Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1268

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,453,211	+		Echvi_1267	0.76	-0.3
1,453,340	-		Echvi_1267	0.84	-2.9
1,453,356	+		Echvi_1267	0.85	-0.9
1,453,356	+		Echvi_1267	0.85	-1.2
1,453,379	+		Echvi_1267	0.86	+0.1
1,453,379	+		Echvi_1267	0.86	-0.6
1,453,379	+		Echvi_1267	0.86	+0.8
1,453,380	-		Echvi_1267	0.86	-0.5
1,453,380	-		Echvi_1267	0.86	+0.0
1,453,380	-		Echvi_1267	0.86	-0.1
1,453,380	-		Echvi_1267	0.86	-0.3
1,453,382	-		Echvi_1267	0.86	-0.4
1,453,483	+				+0.5
1,453,483	+				-0.9
1,453,484	-				+1.0
1,453,484	-				-0.8
1,453,484	-				+1.1
1,453,485	+				+0.8
1,453,573	+				-0.1
1,453,573	+				+0.3
1,453,574	-				+0.6
1,453,633	+				+0.1
1,453,634	-				-0.1
1,453,651	-				+2.8
1,453,698	-				-0.9
1,453,728	-				+3.5
1,453,796	-				+0.7
1,453,814	-				+0.1
1,453,816	-				-3.0
1,453,860	-				-0.7
1,453,865	-				+1.7
1,453,879	-				-1.1
1,453,879	-				+0.5
1,453,884	-				+1.1
1,453,926	-				-2.1
1,453,926	-				-2.1
1,453,933	+				+0.7
1,453,939	+				-0.3
1,454,025	+				+0.1
1,454,047	-				-1.7
1,454,057	+				-0.3
1,454,058	-				-1.6
1,454,058	-				-0.6
1,454,061	-				+1.7
1,454,070	+				-1.9
1,454,070	+				+0.3
1,454,078	+				-0.1
1,454,083	-				-0.7
1,454,096	+				-0.7
1,454,131	-				-0.9
1,454,374	-		Echvi_1268	0.15	-0.6
1,454,385	+		Echvi_1268	0.16	-2.1
1,454,386	-		Echvi_1268	0.16	+0.4
1,454,431	+		Echvi_1268	0.18	+0.0
1,454,432	-		Echvi_1268	0.18	-2.4
1,454,457	+		Echvi_1268	0.19	+1.4
1,454,459	+		Echvi_1268	0.20	-0.5
1,454,460	-		Echvi_1268	0.20	-0.5
1,454,483	+		Echvi_1268	0.21	-1.6
1,454,486	-		Echvi_1268	0.21	-1.5
1,454,597	+		Echvi_1268	0.27	-0.8
1,454,597	+		Echvi_1268	0.27	-0.4
1,454,598	-		Echvi_1268	0.27	+0.7
1,454,826	+		Echvi_1268	0.39	-0.3
1,454,880	+		Echvi_1268	0.42	-0.4
1,454,880	+		Echvi_1268	0.42	-0.2
1,454,880	+		Echvi_1268	0.42	+0.0
1,454,880	+		Echvi_1268	0.42	-1.1
1,454,880	+		Echvi_1268	0.42	-1.6
1,454,880	+		Echvi_1268	0.42	-0.5
1,454,881	-		Echvi_1268	0.42	-0.6
1,454,881	-		Echvi_1268	0.42	-0.1
1,454,882	+		Echvi_1268	0.42	-0.4
1,454,883	-		Echvi_1268	0.42	-0.2
1,454,883	-		Echvi_1268	0.42	-0.5
1,454,901	-		Echvi_1268	0.43	-0.3
1,454,923	-		Echvi_1268	0.44	-1.6
1,454,940	+		Echvi_1268	0.45	-2.1
1,454,940	+		Echvi_1268	0.45	-2.0
1,454,941	-		Echvi_1268	0.45	+1.2
1,454,941	-		Echvi_1268	0.45	-1.7
1,454,941	-		Echvi_1268	0.45	-0.0
1,454,957	+		Echvi_1268	0.46	-1.3
1,454,957	+		Echvi_1268	0.46	+0.1
1,454,970	-		Echvi_1268	0.46	+0.3
1,454,982	+		Echvi_1268	0.47	-0.5
1,454,982	+		Echvi_1268	0.47	-1.6
1,454,983	-		Echvi_1268	0.47	-2.6
1,454,983	-		Echvi_1268	0.47	+0.5
1,455,020	+		Echvi_1268	0.49	+0.4
1,455,020	+		Echvi_1268	0.49	-0.0
1,455,021	-		Echvi_1268	0.49	-0.3
1,455,021	-		Echvi_1268	0.49	+0.4
1,455,037	+		Echvi_1268	0.50	-2.0
1,455,041	+		Echvi_1268	0.50	-1.3
1,455,041	+		Echvi_1268	0.50	-0.3
1,455,041	+		Echvi_1268	0.50	+0.2
1,455,041	+		Echvi_1268	0.50	+1.7
1,455,042	-		Echvi_1268	0.50	+0.3
1,455,042	-		Echvi_1268	0.50	-0.6
1,455,042	-		Echvi_1268	0.50	-2.3
1,455,042	-		Echvi_1268	0.50	-0.7
1,455,046	-		Echvi_1268	0.50	-1.2
1,455,046	-		Echvi_1268	0.50	-1.0
1,455,084	+		Echvi_1268	0.52	-0.6
1,455,084	+		Echvi_1268	0.52	-0.2
1,455,084	+		Echvi_1268	0.52	+1.0
