Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1131

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
1,293,068	-		Echvi_1130	0.53	-1.9
1,293,073	+		Echvi_1130	0.53	-0.7
1,293,169	+		Echvi_1130	0.60	-1.8
1,293,221	+		Echvi_1130	0.64	-0.2
1,293,233	-		Echvi_1130	0.65	-1.0
1,293,233	-		Echvi_1130	0.65	-0.5
1,293,258	+		Echvi_1130	0.67	+0.7
1,293,258	+		Echvi_1130	0.67	-0.5
1,293,259	-		Echvi_1130	0.67	-0.1
1,293,259	-		Echvi_1130	0.67	-1.9
1,293,259	-		Echvi_1130	0.67	-1.1
1,293,259	-		Echvi_1130	0.67	-1.1
1,293,261	+		Echvi_1130	0.67	+1.1
1,293,262	-		Echvi_1130	0.67	+2.0
1,293,356	-		Echvi_1130	0.74	-0.6
1,293,361	-		Echvi_1130	0.75	-2.4
1,293,361	-		Echvi_1130	0.75	-0.3
1,293,410	-		Echvi_1130	0.78	-1.5
1,293,452	+		Echvi_1130	0.82	-0.3
1,293,453	-		Echvi_1130	0.82	-0.1
1,293,501	+		Echvi_1130	0.85	-0.1
1,293,502	-		Echvi_1130	0.85	+1.0
1,293,502	-		Echvi_1130	0.85	-1.2
1,293,515	-		Echvi_1130	0.86	+2.1
1,293,708	-				-0.4
1,293,711	+				-1.1
1,293,719	-				-0.6
1,293,719	-				-0.3
1,293,831	-				-0.6
1,293,849	+				+1.5
1,293,867	-				+0.3
1,293,892	+				-0.3
1,293,893	-				-0.1
1,293,896	-				-2.5
1,293,971	-				-2.1
1,293,974	-				-1.3
1,293,995	+				+0.7
1,293,996	-				-1.1
1,294,051	-				+0.1
1,294,051	-				+1.5
1,294,051	-				-2.1
1,294,137	+		Echvi_1131	0.10	+1.0
1,294,158	+		Echvi_1131	0.14	+3.1
1,294,267	+		Echvi_1131	0.30	+1.6
1,294,267	+		Echvi_1131	0.30	+0.9
1,294,268	-		Echvi_1131	0.30	-0.2
1,294,268	-		Echvi_1131	0.30	-1.1
1,294,282	-		Echvi_1131	0.32	+0.4
1,294,282	-		Echvi_1131	0.32	-3.7
1,294,292	+		Echvi_1131	0.33	+2.5
1,294,328	-		Echvi_1131	0.39	-1.1
1,294,386	+		Echvi_1131	0.47	+0.2
1,294,423	+		Echvi_1131	0.53	+2.0
1,294,424	-		Echvi_1131	0.53	+1.0
1,294,433	-		Echvi_1131	0.54	-0.1
1,294,459	+		Echvi_1131	0.58	+1.7
1,294,459	+		Echvi_1131	0.58	+1.6
1,294,460	-		Echvi_1131	0.58	-0.6
1,294,462	+		Echvi_1131	0.59	+1.8
1,294,462	+		Echvi_1131	0.59	+1.7
1,294,462	+		Echvi_1131	0.59	+0.9
1,294,490	-		Echvi_1131	0.63	+0.9
1,294,497	+		Echvi_1131	0.64	+0.3
1,294,497	+		Echvi_1131	0.64	+2.5
1,294,498	-		Echvi_1131	0.64	-0.0
1,294,518	-		Echvi_1131	0.67	-2.0
1,294,518	-		Echvi_1131	0.67	-0.6
1,294,523	+		Echvi_1131	0.68	+1.2
1,294,524	-		Echvi_1131	0.68	+0.7
