Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1148

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,314,703	+				+3.5
1,314,703	+				+1.8
1,314,737	-				+3.9
1,314,737	-				+4.0
1,314,774	-				-0.7
1,314,774	-				+0.1
1,314,774	-				-1.7
1,314,780	+				+0.3
1,314,780	+				+1.2
1,314,781	-				-0.8
1,314,802	-				-2.2
1,314,820	-				-0.9
1,314,820	-				-1.3
1,315,616	-				+0.1
1,315,616	-				+0.0
1,315,616	-				+3.7
1,315,628	-				-0.4
1,315,628	-				+1.7
1,315,629	+				-0.3
1,315,661	-				-2.6
1,315,661	-				-1.4
1,315,661	-				+1.9
1,315,661	-				+0.9
1,315,661	-				-0.2
1,315,661	-				+1.0
1,315,661	-				+1.0
1,315,701	+				-0.7
1,315,701	+				-1.5
1,315,702	-				+1.2
1,315,744	-				+1.7
1,315,744	-				+1.1
1,315,765	+				+0.7
1,315,766	-				+0.3
1,315,766	-				+1.8
1,315,769	+		Echvi_1148	0.10	-1.8
1,315,779	+		Echvi_1148	0.11	+1.2
1,315,779	+		Echvi_1148	0.11	+0.7
1,315,782	-		Echvi_1148	0.11	-0.1
1,315,791	+		Echvi_1148	0.12	-0.4
1,315,804	+		Echvi_1148	0.13	+0.5
1,315,805	-		Echvi_1148	0.13	-1.1
1,315,805	-		Echvi_1148	0.13	-1.2
1,315,805	-		Echvi_1148	0.13	-0.8
1,315,806	+		Echvi_1148	0.13	-0.4
1,315,806	+		Echvi_1148	0.13	+1.7
1,315,806	+		Echvi_1148	0.13	+0.3
1,315,806	+		Echvi_1148	0.13	-2.3
1,315,807	-		Echvi_1148	0.13	-1.8
1,315,807	-		Echvi_1148	0.13	-2.7
1,315,807	-		Echvi_1148	0.13	+1.2
1,315,903	-		Echvi_1148	0.20	-0.3
1,315,906	+		Echvi_1148	0.20	-1.9
1,315,906	+		Echvi_1148	0.20	-1.3
1,315,906	+		Echvi_1148	0.20	-0.5
1,315,907	-		Echvi_1148	0.20	-1.7
1,315,907	-		Echvi_1148	0.20	+0.0
1,315,907	-		Echvi_1148	0.20	-0.7
1,315,907	-		Echvi_1148	0.20	-1.3
1,315,907	-		Echvi_1148	0.20	+0.1
1,315,907	-		Echvi_1148	0.20	-1.5
1,315,907	-		Echvi_1148	0.20	-0.6
1,315,938	-		Echvi_1148	0.22	-1.7
1,315,938	-		Echvi_1148	0.22	-1.2
1,315,938	-		Echvi_1148	0.22	-3.7
1,315,948	+		Echvi_1148	0.23	-1.7
1,315,948	+		Echvi_1148	0.23	-1.5
1,315,985	-		Echvi_1148	0.26	-0.3
1,315,985	-		Echvi_1148	0.26	-2.2
1,316,037	+		Echvi_1148	0.29	-0.8
1,316,038	-		Echvi_1148	0.29	+0.2
1,316,038	-		Echvi_1148	0.29	-0.3
1,316,090	+		Echvi_1148	0.33	-0.8
1,316,090	+		Echvi_1148	0.33	-1.7
1,316,090	+		Echvi_1148	0.33	-0.6
1,316,090	+		Echvi_1148	0.33	-0.1
1,316,090	+		Echvi_1148	0.33	-2.0
1,316,090	+		Echvi_1148	0.33	-0.2
1,316,090	+		Echvi_1148	0.33	-0.7
1,316,091	-		Echvi_1148	0.33	-1.8
1,316,091	-		Echvi_1148	0.33	-0.9
1,316,091	-		Echvi_1148	0.33	-0.7
1,316,091	-		Echvi_1148	0.33	-0.9
1,316,122	+		Echvi_1148	0.35	+0.5
1,316,122	+		Echvi_1148	0.35	-0.5
1,316,155	+		Echvi_1148	0.38	-0.6
1,316,155	+		Echvi_1148	0.38	-1.6