1,455,100	+		Echvi_1268	0.53	-1.8
1,455,104	+		Echvi_1268	0.54	-2.3
1,455,105	-		Echvi_1268	0.54	-2.5
1,455,121	+		Echvi_1268	0.54	+1.1
1,455,121	+		Echvi_1268	0.54	+0.7
1,455,121	+		Echvi_1268	0.54	-0.7
1,455,122	-		Echvi_1268	0.54	-0.9
1,455,122	-		Echvi_1268	0.54	-1.9
1,455,122	-		Echvi_1268	0.54	-1.6
1,455,122	-		Echvi_1268	0.54	-0.1
1,455,163	-		Echvi_1268	0.57	+0.5
1,455,163	-		Echvi_1268	0.57	-1.5
1,455,164	+		Echvi_1268	0.57	-0.1
1,455,164	+		Echvi_1268	0.57	-2.0
1,455,165	-		Echvi_1268	0.57	+0.7
1,455,231	+		Echvi_1268	0.60	-2.3
1,455,232	-		Echvi_1268	0.60	+0.4
1,455,232	-		Echvi_1268	0.60	+0.7
1,455,237	-		Echvi_1268	0.61	-0.6
1,455,237	-		Echvi_1268	0.61	+1.1
1,455,237	-		Echvi_1268	0.61	-1.1
1,455,237	-		Echvi_1268	0.61	+1.4
1,455,273	-		Echvi_1268	0.62	-1.5
1,455,336	-		Echvi_1268	0.66	+1.1
1,455,441	-		Echvi_1268	0.71	-0.8
1,455,474	+		Echvi_1268	0.73	-2.0
1,455,474	+		Echvi_1268	0.73	-0.3
1,455,474	+		Echvi_1268	0.73	-2.1
1,455,474	+		Echvi_1268	0.73	-1.2
1,455,474	+		Echvi_1268	0.73	-0.6
1,455,475	-		Echvi_1268	0.73	-0.2
1,455,528	+		Echvi_1268	0.76	-2.6
1,455,529	-		Echvi_1268	0.76	+0.1
1,455,529	-		Echvi_1268	0.76	-0.3
1,455,567	+		Echvi_1268	0.78	-1.7
1,455,568	-		Echvi_1268	0.78	-2.3
1,455,570	+		Echvi_1268	0.78	-2.1
1,455,720	+		Echvi_1268	0.86	+0.9
1,455,720	+		Echvi_1268	0.86	-2.4
1,455,720	+		Echvi_1268	0.86	-0.0
1,455,720	+		Echvi_1268	0.86	-0.7
1,455,720	+		Echvi_1268	0.86	-0.1
1,455,720	+		Echvi_1268	0.86	+0.1
1,455,720	+		Echvi_1268	0.86	-1.2
1,455,721	-		Echvi_1268	0.86	+2.3
1,455,721	-		Echvi_1268	0.86	-0.4
1,455,721	-		Echvi_1268	0.86	+0.7
1,455,721	-		Echvi_1268	0.86	-1.0
1,455,721	-		Echvi_1268	0.86	-2.2
1,455,721	-		Echvi_1268	0.86	-0.6
1,455,721	-		Echvi_1268	0.86	-0.1
1,455,726	+		Echvi_1268	0.86	-0.9
1,455,726	+		Echvi_1268	0.86	+0.6
1,455,727	-		Echvi_1268	0.86	+1.5
1,455,727	-		Echvi_1268	0.86	+1.0
1,455,727	-		Echvi_1268	0.86	-1.5
1,455,727	-		Echvi_1268	0.86	-1.6
1,455,785	+		Echvi_1268	0.89	+2.2
1,455,791	+		Echvi_1268	0.90	+0.1
1,455,792	-		Echvi_1268	0.90	+0.1
1,455,792	-		Echvi_1268	0.90	-0.7
1,455,824	+				-2.4
1,455,881	+				-1.2
1,455,896	-				-0.1
1,455,926	+				-1.6
1,455,927	-				-0.0
1,455,927	-				-0.3
1,456,102	+				-1.3
1,456,102	+				+0.3
1,456,103	-				+0.2
1,456,201	+				-0.3
1,456,201	+				-1.6
1,456,201	+				-0.7
1,456,202	-				-1.1
1,456,207	-				+0.2
1,456,232	+				+1.1
1,456,233	-				-1.4
1,456,245	+				+0.0
1,456,309	+				+0.8
1,456,309	+				+0.2
1,456,400	+				+0.1
1,456,400	+				-0.7
1,456,401	-				+0.0
1,456,401	-				+0.9
1,456,401	-				-1.5
1,456,403	+				+1.1
1,456,404	-				+0.0
1,456,404	-				-1.0
1,456,405	+				-0.9
1,456,418	+				+1.0
1,456,577	+		Echvi_1269	0.15	-1.2
1,456,577	+		Echvi_1269	0.15	-0.2
1,456,577	+		Echvi_1269	0.15	-1.3
1,456,577	+		Echvi_1269	0.15	+1.3
1,456,578	-		Echvi_1269	0.15	+0.8
1,456,578	-		Echvi_1269	0.15	+1.0
1,456,578	-		Echvi_1269	0.15	-0.4
1,456,578	-		Echvi_1269	0.15	-0.9
1,456,616	+		Echvi_1269	0.17	-0.3
1,456,636	-		Echvi_1269	0.18	-1.4
1,456,676	+		Echvi_1269	0.20	+0.6
1,456,714	-		Echvi_1269	0.22	+0.8
1,456,714	-		Echvi_1269	0.22	+0.4
1,456,978	+		Echvi_1269	0.35	+0.3
1,456,978	+		Echvi_1269	0.35	-1.5
1,456,979	-		Echvi_1269	0.35	-0.5