Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1152

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,318,680	+		Echvi_1150	0.77	+0.8
1,318,857	+				+0.1
1,318,857	+				+0.5
1,318,858	-				-0.0
1,318,893	-				+1.7
1,319,410	-				+0.1
1,319,422	-				+0.9
1,319,422	-				-0.3
1,319,461	-				+2.6
1,319,527	+				-0.7
1,319,527	+				-0.1
1,319,528	-				+0.2
1,319,538	-				-0.4
1,319,542	+				-0.9
1,319,543	-				-1.5
1,319,543	-				-0.2
1,319,546	+				-1.3
1,319,546	+				-2.5
1,319,546	+				+0.4
1,319,546	+				-0.8
1,319,546	+				+0.7
1,319,547	-				-1.6
1,319,547	-				+0.5
1,319,547	-				-1.7
1,319,555	+				-1.5
1,319,555	+				+1.1
1,319,559	+				-0.5
1,319,561	+				-1.9
1,319,591	-				-1.5
1,319,591	-				+0.7
1,319,596	+				+2.5
1,319,651	+				-0.6
1,319,676	+				+0.1
1,319,680	+				-0.9
1,319,680	+				-0.2
1,319,706	+				-1.8
1,319,885	+		Echvi_1152	0.19	-2.0
1,319,885	+		Echvi_1152	0.19	-0.1
1,319,886	-		Echvi_1152	0.19	-1.4
1,319,968	-		Echvi_1152	0.26	-1.3
1,319,968	-		Echvi_1152	0.26	-1.1
1,319,973	+		Echvi_1152	0.26	-1.6
1,319,981	+		Echvi_1152	0.27	-2.0
1,320,310	+		Echvi_1152	0.53	+0.6
1,320,310	+		Echvi_1152	0.53	-0.3
1,320,324	+		Echvi_1152	0.54	-0.3
1,320,325	-		Echvi_1152	0.54	-2.3
1,320,475	+		Echvi_1152	0.66	+0.1
1,320,475	+		Echvi_1152	0.66	-1.5
1,320,556	+		Echvi_1152	0.72	-1.0
1,320,557	-		Echvi_1152	0.72	-1.4
1,320,557	-		Echvi_1152	0.72	-1.5
1,320,557	-		Echvi_1152	0.72	-0.7
1,320,557	-		Echvi_1152	0.72	-1.0
1,320,622	+		Echvi_1152	0.77	-2.2
1,320,623	-		Echvi_1152	0.77	-0.9
1,320,623	-		Echvi_1152	0.77	-1.7
1,320,667	+		Echvi_1152	0.81	-0.9
1,320,668	-		Echvi_1152	0.81	-2.0
1,320,668	-		Echvi_1152	0.81	+1.4
1,320,705	-		Echvi_1152	0.84	-0.9
1,320,736	+		Echvi_1152	0.86	+0.1
1,320,767	-		Echvi_1152	0.89	-0.1
1,320,767	-		Echvi_1152	0.89	-0.9
1,320,838	+				-1.1
1,320,838	+				-1.7
1,320,838	+				-0.6
1,320,849	-				-0.5
1,320,858	-				-0.3
1,320,858	-				-0.7
1,320,905	+				+1.4
1,320,905	+				-0.3
1,320,905	+				-0.1
1,320,922	-				+1.2
1,320,922	-				+1.1
1,320,923	+				-0.2
1,320,924	-				+0.5
1,320,924	-				-1.1
1,320,924	-				+0.1
1,320,924	-				+0.4
1,320,924	-				-2.7
1,321,006	-				+1.7
1,321,044	+				-0.9
1,321,047	+				-0.1
1,321,047	+				+0.7
1,321,047	+				+0.8
1,321,048	-				+0.3
1,321,101	+				-0.7
1,321,101	+				+0.7
1,321,102	-				-0.1
1,321,161	+		Echvi_1153	0.11	+0.6
1,321,161	+		Echvi_1153	0.11	+0.6
1,321,162	-		Echvi_1153	0.11	+0.2
1,321,179	-		Echvi_1153	0.13	+0.7
1,321,179	-		Echvi_1153	0.13	-0.3
1,321,238	-		Echvi_1153	0.17	-1.8
1,321,447	+		Echvi_1153	0.32	+0.8
1,321,447	+		Echvi_1153	0.32	-0.3
1,321,447	+		Echvi_1153	0.32	+0.6
1,321,448	-		Echvi_1153	0.32	-0.6
1,321,448	-		Echvi_1153	0.32	-1.5
1,321,582	+		Echvi_1153	0.41	+0.3
1,321,583	-		Echvi_1153	0.41	-0.8
1,321,632	-		Echvi_1153	0.45	-0.9
1,321,642	-		Echvi_1153	0.46	-1.2
1,321,711	-		Echvi_1153	0.51	-0.5