1,316,156	-		Echvi_1148	0.38	-0.4
1,316,159	+		Echvi_1148	0.38	-1.0
1,316,160	-		Echvi_1148	0.38	-0.1
1,316,255	-		Echvi_1148	0.45	+0.7
1,316,314	+		Echvi_1148	0.49	-1.1
1,316,314	+		Echvi_1148	0.49	+0.2
1,316,350	+		Echvi_1148	0.51	+1.7
1,316,351	-		Echvi_1148	0.52	-2.3
1,316,356	+		Echvi_1148	0.52	+1.1
1,316,394	-		Echvi_1148	0.55	-1.6
1,316,396	-		Echvi_1148	0.55	-1.0
1,316,396	-		Echvi_1148	0.55	-0.2
1,316,413	+		Echvi_1148	0.56	+0.3
1,316,432	-		Echvi_1148	0.57	-1.3
1,316,459	-		Echvi_1148	0.59	+0.2
1,316,559	-		Echvi_1148	0.66	-1.9
1,316,633	+		Echvi_1148	0.72	+0.9
1,316,736	-		Echvi_1148	0.79	-1.4
1,316,736	-		Echvi_1148	0.79	-1.2
1,316,815	+		Echvi_1148	0.85	-0.4
1,316,815	+		Echvi_1148	0.85	-0.9
1,316,816	-		Echvi_1148	0.85	+0.7
1,316,816	-		Echvi_1148	0.85	+0.2
1,316,833	-		Echvi_1148	0.86	-0.8
1,316,864	+		Echvi_1148	0.88	-1.3
1,316,864	+		Echvi_1148	0.88	-1.0
1,316,919	-				-1.3
1,316,964	+				-1.9
1,316,985	+				-0.3
1,316,985	+				-2.6
1,317,052	+				+1.1
1,317,057	+				-1.9
1,317,058	-				+0.6
1,317,058	-				-0.2
1,317,058	-				+0.7
1,317,071	-				-0.1
1,317,093	-				-0.8
1,317,125	+				+0.1
1,317,126	-				+0.1
1,317,126	-				-0.6
1,317,215	-				-1.1
1,317,215	-				-0.4
1,317,325	+		Echvi_1149	0.18	+0.7
1,317,325	+		Echvi_1149	0.18	+1.0
1,317,326	-		Echvi_1149	0.18	+1.7
1,317,475	+		Echvi_1149	0.33	+0.2
1,317,515	+		Echvi_1149	0.38	-0.0
1,317,516	-		Echvi_1149	0.38	-0.9
1,317,531	+		Echvi_1149	0.39	+0.9
1,317,531	+		Echvi_1149	0.39	-0.0
1,317,555	+		Echvi_1149	0.42	+0.4
1,317,555	+		Echvi_1149	0.42	-0.3
1,317,556	-		Echvi_1149	0.42	-0.6
1,317,556	-		Echvi_1149	0.42	+2.7
1,317,556	-		Echvi_1149	0.42	+1.1
1,317,556	-		Echvi_1149	0.42	+0.4
1,317,556	-		Echvi_1149	0.42	+1.4
1,317,556	-		Echvi_1149	0.42	+0.6
1,317,624	-		Echvi_1149	0.49	-0.8
1,317,645	-		Echvi_1149	0.51	-0.3
1,317,645	-		Echvi_1149	0.51	+1.5
1,317,676	-		Echvi_1149	0.54	-1.1
1,317,691	-		Echvi_1149	0.56	-1.3
1,317,697	+		Echvi_1149	0.56	-0.1
1,317,721	+		Echvi_1149	0.59	+2.1
1,317,722	-		Echvi_1149	0.59	-2.2
1,317,786	-		Echvi_1149	0.66	+0.4
1,317,786	-		Echvi_1149	0.66	+0.2
1,317,786	-		Echvi_1149	0.66	+0.6
1,317,786	-		Echvi_1149	0.66	+0.8
1,317,843	+		Echvi_1149	0.72	+0.3
1,317,843	+		Echvi_1149	0.72	-0.8
1,317,843	+		Echvi_1149	0.72	+0.2
1,317,843	+		Echvi_1149	0.72	-0.9
1,317,843	+		Echvi_1149	0.72	+0.4
1,317,843	+		Echvi_1149	0.72	-0.8
1,317,949	-		Echvi_1149	0.83	+1.1
1,317,958	+		Echvi_1149	0.84	+0.5
1,317,958	+		Echvi_1149	0.84	+1.0
1,317,959	-		Echvi_1149	0.84	+0.1
1,318,010	-		Echvi_1149	0.89	+0.9
1,318,010	-		Echvi_1149	0.89	-0.2