0.55	-0.9
1,608,860	+		Echvi_1394	0.55	-1.6
1,608,867	+		Echvi_1394	0.56	+0.2
1,608,868	-		Echvi_1394	0.56	-0.6
1,608,909	-		Echvi_1394	0.59	+0.0
1,608,913	-		Echvi_1394	0.59	-0.5
1,608,943	+		Echvi_1394	0.61	-0.8
1,608,944	-		Echvi_1394	0.61	-1.3
1,608,975	+		Echvi_1394	0.64	+0.3
1,608,975	+		Echvi_1394	0.64	+1.0
1,608,980	-		Echvi_1394	0.64	+0.7
1,609,131	-		Echvi_1394	0.75	+0.7
1,609,140	-		Echvi_1394	0.76	+0.3
1,609,140	-		Echvi_1394	0.76	-3.1
1,609,140	-		Echvi_1394	0.76	+2.0
1,609,140	-		Echvi_1394	0.76	+1.0
1,609,150	-		Echvi_1394	0.77	-0.4
1,609,158	+		Echvi_1394	0.77	-0.9
1,609,175	+		Echvi_1394	0.78	-0.5
1,609,176	-		Echvi_1394	0.79	-0.8
1,609,176	-		Echvi_1394	0.79	+0.1
1,609,176	-		Echvi_1394	0.79	+0.1
1,609,176	-		Echvi_1394	0.79	-1.1
1,609,187	-		Echvi_1394	0.79	+1.1
1,609,208	+		Echvi_1394	0.81	+0.2
1,609,257	+		Echvi_1394	0.85	+0.4
1,609,257	+		Echvi_1394	0.85	+0.6
1,609,257	+		Echvi_1394	0.85	+0.2
1,609,258	-		Echvi_1394	0.85	-0.4
1,609,308	-		Echvi_1394	0.88	+0.8
1,609,403	-				-0.5
1,609,408	+				+0.3
1,609,409	-				+0.7
1,609,409	-				-0.8
1,609,409	-				+0.0
1,609,409	-				+0.1
1,609,409	-				-1.0
1,609,409	-				-1.6
1,609,425	-				-0.4
1,609,465	+				-0.3
1,609,466	-				+0.6
1,609,467	+				+1.4
1,609,468	-				-1.5
1,609,468	-				-0.5
1,609,468	-				-0.9
1,609,468	-				+0.1
1,609,470	+				-1.1
1,609,470	+				+0.9
1,609,473	+				+1.9
1,609,473	+				-0.5
1,609,473	+				-0.3
1,609,473	+				-0.9
1,609,474	-				-0.9
1,609,474	-				-0.9
1,609,474	-				+0.7
1,609,474	-				-0.3
1,609,474	-				-0.3
1,609,474	-				-0.5
1,609,474	-				-0.2
1,609,475	+				-0.1
1,609,475	+				+0.3
1,609,477	+				-0.2
1,609,477	+				-0.3
1,609,477	+				+2.2
1,609,477	+				-0.3
1,609,477	+				+1.7
1,609,477	+				-0.2
1,609,481	+				+0.6
1,609,481	+				+0.3
1,609,481	+				-0.9
1,609,481	+				-0.8
1,609,482	-				+0.1
1,609,483	+				+1.1
1,609,484	-				-0.1
1,609,484	-				+0.4
1,609,516	+				+0.0
1,609,516	+				-0.3
1,609,516	+				-0.5
1,609,518	+				-1.3
1,609,562	+				+0.7
1,609,562	+				+0.9
1,609,648	+		Echvi_1395	0.15	-1.0
1,609,648	+		Echvi_1395	0.15	-1.9
1,609,648	+		Echvi_1395	0.15	-0.5
1,609,648	+		Echvi_1395	0.15	-0.3
1,609,648	+		Echvi_1395	0.15	+0.2
1,609,648	+		Echvi_1395	0.15	+0.2
1,609,649	-		Echvi_1395	0.16	+0.3
1,609,649	-		Echvi_1395	0.16	-1.5
1,609,649	-		Echvi_1395	0.16	-3.7
1,609,668	+		Echvi_1395	0.18	+0.9
1,609,668	+		Echvi_1395	0.18	-0.1