1,294,524	-		Echvi_1131	0.68	+2.1
1,294,532	+		Echvi_1131	0.69	+1.9
1,294,532	+		Echvi_1131	0.69	+0.6
1,294,532	+		Echvi_1131	0.69	+0.7
1,294,532	+		Echvi_1131	0.69	+0.6
1,294,533	-		Echvi_1131	0.69	-1.8
1,294,537	+		Echvi_1131	0.70	-0.2
1,294,538	-		Echvi_1131	0.70	-0.2
1,294,538	-		Echvi_1131	0.70	+0.4
1,294,538	-		Echvi_1131	0.70	-1.4
1,294,538	-		Echvi_1131	0.70	-1.1
1,294,538	-		Echvi_1131	0.70	+0.6
1,294,538	-		Echvi_1131	0.70	+0.0
1,294,538	-		Echvi_1131	0.70	+0.5
1,294,542	+		Echvi_1131	0.71	+0.8
1,294,546	-		Echvi_1131	0.71	+0.6
1,294,555	+		Echvi_1131	0.73	+1.9
1,294,589	-		Echvi_1131	0.78	-0.8
1,294,737	-				-0.5
1,294,737	-				-0.7
1,294,864	-				+0.7
1,294,869	+				+0.7
1,294,869	+				+1.8
1,294,870	-				-1.4
1,294,870	-				-0.3
1,294,870	-				+0.3
1,294,872	-				+0.8
1,294,872	-				+0.3
1,294,872	-				+0.1
1,294,873	+				+0.1
1,294,874	-				+1.1
1,294,874	-				-0.4
1,294,878	+				+0.7
1,294,878	+				+0.8
1,294,879	-				-1.3
1,294,879	-				-0.1
1,294,883	+				+0.1
1,294,893	-				-1.6
1,294,919	-				-1.2
1,294,919	-				-0.5
1,294,921	+				-1.1
1,294,921	+				+0.8
1,294,923	+				+0.2
1,294,924	-				+0.4
1,294,924	-				+0.0
1,294,998	+		Echvi_1132	0.28	-0.5
1,294,999	-		Echvi_1132	0.29	-0.4
1,295,010	+		Echvi_1132	0.32	-1.1
1,295,011	-		Echvi_1132	0.33	+0.5
1,295,011	-		Echvi_1132	0.33	+0.5
1,295,011	-		Echvi_1132	0.33	-0.5
1,295,014	+		Echvi_1132	0.34	-0.3
1,295,015	-		Echvi_1132	0.34	-0.6
1,295,113	-		Echvi_1132	0.66	+0.1
1,295,140	+		Echvi_1132	0.74	-0.7
1,295,141	-		Echvi_1132	0.75	+0.4
1,295,141	-		Echvi_1132	0.75	-0.3
1,295,141	-		Echvi_1132	0.75	+0.2
1,295,141	-		Echvi_1132	0.75	+0.8
1,295,141	-		Echvi_1132	0.75	+1.7
1,295,141	-		Echvi_1132	0.75	+0.6
1,295,141	-		Echvi_1132	0.75	-0.6
1,295,141	-		Echvi_1132	0.75	+1.1
1,295,141	-		Echvi_1132	0.75	-0.3
1,295,160	+		Echvi_1132	0.81	+0.5
1,295,166	-		Echvi_1132	0.83	-0.8
1,295,381	+		Echvi_1133	0.19	+1.2
1,295,382	-		Echvi_1133	0.20	+0.1
1,295,491	+		Echvi_1133	0.41	+0.1
1,295,571	-		Echvi_1133	0.57	-0.2
1,295,579	+		Echvi_1133	0.58	-0.5
1,295,580	-		Echvi_1133	0.58	-1.1
1,295,599	-		Echvi_1133	0.62	+0.5
1,295,603	-		Echvi_1133	0.63	+0.4
1,295,603	-		Echvi_1133	0.63	+0.7
1,295,661	+		Echvi_1133	0.74	+0.0
1,295,661	+		Echvi_1133	0.74	-0.9