Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1178

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,354,071	+		Echvi_1176	0.23	+1.3
1,354,071	+		Echvi_1176	0.23	-2.0
1,354,072	-		Echvi_1176	0.23	-2.1
1,354,072	-		Echvi_1176	0.23	-2.3
1,354,110	+		Echvi_1176	0.28	-1.1
1,354,110	+		Echvi_1176	0.28	-1.3
1,354,110	+		Echvi_1176	0.28	-0.8
1,354,110	+		Echvi_1176	0.28	-1.1
1,354,110	+		Echvi_1176	0.28	+0.3
1,354,110	+		Echvi_1176	0.28	-0.1
1,354,111	-		Echvi_1176	0.28	-0.6
1,354,111	-		Echvi_1176	0.28	-0.6
1,354,111	-		Echvi_1176	0.28	-2.9
1,354,113	-		Echvi_1176	0.28	-2.3
1,354,113	-		Echvi_1176	0.28	+0.2
1,354,367	-		Echvi_1176	0.60	+0.0
1,354,371	-		Echvi_1176	0.61	-1.2
1,354,402	-		Echvi_1176	0.65	-1.1
1,354,402	-		Echvi_1176	0.65	-0.5
1,354,402	-		Echvi_1176	0.65	-0.9
1,354,467	+		Echvi_1176	0.73	+1.1
1,354,554	+		Echvi_1176	0.84	-0.7
1,354,554	+		Echvi_1176	0.84	-0.1
1,354,554	+		Echvi_1176	0.84	+1.1
1,354,555	-		Echvi_1176	0.84	-2.0
1,354,555	-		Echvi_1176	0.84	-0.5
1,354,555	-		Echvi_1176	0.84	+0.7
1,354,555	-		Echvi_1176	0.84	-1.0
1,354,555	-		Echvi_1176	0.84	-1.9
1,354,614	+				-0.1
1,354,615	-				+0.3
1,354,615	-				-0.5
1,354,615	-				+0.7
1,354,653	+				+1.1
1,354,653	+				-2.4
1,354,685	+				-0.3
1,354,686	-				+0.0
1,354,686	-				-0.3
1,354,686	-				-1.1
1,354,701	-				-1.0
1,354,728	+				+1.3
1,354,729	-				+1.9
1,354,987	+				+0.3
1,354,987	+				+0.7
1,355,035	+				+0.1
1,355,035	+				-2.4
1,355,035	+				-1.0
1,355,035	+				-1.1
1,355,035	+				+1.4
1,355,046	+				+0.0
1,356,467	+				-0.9
1,356,468	-				-1.1
1,356,535	-				+0.7
1,356,540	-				-2.1
1,356,562	-				+0.7
1,356,575	+				-1.1
1,356,594	-				-3.1
1,356,594	-				-1.1
1,356,594	-				-1.6