1,609,668	+		Echvi_1395	0.18	+0.4
1,609,668	+		Echvi_1395	0.18	+0.3
1,609,669	-		Echvi_1395	0.18	+1.6
1,609,669	-		Echvi_1395	0.18	-0.0
1,609,669	-		Echvi_1395	0.18	-0.2
1,609,669	-		Echvi_1395	0.18	+1.9
1,609,756	+		Echvi_1395	0.30	-0.1
1,609,808	+		Echvi_1395	0.37	+0.9
1,609,808	+		Echvi_1395	0.37	-2.5
1,609,809	-		Echvi_1395	0.38	-1.1
1,609,810	+		Echvi_1395	0.38	-1.0
1,609,810	+		Echvi_1395	0.38	+0.9
1,609,810	+		Echvi_1395	0.38	+0.3
1,609,810	+		Echvi_1395	0.38	+1.0
1,609,810	+		Echvi_1395	0.38	+2.6
1,609,810	+		Echvi_1395	0.38	-1.4
1,609,810	+		Echvi_1395	0.38	-0.3
1,609,811	-		Echvi_1395	0.38	+0.3
1,610,019	-		Echvi_1395	0.67	+0.3
1,610,019	-		Echvi_1395	0.67	+0.1
1,610,108	+		Echvi_1395	0.79	+0.7
1,610,109	-		Echvi_1395	0.79	+0.1
1,610,110	+		Echvi_1395	0.79	+0.5
1,610,110	+		Echvi_1395	0.79	-1.0
1,610,110	+		Echvi_1395	0.79	+0.1
1,610,111	-		Echvi_1395	0.79	-1.5
1,610,111	-		Echvi_1395	0.79	-3.5
1,610,111	-		Echvi_1395	0.79	-0.6
1,610,111	-		Echvi_1395	0.79	-0.9
1,610,135	+		Echvi_1395	0.83	-1.1
1,610,136	-		Echvi_1395	0.83	+0.6
1,610,282	-				-2.2
1,610,285	+				+0.4
1,610,285	+				+0.6
1,610,285	+				-1.5
1,610,286	-				-1.9
1,610,288	+				-0.1
1,610,300	+				-0.5
1,610,307	-				+0.3
1,610,397	+				-1.1
1,610,484	+		Echvi_1396	0.10	+1.0
1,610,517	-		Echvi_1396	0.13	-0.8
1,610,665	+		Echvi_1396	0.24	+0.6
1,610,684	-		Echvi_1396	0.26	+0.5
1,610,708	+		Echvi_1396	0.28	-0.3
1,610,709	-		Echvi_1396	0.28	+0.1
1,610,709	-		Echvi_1396	0.28	-1.1
1,610,710	+		Echvi_1396	0.28	+0.9
1,610,710	+		Echvi_1396	0.28	-1.1
1,610,714	+		Echvi_1396	0.28	-0.4
1,610,715	-		Echvi_1396	0.28	+1.0
1,610,715	-		Echvi_1396	0.28	-0.1
1,610,736	+		Echvi_1396	0.30	-0.4
1,610,768	+		Echvi_1396	0.32	-0.4
1,610,768	+		Echvi_1396	0.32	+0.0
1,610,768	+		Echvi_1396	0.32	+1.7
1,610,769	-		Echvi_1396	0.33	-1.6
1,610,769	-		Echvi_1396	0.33	+1.1
1,610,769	-				+0.7
1,610,770	+		Echvi_1396	0.33	+0.3
1,610,770	+		Echvi_1396	0.33	-0.4
1,610,770	+		Echvi_1396	0.33	-0.8
1,610,812	+		Echvi_1396	0.36	+0.7
1,610,813	-		Echvi_1396	0.36	+0.4
1,610,834	-		Echvi_1396	0.38	-2.2
1,610,846	+		Echvi_1396	0.39	-1.2
1,611,080	+		Echvi_1396	0.57	-0.3
1,611,167	+		Echvi_1396	0.64	+1.6
1,611,179	+		Echvi_1396	0.64	-0.2
1,611,179	+		Echvi_1396	0.64	-0.5
1,611,184	-		Echvi_1396	0.65	+0.8
1,611,210	-		Echvi_1396	0.67	-0.9
1,611,224	-		Echvi_1396	0.68	-0.1
1,611,224	-		Echvi_1396	0.68	-0.2
1,611,224	-		Echvi_1396	0.68	-2.2